PDB Chemical Component 233

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 233

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.534 1.531
C1 O5 1.422 1.426
C1 N1 1.439 1.464
C1 H1 1.114 1.090
C2 C3 1.538 1.532
C2 O2 1.439 1.430
C2 H2 1.115 1.090
C3 C4 1.561 1.532
C3 O3 1.420 1.428
C3 H3 1.114 1.091
C4 C5 1.526 1.530
C4 O4 1.448 1.428
C4 H4 1.115 1.091
C5 C6 1.535 1.530
C5 O5 1.440 1.426
C5 H5 1.114 1.090
C6 O6 1.422 1.429
C6 H9 1.114 1.090
C6 H10 1.116 1.091
O2 H6 0.950 0.967
O3 H7 0.950 0.967
O4 H8 0.950 0.966
O6 H11 0.949 0.966
N1 C7 1.321 1.347
N1 H12 1.020 0.971
O7 C7 1.238 1.212
C7 C8 1.517 1.506
C8 C9 1.545 1.530
C8 H13 1.114 1.090
C8 H14 1.115 1.090
C9 C10 1.528 1.529
C9 H15 1.115 1.089
C9 H16 1.116 1.091
C10 C11 1.512 1.530
C10 H17 1.116 1.090
C10 H18 1.114 1.090
C11 C12 1.537 1.529
C11 H19 1.115 1.090
C11 H20 1.115 1.089
C12 N13 1.462 1.465
C12 H21 1.115 1.090
C12 H22 1.114 1.089
N13 C14 1.316 1.348
N13 H23 1.021 0.970
C14 O15 1.460 1.215
C14 O16 1.447 1.347
O16 C17 1.428 1.452
C17 H24 1.114 1.090
C17 H25 1.115 1.089
C17 H26 1.115 1.089

Bond Angles for 233

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O5 111.7 109.7
C2 C1 N1 108.5 109.5
C2 C1 H1 110.8 109.4
C1 C2 C3 108.1 109.1
C1 C2 O2 107.7 109.5
C1 C2 H2 111.4 109.6
O5 C1 N1 115.1 109.4
O5 C1 H1 103.5 109.4
C1 O5 C5 112.2 107.6
N1 C1 H1 107.0 109.4
C1 N1 C7 122.2 120.1
C1 N1 H12 123.4 120.0
C3 C2 O2 109.4 109.6
C3 C2 H2 109.9 109.5
C2 C3 C4 110.1 108.6
C2 C3 O3 107.9 109.8
C2 C3 H3 109.6 109.6
O2 C2 H2 110.2 109.5
C2 O2 H6 107.7 106.8
C4 C3 O3 108.1 109.6
C4 C3 H3 109.5 109.6
C3 C4 C5 109.8 109.0
C3 C4 O4 108.3 109.6
C3 C4 H4 109.7 109.5
O3 C3 H3 111.6 109.6
C3 O3 H7 107.9 106.8
C5 C4 O4 108.5 109.6
C5 C4 H4 109.5 109.5
C4 C5 C6 115.4 109.4
C4 C5 O5 112.2 109.8
C4 C5 H5 102.1 109.4
O4 C4 H4 111.0 109.5
C4 O4 H8 108.3 106.8
C6 C5 O5 105.5 109.4
C6 C5 H5 109.2 109.4
C5 C6 O6 111.3 109.5
C5 C6 H9 111.5 109.5
C5 C6 H10 111.5 109.4
O5 C5 H5 112.6 109.4
O6 C6 H9 111.6 109.5
O6 C6 H10 111.5 109.4
C6 O6 H11 111.2 106.8
H9 C6 H10 98.9 109.4
C7 N1 H12 114.4 119.9
N1 C7 O7 122.0 120.0
N1 C7 C8 114.8 120.0
O7 C7 C8 123.2 120.0
C7 C8 C9 108.6 109.5
C7 C8 H13 112.6 109.5
C7 C8 H14 112.5 109.5
C9 C8 H13 112.6 109.5
C9 C8 H14 112.5 109.4
C8 C9 C10 113.8 109.5
C8 C9 H15 110.6 109.5
C8 C9 H16 110.6 109.4
H13 C8 H14 97.9 109.5
C10 C9 H15 110.7 109.5
C10 C9 H16 110.6 109.5
C9 C10 C11 111.7 109.5
C9 C10 H17 111.4 109.5
C9 C10 H18 111.4 109.5
H15 C9 H16 99.7 109.4
C11 C10 H17 111.4 109.5
C11 C10 H18 111.4 109.4
C10 C11 C12 113.8 109.5
C10 C11 H19 110.6 109.5
C10 C11 H20 110.6 109.5
H17 C10 H18 99.0 109.5
C12 C11 H19 110.6 109.5
C12 C11 H20 110.6 109.5
C11 C12 N13 109.1 109.5
C11 C12 H21 112.4 109.5
C11 C12 H22 112.4 109.5
H19 C11 H20 99.7 109.4
N13 C12 H21 112.3 109.5
N13 C12 H22 112.4 109.5
C12 N13 C14 129.3 120.0
C12 N13 H23 121.7 120.0
H21 C12 H22 98.1 109.4
C14 N13 H23 109.1 120.0
N13 C14 O15 114.6 120.0
N13 C14 O16 125.3 120.0
O15 C14 O16 120.1 119.9
C14 O16 C17 119.7 120.0
O16 C17 H24 119.7 109.5
O16 C17 H25 108.5 109.5
O16 C17 H26 108.5 109.5
H24 C17 H25 108.6 109.4
H24 C17 H26 108.6 109.5
H25 C17 H26 101.4 109.5

Torsion Angles for 233

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O5 C1 C2 N1 232.1 239.9
O5 C1 C2 H1 114.9 120.1
C2 C1 O5 C5 298.1 292.4
N1 C1 C2 H1 242.8 240.2
C2 C1 N1 C7 147.9 149.9
C2 C1 N1 H12 327.9 329.8
C3 C2 C1 O2 241.9 240.1
C3 C2 C1 H2 120.9 119.9
C1 C2 C3 C4 305.3 306.2
C1 C2 C3 O3 187.6 186.4
C1 C2 C3 H3 65.8 66.0
O2 C2 C1 H2 239.0 239.8
C1 C2 O2 H6 179.9 60.5
C2 C1 O5 N1 124.3 120.1
C2 C1 O5 H1 240.7 240.0
O5 C1 C2 C3 59.5 61.3
O5 C1 C2 O2 177.6 181.2
O5 C1 C2 H2 298.6 301.4
N1 C1 O5 H1 116.4 119.8
O5 C1 N1 C7 273.8 270.2
O5 C1 N1 H12 93.8 90.1
C4 C5 O5 C1 58.8 67.6
C6 C5 O5 C1 185.2 187.7
C1 O5 C5 H5 304.2 307.5
C2 C1 N1 O5 234.1 239.7
C2 C1 N1 H1 119.6 119.8
N1 C1 C2 C3 187.4 181.4
N1 C1 C2 O2 305.6 301.3
N1 C1 C2 H2 66.6 61.5
O5 C1 N1 H1 245.5 240.1
N1 C1 O5 C5 173.9 172.3
C7 N1 C1 H12 180.0 180.1
C1 N1 C7 O7 6.7 359.9
C1 N1 C7 C8 186.3 180.0
C2 C1 H1 O5 119.9 120.2
C2 C1 H1 N1 241.9 240.1
H1 C1 C2 C3 304.6 301.2
H1 C1 C2 O2 62.8 61.1
H1 C1 C2 H2 183.7 181.3
O5 C1 H1 N1 122.0 119.9
H1 C1 O5 C5 57.4 52.5
H1 C1 N1 C7 28.3 30.1
H1 C1 N1 H12 208.3 210.0
C3 C2 C1 O5 59.5 61.3
C3 C2 C1 N1 187.4 181.4
C3 C2 C1 H1 304.6 301.2
C1 C2 C3 O2 117.1 119.9
C1 C2 C3 H2 238.2 240.0
O2 C2 C3 H2 121.1 120.2
C3 C2 O2 H6 297.2 180.1
C4 C3 C2 O3 117.8 119.9
C4 C3 C2 H3 239.5 240.3
C2 C3 C4 C5 52.6 53.7
C2 C3 C4 O4 294.2 293.8
C2 C3 C4 H4 173.0 173.6
O3 C3 C2 H3 121.7 120.4
C2 C3 O3 H7 180.0 299.2
O2 C2 C1 O5 177.6 181.2
O2 C2 C1 N1 305.6 301.3
O2 C2 C1 H1 62.8 61.1
C1 C2 O2 C3 242.7 240.4
C1 C2 O2 H2 121.8 120.2
C3 C2 O2 H2 239.1 239.8
O2 C2 C3 C4 188.3 186.3
O2 C2 C3 O3 70.5 66.5
O2 C2 C3 H3 308.8 306.1
H2 C2 C1 O5 298.6 301.4
H2 C2 C1 N1 66.6 61.5
H2 C2 C1 H1 183.7 181.3
C1 C2 H2 C3 119.8 119.6
C1 C2 H2 O2 240.4 239.8
C3 C2 H2 O2 120.6 120.2
H2 C2 C3 C4 67.2 66.2
H2 C2 C3 O3 309.4 306.3
H2 C2 C3 H3 187.7 185.9
H2 C2 O2 H6 58.2 300.2
C4 C3 C2 O2 188.3 186.3
C4 C3 C2 H2 67.2 66.2
C2 C3 C4 O3 242.4 240.1
C2 C3 C4 H3 120.6 119.7
O3 C3 C4 H3 238.2 239.6
C4 C3 O3 H7 60.9 180.0
C5 C4 C3 O4 118.3 119.9
C5 C4 C3 H4 239.6 240.1
C3 C4 C5 C6 185.6 178.6
C3 C4 C5 O5 306.5 298.7
C3 C4 C5 H5 67.2 58.8
O4 C4 C3 H4 121.2 120.2
C3 C4 O4 H8 180.0 299.6
O3 C3 C2 O2 70.5 66.5
O3 C3 C2 H2 309.4 306.3
C2 C3 O3 C4 119.1 119.2
C2 C3 O3 H3 239.5 239.6
C4 C3 O3 H3 120.4 120.4
O3 C3 C4 C5 170.2 173.6
O3 C3 C4 O4 51.9 53.7
O3 C3 C4 H4 290.6 293.5
H3 C3 C2 O2 308.8 306.1
H3 C3 C2 H2 187.7 185.9
C2 C3 H3 C4 239.1 240.9
C2 C3 H3 O3 119.5 120.5
C4 C3 H3 O3 240.4 239.6
H3 C3 C4 C5 292.0 294.0
H3 C3 C4 O4 173.7 174.1
H3 C3 C4 H4 52.4 53.9
H3 C3 O3 H7 300.5 59.6
C1 O5 C5 C4 58.8 67.6
C5 C4 C3 O3 170.2 173.6
C5 C4 C3 H3 292.0 294.0
C3 C4 C5 O4 241.8 240.0
C3 C4 C5 H4 120.6 119.8
O4 C4 C5 H4 238.7 239.8
C5 C4 O4 H8 60.8 180.0
C6 C5 C4 O5 239.1 239.9
C6 C5 C4 H5 118.4 119.8
C4 C5 C6 O6 190.7 180.3
C4 C5 C6 H9 315.9 300.4
C4 C5 C6 H10 65.4 60.3
O5 C5 C4 H5 239.2 239.9
O4 C4 C3 O3 51.9 53.7
O4 C4 C3 H3 173.7 174.1
C3 C4 O4 C5 119.2 119.6
C3 C4 O4 H4 239.5 239.8
C5 C4 O4 H4 120.4 120.2
O4 C4 C5 C6 303.8 298.6
O4 C4 C5 O5 64.6 58.7
O4 C4 C5 H5 185.4 178.8
H4 C4 C3 O3 290.6 293.5
H4 C4 C3 H3 52.4 53.9
C3 C4 H4 C5 239.4 240.5
C3 C4 H4 O4 119.6 120.3
C5 C4 H4 O4 240.2 239.8
H4 C4 C5 C6 65.0 58.8
H4 C4 C5 O5 185.9 178.9
H4 C4 C5 H5 306.7 299.0
H4 C4 O4 H8 300.5 59.8
C1 O5 C5 C6 185.2 187.7
C6 C5 C4 O4 303.8 298.6
C6 C5 C4 H4 65.0 58.8
C4 C5 C6 O5 124.4 120.4
C4 C5 C6 H5 245.7 240.2
O5 C5 C6 H5 121.3 119.8
O6 C6 C5 H9 234.7 239.9
O6 C6 C5 H10 125.2 119.9
C5 C6 O6 H11 180.0 180.0
H9 C6 C5 H10 250.5 240.0
C5 O5 C1 N1 173.9 172.3
C5 O5 C1 H1 57.4 52.5
O5 C5 C4 O4 64.6 58.7
O5 C5 C4 H4 185.9 178.9
C4 C5 O5 C6 233.6 239.9
C4 C5 O5 H5 114.5 120.1
C6 C5 O5 H5 240.9 240.2
O5 C5 C6 O6 66.2 59.9
O5 C5 C6 H9 191.5 180.0
O5 C5 C6 H10 301.0 300.0
H5 C5 C4 O4 185.4 178.8
H5 C5 C4 H4 306.7 299.0
C4 C5 H5 C6 122.7 119.8
C4 C5 H5 O5 239.5 239.6
C6 C5 H5 O5 116.9 119.9
H5 C5 C6 O6 305.0 300.1
H5 C5 C6 H9 70.3 60.2
H5 C5 C6 H10 179.8 180.1
O6 C6 C5 O5 66.2 59.9
O6 C6 C5 H5 305.0 300.1
C5 C6 O6 H9 125.3 120.1
C5 C6 O6 H10 234.8 240.1
H9 C6 O6 H10 109.5 120.0
H9 C6 C5 O5 191.5 180.0
H9 C6 C5 H5 70.3 60.2
C5 C6 H9 O6 234.9 239.9
C5 C6 H9 H10 117.4 119.9
O6 C6 H9 H10 242.5 240.0
H9 C6 O6 H11 54.8 59.9
H10 C6 C5 O5 301.0 300.0
H10 C6 C5 H5 179.8 180.1
C5 C6 H10 O6 125.1 120.0
C5 C6 H10 H9 242.6 240.0
O6 C6 H10 H9 117.5 120.0
H10 C6 O6 H11 305.3 300.0
H6 O2 C2 H2 58.2 300.2
H7 O3 C3 H3 300.5 59.6
H8 O4 C4 H4 300.5 59.8
H11 O6 C6 H9 54.8 59.9
H11 O6 C6 H10 305.3 300.0
C7 N1 C1 H1 28.3 30.1
C1 N1 C7 H12 180.0 179.9
O7 C7 N1 C8 180.4 179.9
N1 C7 C8 C9 89.9 180.0
N1 C7 C8 H13 215.2 60.0
N1 C7 C8 H14 324.6 299.9
H12 N1 C1 H1 208.3 210.0
C1 N1 H12 C7 180.0 180.1
H12 N1 C7 O7 186.7 180.0
H12 N1 C7 C8 6.3 0.1
O7 C7 N1 H12 186.7 180.0
N1 C7 O7 C8 179.6 180.1
O7 C7 C8 C9 269.5 0.1
O7 C7 C8 H13 34.8 240.1
O7 C7 C8 H14 144.2 120.0
C8 C7 N1 H12 6.3 0.1
N1 C7 C8 O7 180.4 179.9
C9 C8 C7 H13 234.7 120.0
C9 C8 C7 H14 125.3 240.1
C7 C8 C9 C10 41.0 180.0
C7 C8 C9 H15 166.3 59.9
C7 C8 C9 H16 275.8 300.0
H13 C8 C7 H14 250.6 120.1
C7 C8 C9 H13 125.3 240.0
C7 C8 C9 H14 234.7 120.0
H13 C8 C9 H14 109.4 240.0
C10 C9 C8 H15 234.7 120.1
C10 C9 C8 H16 125.2 240.0
C8 C9 C10 C11 156.3 180.0
C8 C9 C10 H17 281.5 59.9
C8 C9 C10 H18 31.0 299.9
H15 C9 C8 H16 250.6 119.9
C7 C8 H13 C9 236.9 120.0
C7 C8 H13 H14 118.4 240.0
C9 C8 H13 H14 241.6 119.9
H13 C8 C9 C10 275.7 300.0
H13 C8 C9 H15 41.0 180.0
H13 C8 C9 H16 150.4 60.0
C7 C8 H14 C9 123.1 240.0
C7 C8 H14 H13 241.5 120.0
C9 C8 H14 H13 118.5 240.0
H14 C8 C9 C10 166.3 60.0
H14 C8 C9 H15 291.6 300.0
H14 C8 C9 H16 41.0 180.0
C10 C9 C8 H13 275.7 300.0
C10 C9 C8 H14 166.3 60.0
C8 C9 C10 H15 125.3 239.9
C8 C9 C10 H16 234.7 119.9
H15 C9 C10 H16 109.5 240.0
C11 C10 C9 H17 234.7 120.0
C11 C10 C9 H18 125.3 240.0
C9 C10 C11 C12 122.0 180.0
C9 C10 C11 H19 247.3 59.9
C9 C10 C11 H20 356.8 300.0
H17 C10 C9 H18 250.5 120.0
H15 C9 C8 H13 41.0 180.0
H15 C9 C8 H14 291.6 300.0
C8 C9 H15 C10 232.9 120.1
C8 C9 H15 H16 116.5 240.1
C10 C9 H15 H16 243.5 120.0
H15 C9 C10 C11 31.0 300.0
H15 C9 C10 H17 156.2 180.0
H15 C9 C10 H18 265.7 60.0
H16 C9 C8 H13 150.4 60.0
H16 C9 C8 H14 41.0 180.0
C8 C9 H16 C10 127.0 240.0
C8 C9 H16 H15 243.6 120.0
C10 C9 H16 H15 116.5 240.0
H16 C9 C10 C11 281.5 60.0
H16 C9 C10 H17 46.8 300.0
H16 C9 C10 H18 156.2 180.0
C11 C10 C9 H15 31.0 300.0
C11 C10 C9 H16 281.5 60.0
C9 C10 C11 H17 125.2 239.9
C9 C10 C11 H18 234.7 120.0
H17 C10 C11 H18 109.5 240.1
C12 C11 C10 H19 234.7 120.0
C12 C11 C10 H20 125.2 239.9
C10 C11 C12 N13 227.4 180.0
C10 C11 C12 H21 352.6 60.0
C10 C11 C12 H22 102.1 300.0
H19 C11 C10 H20 250.5 119.9
H17 C10 C9 H15 156.2 180.0
H17 C10 C9 H16 46.8 300.0
C9 C10 H17 C11 234.6 120.1
C9 C10 H17 H18 117.3 240.0
C11 C10 H17 H18 242.7 119.9
H17 C10 C11 C12 356.8 300.0
H17 C10 C11 H19 122.1 180.0
H17 C10 C11 H20 231.6 60.1
H18 C10 C9 H15 265.7 60.0
H18 C10 C9 H16 156.2 180.0
C9 C10 H18 C11 125.4 240.0
C9 C10 H18 H17 242.7 120.0
C11 C10 H18 H17 117.3 240.0
H18 C10 C11 C12 247.3 60.0
H18 C10 C11 H19 12.6 299.9
H18 C10 C11 H20 122.1 180.0
C12 C11 C10 H17 356.8 300.0
C12 C11 C10 H18 247.3 60.0
C10 C11 C12 H19 125.3 240.0
C10 C11 C12 H20 234.8 120.0
H19 C11 C12 H20 109.5 240.1
N13 C12 C11 H21 234.8 120.0
N13 C12 C11 H22 125.3 240.0
C11 C12 N13 C14 282.5 180.0
C11 C12 N13 H23 102.5 360.0
H21 C12 C11 H22 250.5 119.9
H19 C11 C10 H17 122.1 180.0
H19 C11 C10 H18 12.6 299.9
C10 C11 H19 C12 232.9 120.1
C10 C11 H19 H20 116.5 240.1
C12 C11 H19 H20 243.5 120.0
H19 C11 C12 N13 102.1 300.0
H19 C11 C12 H21 227.3 180.0
H19 C11 C12 H22 336.8 60.1
H20 C11 C10 H17 231.6 60.1
H20 C11 C10 H18 122.1 180.0
C10 C11 H20 C12 127.1 239.9
C10 C11 H20 H19 243.5 119.9
C12 C11 H20 H19 116.5 240.0
H20 C11 C12 N13 352.6 60.0
H20 C11 C12 H21 117.8 299.9
H20 C11 C12 H22 227.3 180.0
N13 C12 C11 H19 102.1 300.0
N13 C12 C11 H20 352.6 60.0
C11 C12 N13 H21 125.3 240.0
C11 C12 N13 H22 234.7 120.1
H21 C12 N13 H22 109.4 240.1
C14 N13 C12 H23 180.0 180.1
C12 N13 C14 O15 176.0 359.9
C12 N13 C14 O16 352.9 180.0
H21 C12 C11 H19 227.3 180.0
H21 C12 C11 H20 117.8 299.9
C11 C12 H21 N13 236.6 120.1
C11 C12 H21 H22 118.3 240.0
N13 C12 H21 H22 241.7 119.9
H21 C12 N13 C14 157.3 300.1
H21 C12 N13 H23 337.3 120.0
H22 C12 C11 H19 336.8 60.1
H22 C12 C11 H20 227.3 180.0
C11 C12 H22 N13 123.5 239.9
C11 C12 H22 H21 241.7 120.0
N13 C12 H22 H21 118.2 240.1
H22 C12 N13 C14 47.8 60.0
H22 C12 N13 H23 227.8 239.9
C14 N13 C12 H21 157.3 300.1
C14 N13 C12 H22 47.8 60.0
C12 N13 C14 H23 180.0 179.9
O15 C14 N13 O16 183.1 179.9
N13 C14 O16 C17 69.0 180.0
H23 N13 C12 H21 337.3 120.0
H23 N13 C12 H22 227.8 239.9
C12 N13 H23 C14 180.0 180.1
H23 N13 C14 O15 356.0 180.0
H23 N13 C14 O16 172.9 0.1
O15 C14 N13 H23 356.0 180.0
N13 C14 O15 O16 177.1 180.1
O15 C14 O16 C17 245.7 0.1
O16 C14 N13 H23 172.9 0.1
N13 C14 O16 O15 183.2 179.9
C14 O16 C17 H24 180.0 180.0
C14 O16 C17 H25 305.3 299.9
C14 O16 C17 H26 54.7 60.0
H24 C17 O16 H25 234.7 240.1
H24 C17 O16 H26 125.3 120.0
H25 C17 O16 H26 250.6 240.0
O16 C17 H24 H25 125.3 120.0
O16 C17 H24 H26 234.8 240.0
H25 C17 H24 H26 109.5 120.0
O16 C17 H25 H24 228.4 240.1
O16 C17 H25 H26 114.2 120.0
H24 C17 H25 H26 245.7 240.0
O16 C17 H26 H24 131.5 120.0
O16 C17 H26 H25 245.8 240.0
H24 C17 H26 H25 114.3 120.0