PDB Chemical Component 21Z
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 21Z
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C07 |
N01 |
1.322 |
1.302 |
| N01 |
C06 |
1.393 |
1.312 |
| C09 |
N02 |
1.307 |
1.398 |
| N02 |
C07 |
1.295 |
1.377 |
| N02 |
HN02 |
1.001 |
0.970 |
| C06 |
N03 |
1.270 |
1.385 |
| N03 |
HN03 |
1.000 |
0.970 |
| N03 |
HN0A |
1.000 |
0.970 |
| S25 |
N04 |
1.685 |
1.655 |
| N04 |
HN04 |
1.000 |
0.971 |
| N04 |
HN0B |
1.000 |
0.970 |
| S24 |
C05 |
1.718 |
1.763 |
| C05 |
C08 |
1.402 |
1.407 |
| C05 |
C06 |
1.402 |
1.383 |
| S24 |
C07 |
1.735 |
1.709 |
| C10 |
C08 |
1.391 |
1.479 |
| C08 |
O21 |
1.223 |
1.220 |
| C15 |
C09 |
1.444 |
1.389 |
| C11 |
C09 |
1.419 |
1.390 |
| C16 |
C10 |
1.435 |
1.396 |
| C20 |
C10 |
1.428 |
1.396 |
| C12 |
C11 |
1.413 |
1.380 |
| C11 |
H11 |
1.080 |
1.080 |
| C13 |
C12 |
1.421 |
1.383 |
| S25 |
C12 |
1.780 |
1.762 |
| C13 |
C14 |
1.424 |
1.382 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
C15 |
1.427 |
1.381 |
| C14 |
H14 |
1.080 |
1.081 |
| C15 |
H15 |
1.080 |
1.080 |
| C17 |
C16 |
1.423 |
1.380 |
| C16 |
H16 |
1.080 |
1.080 |
| C18 |
C17 |
1.417 |
1.385 |
| C17 |
H17 |
1.080 |
1.079 |
| C18 |
C19 |
1.421 |
1.383 |
| C18 |
H18 |
1.080 |
1.080 |
| C19 |
C20 |
1.425 |
1.379 |
| C19 |
H19 |
1.080 |
1.080 |
| C20 |
H20 |
1.080 |
1.079 |
| O22 |
S25 |
1.457 |
1.421 |
| O23 |
S25 |
1.461 |
1.421 |
Bond Angles for 21Z
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N01 |
C06 |
N03 |
121.5 |
123.2 |
| N01 |
C06 |
C05 |
116.0 |
113.6 |
| C09 |
N02 |
HN02 |
115.8 |
120.0 |
| C07 |
N02 |
HN02 |
115.8 |
120.1 |
| C06 |
N03 |
HN03 |
109.5 |
120.0 |
| C06 |
N03 |
HN0A |
109.5 |
120.0 |
| HN03 |
N03 |
HN0A |
109.4 |
120.0 |
| S25 |
N04 |
HN04 |
109.5 |
120.0 |
| S25 |
N04 |
HN0B |
109.5 |
120.0 |
| HN04 |
N04 |
HN0B |
109.5 |
120.0 |
| C06 |
C05 |
C08 |
126.0 |
126.2 |
| C05 |
C08 |
O21 |
119.6 |
119.9 |
| C10 |
C08 |
O21 |
118.8 |
120.0 |
| C12 |
C11 |
H11 |
119.6 |
120.1 |
| C14 |
C13 |
H13 |
120.1 |
120.0 |
| C13 |
C14 |
C15 |
119.6 |
120.1 |
| C13 |
C14 |
H14 |
120.2 |
119.9 |
| C15 |
C14 |
H14 |
120.2 |
120.0 |
| C14 |
C15 |
H15 |
119.7 |
120.1 |
| C17 |
C16 |
H16 |
119.8 |
120.0 |
| C18 |
C17 |
H17 |
119.9 |
119.9 |
| C19 |
C18 |
H18 |
120.0 |
119.9 |
| C18 |
C19 |
C20 |
120.0 |
120.2 |
| C18 |
C19 |
H19 |
120.0 |
119.9 |
| C20 |
C19 |
H19 |
120.0 |
119.9 |
| C19 |
C20 |
H20 |
119.8 |
120.1 |
| O22 |
S25 |
O23 |
109.9 |
123.1 |
Torsion Angles for 21Z
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N01 |
C06 |
N03 |
HN03 |
0.0 |
360.0 |
| N01 |
C06 |
N03 |
HN0A |
120.0 |
180.0 |
| N01 |
C06 |
C05 |
C08 |
179.2 |
180.0 |
| C07 |
N02 |
C09 |
HN02 |
180.0 |
180.0 |
| C09 |
N02 |
C07 |
HN02 |
180.0 |
180.0 |
| N01 |
C06 |
N03 |
C05 |
180.6 |
180.0 |
| HN03 |
N03 |
C06 |
HN0A |
240.0 |
180.0 |
| C06 |
N03 |
HN03 |
HN0A |
120.0 |
180.0 |
| C06 |
N03 |
HN0A |
HN03 |
240.0 |
180.0 |
| HN04 |
N04 |
S25 |
HN0B |
240.0 |
180.0 |
| S25 |
N04 |
HN04 |
HN0B |
120.0 |
180.0 |
| S25 |
N04 |
HN0B |
HN04 |
240.0 |
180.0 |
| C10 |
C08 |
C05 |
O21 |
180.7 |
180.0 |
| N01 |
C06 |
C05 |
N03 |
179.4 |
180.0 |
| C05 |
C06 |
N03 |
HN03 |
179.4 |
179.9 |
| C05 |
C06 |
N03 |
HN0A |
299.4 |
359.9 |
| C06 |
C05 |
C08 |
O21 |
12.7 |
6.6 |
| S24 |
C07 |
N02 |
HN02 |
169.9 |
353.5 |
| C05 |
C08 |
C10 |
O21 |
179.3 |
180.0 |
| C15 |
C09 |
N02 |
HN02 |
152.4 |
152.8 |
| C11 |
C09 |
N02 |
HN02 |
332.9 |
333.1 |
| C16 |
C10 |
C08 |
O21 |
233.7 |
26.8 |
| C20 |
C10 |
C08 |
O21 |
53.6 |
206.5 |
| C13 |
C12 |
C11 |
H11 |
180.1 |
180.0 |
| C12 |
S25 |
N04 |
HN04 |
180.0 |
240.0 |
| C12 |
S25 |
N04 |
HN0B |
300.0 |
60.0 |
| S25 |
C12 |
C11 |
H11 |
0.2 |
0.0 |
| C15 |
C14 |
C13 |
H14 |
180.0 |
179.7 |
| C13 |
C14 |
C15 |
H15 |
180.2 |
180.0 |
| H13 |
C13 |
C14 |
C15 |
180.2 |
179.8 |
| H13 |
C13 |
C14 |
H14 |
0.2 |
0.0 |
| C15 |
C14 |
C13 |
H13 |
180.2 |
179.8 |
| C13 |
C14 |
C15 |
H14 |
180.0 |
180.3 |
| H14 |
C14 |
C13 |
H13 |
0.2 |
0.0 |
| C13 |
C14 |
H14 |
C15 |
180.0 |
179.7 |
| H14 |
C14 |
C15 |
H15 |
0.2 |
359.8 |
| H15 |
C15 |
C14 |
H14 |
0.2 |
359.8 |
| C18 |
C17 |
C16 |
H16 |
179.9 |
180.1 |
| H17 |
C17 |
C16 |
H16 |
359.9 |
0.0 |
| C19 |
C18 |
C17 |
H17 |
179.9 |
180.0 |
| C20 |
C19 |
C18 |
H19 |
180.0 |
179.7 |
| C18 |
C19 |
C20 |
H20 |
179.9 |
180.0 |
| H18 |
C18 |
C17 |
H17 |
359.9 |
0.0 |
| H18 |
C18 |
C19 |
C20 |
180.2 |
179.7 |
| H18 |
C18 |
C19 |
H19 |
0.2 |
360.0 |
| C20 |
C19 |
C18 |
H18 |
180.2 |
179.7 |
| C18 |
C19 |
C20 |
H19 |
180.0 |
180.3 |
| H19 |
C19 |
C18 |
H18 |
0.2 |
360.0 |
| C18 |
C19 |
H19 |
C20 |
180.0 |
179.7 |
| H19 |
C19 |
C20 |
H20 |
359.9 |
359.8 |
| H20 |
C20 |
C19 |
H19 |
359.9 |
359.8 |
| O22 |
S25 |
N04 |
HN04 |
61.5 |
353.5 |
| O22 |
S25 |
N04 |
HN0B |
181.6 |
173.5 |
| O23 |
S25 |
N04 |
HN04 |
300.3 |
126.4 |
| O23 |
S25 |
N04 |
HN0B |
60.3 |
306.5 |