PDB Chemical Component 22U
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 22U
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.542 |
1.530 |
| C1 |
C16 |
1.538 |
1.506 |
| N1 |
C2 |
1.496 |
1.469 |
| C2 |
C3 |
1.525 |
1.506 |
| C3 |
O1 |
1.237 |
1.213 |
| C3 |
N2 |
1.346 |
1.348 |
| N2 |
C4 |
1.475 |
1.474 |
| N2 |
C7 |
1.456 |
1.470 |
| C4 |
C5 |
1.545 |
1.549 |
| C5 |
C6 |
1.555 |
1.551 |
| C6 |
C7 |
1.552 |
1.543 |
| C7 |
C8 |
1.515 |
1.507 |
| C8 |
N3 |
1.360 |
1.348 |
| C8 |
O2 |
1.225 |
1.213 |
| N3 |
C9 |
1.479 |
1.466 |
| C9 |
C10 |
1.542 |
1.506 |
| C10 |
C11 |
1.407 |
1.381 |
| C10 |
C15 |
1.384 |
1.383 |
| C11 |
C12 |
1.399 |
1.384 |
| C12 |
C13 |
1.398 |
1.383 |
| C12 |
CL1 |
1.755 |
1.736 |
| C13 |
C14 |
1.394 |
1.382 |
| C14 |
C15 |
1.388 |
1.382 |
| C16 |
C17 |
1.404 |
1.382 |
| C16 |
C21 |
1.400 |
1.383 |
| C17 |
C18 |
1.403 |
1.382 |
| C18 |
C19 |
1.388 |
1.383 |
| C19 |
C20 |
1.411 |
1.382 |
| C20 |
C21 |
1.395 |
1.382 |
| C1 |
H1 |
1.100 |
1.090 |
| C1 |
H1A |
1.100 |
1.091 |
| N1 |
HN1 |
1.000 |
1.009 |
| N1 |
HN1A |
1.000 |
1.009 |
| C2 |
H2 |
1.100 |
1.090 |
| C4 |
H4 |
1.100 |
1.090 |
| C4 |
H4A |
1.100 |
1.091 |
| C5 |
H5 |
1.100 |
1.090 |
| C5 |
H5A |
1.100 |
1.090 |
| C6 |
H6 |
1.100 |
1.091 |
| C6 |
H6A |
1.100 |
1.090 |
| C7 |
H7 |
1.100 |
1.090 |
| N3 |
HN3 |
1.000 |
0.969 |
| C9 |
H9 |
1.101 |
1.090 |
| C9 |
H9A |
1.099 |
1.090 |
| C11 |
H11 |
1.081 |
1.080 |
| C13 |
H13 |
1.080 |
1.081 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
H15 |
1.080 |
1.080 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
H18 |
1.080 |
1.080 |
| C19 |
H19 |
1.080 |
1.081 |
| C20 |
H20 |
1.080 |
1.080 |
| C21 |
H21 |
1.080 |
1.080 |
Bond Angles for 22U
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
H2 |
107.2 |
109.5 |
| C1 |
C16 |
C17 |
122.3 |
120.0 |
| C1 |
C16 |
C21 |
118.9 |
120.0 |
| C16 |
C1 |
H1 |
108.6 |
109.5 |
| C16 |
C1 |
H1A |
108.6 |
109.5 |
| N1 |
C2 |
C3 |
108.3 |
109.5 |
| C2 |
N1 |
HN1 |
109.5 |
111.1 |
| C2 |
N1 |
HN1A |
109.5 |
110.9 |
| N1 |
C2 |
H2 |
109.7 |
109.4 |
| C2 |
C3 |
O1 |
115.9 |
120.0 |
| C2 |
C3 |
N2 |
122.6 |
120.0 |
| C3 |
C2 |
H2 |
109.9 |
109.5 |
| O1 |
C3 |
N2 |
120.2 |
120.0 |
| C3 |
N2 |
C4 |
124.4 |
125.6 |
| C3 |
N2 |
C7 |
119.6 |
125.7 |
| C7 |
N2 |
C4 |
116.0 |
108.7 |
| N2 |
C4 |
C5 |
99.0 |
104.9 |
| N2 |
C4 |
H4 |
113.2 |
110.4 |
| N2 |
C4 |
H4A |
113.1 |
110.3 |
| N2 |
C7 |
C8 |
111.6 |
109.9 |
| N2 |
C7 |
H7 |
113.8 |
109.9 |
| C4 |
C5 |
H5 |
111.9 |
111.0 |
| C4 |
C5 |
H5A |
111.8 |
111.1 |
| C5 |
C6 |
H6 |
111.6 |
110.7 |
| C5 |
C6 |
H6A |
111.7 |
110.7 |
| C6 |
C7 |
H7 |
114.5 |
109.8 |
| C7 |
C8 |
N3 |
117.0 |
120.0 |
| C7 |
C8 |
O2 |
120.8 |
120.0 |
| C8 |
C7 |
H7 |
104.8 |
110.0 |
| O2 |
C8 |
N3 |
122.2 |
120.0 |
| C8 |
N3 |
C9 |
117.8 |
120.0 |
| C8 |
N3 |
HN3 |
121.1 |
120.0 |
| N3 |
C9 |
C10 |
109.5 |
109.5 |
| C9 |
N3 |
HN3 |
121.1 |
120.0 |
| N3 |
C9 |
H9 |
109.5 |
109.4 |
| N3 |
C9 |
H9A |
109.5 |
109.5 |
| C9 |
C10 |
C11 |
121.9 |
120.0 |
| C9 |
C10 |
C15 |
118.5 |
120.0 |
| C10 |
C9 |
H9 |
109.4 |
109.5 |
| C10 |
C9 |
H9A |
109.5 |
109.5 |
| C15 |
C10 |
C11 |
119.6 |
120.0 |
| C10 |
C11 |
C12 |
119.6 |
120.0 |
| C10 |
C11 |
H11 |
120.2 |
120.0 |
| C10 |
C15 |
H15 |
119.6 |
120.0 |
| C11 |
C12 |
CL1 |
121.0 |
120.0 |
| C12 |
C13 |
H13 |
120.2 |
120.0 |
| C13 |
C14 |
H14 |
120.0 |
120.0 |
| C14 |
C15 |
H15 |
119.5 |
120.0 |
| C17 |
C16 |
C21 |
118.8 |
120.0 |
| C16 |
C17 |
C18 |
119.5 |
120.1 |
| C16 |
C17 |
H17 |
120.3 |
120.0 |
| C16 |
C21 |
H21 |
118.9 |
120.0 |
| C17 |
C18 |
C19 |
120.9 |
120.0 |
| C18 |
C17 |
H17 |
120.2 |
119.9 |
| C17 |
C18 |
H18 |
119.5 |
120.0 |
| C18 |
C19 |
C20 |
120.1 |
120.0 |
| C19 |
C18 |
H18 |
119.5 |
120.0 |
| C18 |
C19 |
H19 |
120.0 |
120.0 |
| C19 |
C20 |
H20 |
121.0 |
120.0 |
| C20 |
C21 |
H21 |
118.9 |
120.0 |
| H1 |
C1 |
H1A |
110.3 |
109.4 |
| HN1 |
N1 |
HN1A |
109.5 |
111.0 |
| H4 |
C4 |
H4A |
105.6 |
110.4 |
| H5 |
C5 |
H5A |
107.0 |
110.9 |
| H6 |
C6 |
H6A |
107.2 |
110.8 |
| H9 |
C9 |
H9A |
109.5 |
109.5 |
Torsion Angles for 22U
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
N1 |
HN1 |
180.0 |
296.1 |
| C1 |
C2 |
N1 |
HN1A |
300.0 |
60.1 |
| N1 |
C2 |
C1 |
H2 |
119.8 |
119.9 |
| C1 |
C2 |
C3 |
N2 |
117.6 |
80.0 |
| C3 |
C2 |
C1 |
H2 |
240.1 |
240.0 |
| C16 |
C1 |
C2 |
H2 |
56.7 |
305.0 |
| C17 |
C16 |
C1 |
C21 |
180.9 |
180.3 |
| C1 |
C16 |
C17 |
C18 |
180.6 |
180.0 |
| C1 |
C16 |
C17 |
H17 |
0.5 |
0.0 |
| C1 |
C16 |
C21 |
H21 |
356.7 |
360.0 |
| H1 |
C1 |
C16 |
H1A |
120.0 |
120.0 |
| C1 |
C2 |
N1 |
H2 |
241.7 |
240.0 |
| N1 |
C2 |
C3 |
O1 |
46.4 |
20.0 |
| N1 |
C2 |
C3 |
N2 |
239.6 |
200.0 |
| C3 |
C2 |
N1 |
H2 |
120.0 |
120.0 |
| HN1 |
N1 |
C2 |
HN1A |
240.0 |
236.1 |
| C1 |
C2 |
C3 |
H2 |
118.3 |
120.0 |
| C3 |
C2 |
N1 |
HN1 |
58.3 |
176.1 |
| C3 |
C2 |
N1 |
HN1A |
178.3 |
300.0 |
| N1 |
C2 |
C3 |
H2 |
240.2 |
240.0 |
| O1 |
C3 |
C2 |
N2 |
166.8 |
180.0 |
| C2 |
C3 |
N2 |
C4 |
354.2 |
360.0 |
| C2 |
C3 |
N2 |
C7 |
175.1 |
179.8 |
| C2 |
C3 |
O1 |
N2 |
192.8 |
180.0 |
| O1 |
C3 |
C2 |
H2 |
166.2 |
140.0 |
| O1 |
C3 |
N2 |
C4 |
187.9 |
180.0 |
| O1 |
C3 |
N2 |
C7 |
8.8 |
359.7 |
| C2 |
C3 |
N2 |
O1 |
166.3 |
180.0 |
| N2 |
C3 |
C2 |
H2 |
359.4 |
320.0 |
| C7 |
N2 |
C3 |
C4 |
181.0 |
179.8 |
| C3 |
N2 |
C4 |
C5 |
204.5 |
204.1 |
| C3 |
N2 |
C4 |
H4 |
324.5 |
323.0 |
| C3 |
N2 |
C4 |
H4A |
84.5 |
85.3 |
| C3 |
N2 |
C7 |
C8 |
298.9 |
298.4 |
| C3 |
N2 |
C7 |
H7 |
57.3 |
59.5 |
| C3 |
N2 |
C4 |
C7 |
180.9 |
179.8 |
| C4 |
N2 |
C7 |
C8 |
119.8 |
118.2 |
| C4 |
N2 |
C7 |
H7 |
238.2 |
239.3 |
| N2 |
C4 |
C5 |
H5 |
81.7 |
81.1 |
| N2 |
C4 |
C5 |
H5A |
201.7 |
204.9 |
| H4 |
C4 |
N2 |
H4A |
240.0 |
237.7 |
| C3 |
N2 |
C7 |
C4 |
179.1 |
180.2 |
| C7 |
N2 |
C4 |
C5 |
23.6 |
24.3 |
| C7 |
N2 |
C4 |
H4 |
143.6 |
143.2 |
| C7 |
N2 |
C4 |
H4A |
263.6 |
265.5 |
| C6 |
C7 |
N2 |
H7 |
123.4 |
119.3 |
| N2 |
C7 |
C8 |
N3 |
137.6 |
180.0 |
| N2 |
C7 |
C8 |
O2 |
318.0 |
360.0 |
| C8 |
C7 |
N2 |
H7 |
241.6 |
238.8 |
| N2 |
C4 |
C5 |
H4 |
120.0 |
118.9 |
| N2 |
C4 |
C5 |
H4A |
240.0 |
241.2 |
| C4 |
C5 |
C6 |
H6 |
161.4 |
153.8 |
| C4 |
C5 |
C6 |
H6A |
281.4 |
277.1 |
| H5 |
C5 |
C4 |
H5A |
240.0 |
236.2 |
| N2 |
C4 |
C5 |
C6 |
321.7 |
323.0 |
| C5 |
C6 |
C7 |
H7 |
96.6 |
97.5 |
| H6 |
C6 |
C5 |
H6A |
240.0 |
236.7 |
| C6 |
C7 |
N2 |
C4 |
1.7 |
358.7 |
| N2 |
C7 |
C6 |
H7 |
237.0 |
240.6 |
| C6 |
C7 |
C8 |
N3 |
249.9 |
297.9 |
| C8 |
C7 |
C6 |
H7 |
118.3 |
121.2 |
| C8 |
C7 |
N2 |
C4 |
119.8 |
118.2 |
| N2 |
C7 |
C8 |
H7 |
123.6 |
121.1 |
| C6 |
C7 |
C8 |
H7 |
236.0 |
238.9 |
| O2 |
C8 |
C7 |
N3 |
180.4 |
179.9 |
| C7 |
C8 |
N3 |
C9 |
174.4 |
180.0 |
| C7 |
C8 |
N3 |
HN3 |
354.4 |
360.0 |
| C7 |
C8 |
N3 |
O2 |
180.4 |
179.9 |
| N3 |
C8 |
C7 |
H7 |
14.0 |
59.0 |
| C8 |
N3 |
C9 |
C10 |
117.4 |
180.0 |
| C9 |
N3 |
C8 |
HN3 |
180.0 |
180.1 |
| C8 |
N3 |
C9 |
H9 |
237.4 |
300.0 |
| C8 |
N3 |
C9 |
H9A |
357.4 |
60.0 |
| C7 |
C8 |
O2 |
N3 |
179.6 |
180.1 |
| O2 |
C8 |
C7 |
H7 |
194.4 |
238.9 |
| O2 |
C8 |
N3 |
C9 |
354.0 |
0.1 |
| O2 |
C8 |
N3 |
HN3 |
174.0 |
180.0 |
| C8 |
N3 |
C9 |
HN3 |
180.0 |
179.9 |
| N3 |
C9 |
C10 |
C11 |
68.7 |
90.0 |
| N3 |
C9 |
C10 |
C15 |
248.2 |
269.7 |
| C10 |
C9 |
N3 |
H9 |
240.0 |
240.0 |
| C10 |
C9 |
N3 |
H9A |
120.0 |
120.0 |
| H9 |
C9 |
N3 |
H9A |
240.0 |
240.0 |
| C10 |
C9 |
N3 |
HN3 |
297.4 |
0.0 |
| N3 |
C9 |
C10 |
H9 |
120.0 |
119.9 |
| N3 |
C9 |
C10 |
H9A |
240.0 |
240.0 |
| C15 |
C10 |
C9 |
C11 |
179.6 |
179.7 |
| C9 |
C10 |
C11 |
C12 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
H11 |
0.0 |
359.9 |
| C9 |
C10 |
C15 |
H15 |
358.9 |
0.0 |
| H9 |
C9 |
C10 |
H9A |
120.0 |
120.1 |
| C9 |
C10 |
C11 |
C15 |
179.6 |
179.7 |
| C11 |
C10 |
C9 |
H9 |
308.6 |
330.0 |
| C11 |
C10 |
C9 |
H9A |
188.7 |
210.0 |
| C11 |
C10 |
C15 |
H15 |
178.5 |
179.7 |
| C10 |
C11 |
C12 |
CL1 |
179.6 |
180.0 |
| C9 |
C10 |
C15 |
C11 |
180.4 |
180.3 |
| C15 |
C10 |
C9 |
H9 |
128.2 |
149.7 |
| C15 |
C10 |
C9 |
H9A |
8.2 |
29.7 |
| C15 |
C10 |
C11 |
C12 |
0.4 |
0.3 |
| C15 |
C10 |
C11 |
H11 |
180.4 |
180.2 |
| C14 |
C15 |
C10 |
H15 |
180.0 |
179.7 |
| C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
H13 |
181.1 |
180.0 |
| C10 |
C11 |
C12 |
C13 |
359.7 |
360.0 |
| C12 |
C13 |
C14 |
H14 |
177.9 |
180.0 |
| CL1 |
C12 |
C13 |
H13 |
1.2 |
360.0 |
| C13 |
C14 |
C15 |
H15 |
182.4 |
180.3 |
| C14 |
C15 |
C10 |
C11 |
358.5 |
359.5 |
| C10 |
C15 |
C14 |
H15 |
180.0 |
180.3 |
| C1 |
C16 |
C17 |
C21 |
179.1 |
179.7 |
| C17 |
C16 |
C1 |
H1 |
181.3 |
330.0 |
| C17 |
C16 |
C1 |
H1A |
61.3 |
210.0 |
| C17 |
C16 |
C21 |
H21 |
175.8 |
179.7 |
| C16 |
C17 |
C18 |
C19 |
357.5 |
0.0 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
| C16 |
C17 |
C18 |
H18 |
177.5 |
180.0 |
| C1 |
C16 |
C21 |
C17 |
180.9 |
180.3 |
| C21 |
C16 |
C1 |
H1 |
0.4 |
149.7 |
| C21 |
C16 |
C1 |
H1A |
240.4 |
29.7 |
| C21 |
C16 |
C17 |
C18 |
1.5 |
0.3 |
| C21 |
C16 |
C17 |
H17 |
181.5 |
180.3 |
| C20 |
C21 |
C16 |
H21 |
180.0 |
179.8 |
| C18 |
C17 |
C16 |
C21 |
1.5 |
0.3 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
| C17 |
C18 |
C19 |
C20 |
6.1 |
359.9 |
| C19 |
C18 |
C17 |
H18 |
180.0 |
180.0 |
| C17 |
C18 |
C19 |
H19 |
186.1 |
180.0 |
| C19 |
C18 |
C17 |
H17 |
177.5 |
180.0 |
| C17 |
C18 |
C19 |
H18 |
180.0 |
180.0 |
| C18 |
C19 |
C20 |
H20 |
171.6 |
180.0 |
| C20 |
C19 |
C18 |
H18 |
186.1 |
179.9 |
| C18 |
C19 |
C20 |
H19 |
180.0 |
180.1 |
| C19 |
C20 |
C21 |
H21 |
187.6 |
180.2 |
| C16 |
C21 |
C20 |
H21 |
180.0 |
180.2 |
| H1 |
C1 |
C2 |
H2 |
176.7 |
65.0 |
| H1 |
C1 |
C16 |
C17 |
181.3 |
330.0 |
| H1 |
C1 |
C16 |
C21 |
0.4 |
149.7 |
| C16 |
C1 |
H1 |
H1A |
241.1 |
240.0 |
| H1A |
C1 |
C2 |
H2 |
296.6 |
185.0 |
| H1A |
C1 |
C16 |
C17 |
61.3 |
210.0 |
| H1A |
C1 |
C16 |
C21 |
240.4 |
29.7 |
| C16 |
C1 |
H1A |
H1 |
118.9 |
120.0 |
| HN1 |
N1 |
C2 |
C3 |
58.3 |
176.1 |
| C2 |
N1 |
HN1 |
HN1A |
120.0 |
123.9 |
| HN1 |
N1 |
C2 |
H2 |
298.3 |
56.1 |
| HN1A |
N1 |
C2 |
C3 |
178.3 |
300.0 |
| C2 |
N1 |
HN1A |
HN1 |
240.0 |
236.0 |
| HN1A |
N1 |
C2 |
H2 |
58.3 |
180.0 |
| N1 |
C2 |
H2 |
C3 |
119.0 |
120.0 |
| H2 |
C2 |
N1 |
HN1 |
298.3 |
56.1 |
| H2 |
C2 |
N1 |
HN1A |
58.3 |
180.0 |
| H2 |
C2 |
C3 |
O1 |
166.2 |
140.0 |
| H2 |
C2 |
C3 |
N2 |
359.4 |
320.0 |
| N2 |
C4 |
H4 |
C5 |
248.4 |
244.5 |
| N2 |
C4 |
H4 |
H4A |
124.2 |
122.3 |
| H4 |
C4 |
C5 |
H5 |
321.7 |
322.2 |
| H4 |
C4 |
C5 |
H5A |
81.6 |
86.0 |
| N2 |
C4 |
H4A |
C5 |
111.5 |
115.4 |
| N2 |
C4 |
H4A |
H4 |
235.8 |
237.7 |
| H4A |
C4 |
C5 |
H5 |
201.7 |
199.9 |
| H4A |
C4 |
C5 |
H5A |
321.7 |
323.7 |
| C4 |
C5 |
H5 |
H5A |
122.8 |
123.9 |
| H5 |
C5 |
C6 |
H6 |
41.4 |
35.8 |
| H5 |
C5 |
C6 |
H6A |
161.4 |
159.0 |
| C4 |
C5 |
H5A |
H5 |
237.2 |
236.1 |
| H5A |
C5 |
C6 |
H6 |
281.4 |
271.9 |
| H5A |
C5 |
C6 |
H6A |
41.4 |
35.2 |
| C5 |
C6 |
H6 |
H6A |
122.6 |
123.3 |
| H6 |
C6 |
C7 |
H7 |
336.6 |
339.0 |
| C5 |
C6 |
H6A |
H6 |
237.4 |
236.8 |
| H6A |
C6 |
C7 |
H7 |
216.6 |
215.8 |
| H7 |
C7 |
N2 |
C4 |
238.2 |
239.3 |
| N2 |
C7 |
H7 |
C8 |
237.8 |
238.9 |
| H7 |
C7 |
C8 |
N3 |
14.0 |
59.0 |
| H7 |
C7 |
C8 |
O2 |
194.4 |
238.9 |
| C8 |
N3 |
HN3 |
C9 |
180.0 |
180.1 |
| HN3 |
N3 |
C9 |
C10 |
297.4 |
0.0 |
| HN3 |
N3 |
C9 |
H9 |
57.4 |
120.0 |
| HN3 |
N3 |
C9 |
H9A |
177.4 |
240.0 |
| N3 |
C9 |
H9 |
C10 |
240.0 |
240.0 |
| H9 |
C9 |
N3 |
HN3 |
57.4 |
120.0 |
| N3 |
C9 |
H9 |
H9A |
120.0 |
120.0 |
| H9 |
C9 |
C10 |
C11 |
308.6 |
330.0 |
| H9 |
C9 |
C10 |
C15 |
128.2 |
149.7 |
| C10 |
C9 |
H9 |
H9A |
240.0 |
239.9 |
| N3 |
C9 |
H9A |
C10 |
120.0 |
120.0 |
| H9A |
C9 |
N3 |
HN3 |
177.4 |
240.0 |
| N3 |
C9 |
H9A |
H9 |
240.0 |
240.0 |
| H9A |
C9 |
C10 |
C11 |
188.7 |
210.0 |
| H9A |
C9 |
C10 |
C15 |
8.2 |
29.7 |
| C10 |
C9 |
H9A |
H9 |
120.0 |
120.1 |
| C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
| H11 |
C11 |
C12 |
CL1 |
359.6 |
0.0 |
| H13 |
C13 |
C14 |
H14 |
357.9 |
0.1 |
| H14 |
C14 |
C15 |
H15 |
2.4 |
360.0 |
| H15 |
C15 |
C10 |
C11 |
178.5 |
179.7 |
| H17 |
C17 |
C16 |
C21 |
181.5 |
180.3 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
| H17 |
C17 |
C18 |
C19 |
177.5 |
180.0 |
| H17 |
C17 |
C18 |
H18 |
357.5 |
360.0 |
| C17 |
C18 |
H18 |
C19 |
180.0 |
180.0 |
| H18 |
C18 |
C17 |
H17 |
357.5 |
360.0 |
| H18 |
C18 |
C19 |
C20 |
186.1 |
179.9 |
| H18 |
C18 |
C19 |
H19 |
6.1 |
0.0 |
| C18 |
C19 |
H19 |
C20 |
180.0 |
179.9 |
| H19 |
C19 |
C18 |
H18 |
6.1 |
0.0 |
| H19 |
C19 |
C20 |
H20 |
351.5 |
359.9 |
| H20 |
C20 |
C21 |
H21 |
7.6 |
0.1 |