PDB Chemical Component 219
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 219
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.429 |
1.386 |
| C6 |
C1 |
1.432 |
1.381 |
| C1 |
H1 |
1.080 |
1.081 |
| C3 |
C2 |
1.443 |
1.378 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
C3 |
1.453 |
1.399 |
| C3 |
H3 |
1.080 |
1.080 |
| C7 |
C4 |
1.528 |
1.468 |
| C4 |
C5 |
1.459 |
1.405 |
| O8 |
C5 |
1.469 |
1.356 |
| C5 |
C6 |
1.453 |
1.387 |
| C6 |
H6 |
1.080 |
1.080 |
| O17 |
C7 |
1.341 |
1.212 |
| C7 |
H7 |
1.080 |
1.080 |
| P9 |
O8 |
1.614 |
1.610 |
| O19 |
P9 |
1.508 |
1.480 |
| O10 |
P9 |
1.518 |
1.610 |
| P9 |
O11 |
1.536 |
1.610 |
| C12 |
O10 |
1.391 |
1.429 |
| O11 |
HO11 |
0.949 |
0.966 |
| C21 |
C12 |
1.490 |
1.529 |
| C12 |
H12 |
1.100 |
1.090 |
| C12 |
H12A |
1.099 |
1.090 |
| C24 |
C21 |
1.545 |
1.530 |
| C21 |
C28 |
1.593 |
1.531 |
| C21 |
H21 |
1.100 |
1.090 |
| C24 |
C25 |
1.530 |
1.530 |
| C24 |
H24 |
1.100 |
1.090 |
| C24 |
H24A |
1.100 |
1.090 |
| C25 |
C26 |
1.519 |
1.530 |
| C25 |
H25 |
1.100 |
1.090 |
| C25 |
H25A |
1.100 |
1.090 |
| C26 |
C27 |
1.533 |
1.531 |
| C26 |
H26 |
1.100 |
1.090 |
| C26 |
H26A |
1.100 |
1.089 |
| C28 |
C27 |
1.537 |
1.529 |
| C27 |
H27 |
1.100 |
1.090 |
| C27 |
H27A |
1.100 |
1.091 |
| C28 |
H28 |
1.100 |
1.091 |
| C28 |
H28A |
1.100 |
1.090 |
Bond Angles for 219
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
H1 |
120.2 |
119.8 |
| C6 |
C1 |
H1 |
120.1 |
119.8 |
| C3 |
C2 |
H2 |
120.7 |
119.9 |
| C4 |
C3 |
H3 |
118.2 |
120.1 |
| C4 |
C5 |
C6 |
119.8 |
119.6 |
| C5 |
C6 |
H6 |
119.1 |
119.9 |
| O17 |
C7 |
H7 |
113.5 |
120.0 |
| O10 |
P9 |
O11 |
105.1 |
109.5 |
| P9 |
O11 |
HO11 |
109.5 |
114.0 |
| C21 |
C12 |
H12 |
111.4 |
109.5 |
| C21 |
C12 |
H12A |
111.4 |
109.5 |
| H12 |
C12 |
H12A |
109.5 |
109.4 |
| C24 |
C21 |
C28 |
107.5 |
109.4 |
| C24 |
C21 |
H21 |
110.1 |
109.5 |
| C28 |
C21 |
H21 |
109.5 |
109.5 |
| C21 |
C28 |
C27 |
116.8 |
109.5 |
| C21 |
C28 |
H28 |
107.6 |
109.4 |
| C21 |
C28 |
H28A |
107.6 |
109.5 |
| C25 |
C24 |
H24 |
108.1 |
109.4 |
| C25 |
C24 |
H24A |
108.0 |
109.4 |
| C24 |
C25 |
C26 |
110.2 |
109.5 |
| C24 |
C25 |
H25 |
109.3 |
109.5 |
| C24 |
C25 |
H25A |
109.3 |
109.5 |
| H24 |
C24 |
H24A |
109.5 |
109.5 |
| C26 |
C25 |
H25 |
109.3 |
109.5 |
| C26 |
C25 |
H25A |
109.3 |
109.4 |
| C25 |
C26 |
C27 |
109.2 |
109.4 |
| C25 |
C26 |
H26 |
109.5 |
109.4 |
| C25 |
C26 |
H26A |
109.6 |
109.5 |
| H25 |
C25 |
H25A |
109.5 |
109.5 |
| C27 |
C26 |
H26 |
109.5 |
109.4 |
| C27 |
C26 |
H26A |
109.5 |
109.5 |
| C26 |
C27 |
H27 |
107.5 |
109.4 |
| C26 |
C27 |
H27A |
107.6 |
109.4 |
| H26 |
C26 |
H26A |
109.5 |
109.5 |
| C28 |
C27 |
H27 |
107.6 |
109.5 |
| C28 |
C27 |
H27A |
107.6 |
109.5 |
| H27 |
C27 |
H27A |
109.4 |
109.5 |
| H28 |
C28 |
H28A |
109.5 |
109.5 |
Torsion Angles for 219
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C3 |
C2 |
C1 |
H1 |
179.2 |
180.0 |
| H2 |
C2 |
C1 |
H1 |
359.3 |
359.9 |
| C4 |
C3 |
C2 |
H2 |
178.5 |
180.0 |
| H3 |
C3 |
C2 |
H2 |
358.5 |
0.1 |
| C7 |
C4 |
C3 |
H3 |
7.1 |
359.9 |
| C5 |
C4 |
C3 |
H3 |
181.3 |
180.1 |
| C4 |
C5 |
C6 |
H6 |
176.8 |
180.1 |
| O8 |
C5 |
C6 |
H6 |
344.9 |
359.8 |
| C5 |
C6 |
C1 |
H1 |
183.1 |
179.8 |
| H6 |
C6 |
C1 |
H1 |
3.1 |
0.2 |
| O19 |
P9 |
O11 |
HO11 |
360.0 |
180.0 |
| O10 |
P9 |
O11 |
HO11 |
132.1 |
300.0 |
| H12 |
C12 |
C21 |
H12A |
122.6 |
119.9 |
| C21 |
C12 |
H12 |
H12A |
236.4 |
240.0 |
| C21 |
C12 |
H12A |
H12 |
123.6 |
120.0 |
| C24 |
C21 |
C12 |
H12 |
348.7 |
175.0 |
| C24 |
C21 |
C12 |
H12A |
226.2 |
55.0 |
| C28 |
C21 |
C24 |
H21 |
240.8 |
240.0 |
| C24 |
C21 |
C28 |
C27 |
321.5 |
60.0 |
| C24 |
C21 |
C28 |
H28 |
82.5 |
180.0 |
| C24 |
C21 |
C28 |
H28A |
200.4 |
300.0 |
| C28 |
C21 |
C12 |
H12 |
231.6 |
55.0 |
| C28 |
C21 |
C12 |
H12A |
109.1 |
295.1 |
| C24 |
C21 |
C28 |
H21 |
119.6 |
120.0 |
| C21 |
C28 |
C27 |
H27 |
278.6 |
180.0 |
| C21 |
C28 |
C27 |
H27A |
160.8 |
59.9 |
| H28 |
C28 |
C21 |
H28A |
242.1 |
240.0 |
| H21 |
C21 |
C12 |
H12 |
107.1 |
295.0 |
| H21 |
C21 |
C12 |
H12A |
344.6 |
175.0 |
| C24 |
C21 |
H21 |
C28 |
242.0 |
240.0 |
| H21 |
C21 |
C28 |
C27 |
201.8 |
300.1 |
| H21 |
C21 |
C28 |
H28 |
322.9 |
60.0 |
| H21 |
C21 |
C28 |
H28A |
80.8 |
180.0 |
| C25 |
C24 |
C21 |
C28 |
51.3 |
300.0 |
| C25 |
C24 |
C21 |
H21 |
170.6 |
60.0 |
| H24 |
C24 |
C25 |
H24A |
118.4 |
119.9 |
| C26 |
C25 |
C24 |
H25 |
239.9 |
240.0 |
| C26 |
C25 |
C24 |
H25A |
120.1 |
119.9 |
| C24 |
C25 |
C26 |
C27 |
57.9 |
300.1 |
| C24 |
C25 |
C26 |
H26 |
177.8 |
60.0 |
| C24 |
C25 |
C26 |
H26A |
298.0 |
180.1 |
| H25 |
C25 |
C24 |
H25A |
240.2 |
240.0 |
| H24 |
C24 |
C21 |
C28 |
172.2 |
60.0 |
| H24 |
C24 |
C21 |
H21 |
291.4 |
180.0 |
| C25 |
C24 |
H24 |
H24A |
242.6 |
240.1 |
| H24 |
C24 |
C25 |
C26 |
174.8 |
300.0 |
| H24 |
C24 |
C25 |
H25 |
294.9 |
60.0 |
| H24 |
C24 |
C25 |
H25A |
54.7 |
180.0 |
| H24A |
C24 |
C21 |
C28 |
290.5 |
180.0 |
| H24A |
C24 |
C21 |
H21 |
49.8 |
300.0 |
| C25 |
C24 |
H24A |
H24 |
117.5 |
119.9 |
| H24A |
C24 |
C25 |
C26 |
56.4 |
180.0 |
| H24A |
C24 |
C25 |
H25 |
176.5 |
300.1 |
| H24A |
C24 |
C25 |
H25A |
296.3 |
60.1 |
| C26 |
C25 |
C24 |
H24 |
174.8 |
300.0 |
| C26 |
C25 |
C24 |
H24A |
56.4 |
180.0 |
| C24 |
C25 |
C26 |
H25 |
120.1 |
120.0 |
| C24 |
C25 |
C26 |
H25A |
239.9 |
240.0 |
| H25 |
C25 |
C26 |
H25A |
119.8 |
120.0 |
| C27 |
C26 |
C25 |
H26 |
240.1 |
240.1 |
| C27 |
C26 |
C25 |
H26A |
119.9 |
120.0 |
| C25 |
C26 |
C27 |
H27 |
73.4 |
180.0 |
| C25 |
C26 |
C27 |
H27A |
191.2 |
299.9 |
| H26 |
C26 |
C25 |
H26A |
239.9 |
239.9 |
| H25 |
C25 |
C24 |
H24 |
294.9 |
60.0 |
| H25 |
C25 |
C24 |
H24A |
176.5 |
300.1 |
| C24 |
C25 |
H25 |
C26 |
239.3 |
240.0 |
| C24 |
C25 |
H25 |
H25A |
119.7 |
120.0 |
| C26 |
C25 |
H25 |
H25A |
240.4 |
240.1 |
| H25 |
C25 |
C26 |
C27 |
297.8 |
180.0 |
| H25 |
C25 |
C26 |
H26 |
57.7 |
299.9 |
| H25 |
C25 |
C26 |
H26A |
177.8 |
60.0 |
| H25A |
C25 |
C24 |
H24 |
54.7 |
180.0 |
| H25A |
C25 |
C24 |
H24A |
296.3 |
60.1 |
| C24 |
C25 |
H25A |
C26 |
120.7 |
120.0 |
| C24 |
C25 |
H25A |
H25 |
240.3 |
240.0 |
| C26 |
C25 |
H25A |
H25 |
119.6 |
120.0 |
| H25A |
C25 |
C26 |
C27 |
178.0 |
60.0 |
| H25A |
C25 |
C26 |
H26 |
297.9 |
180.0 |
| H25A |
C25 |
C26 |
H26A |
58.1 |
300.0 |
| C21 |
C28 |
C27 |
C26 |
39.7 |
300.0 |
| C27 |
C26 |
C25 |
H25 |
297.8 |
180.0 |
| C27 |
C26 |
C25 |
H25A |
178.0 |
60.0 |
| C25 |
C26 |
C27 |
H26 |
119.9 |
119.9 |
| C25 |
C26 |
C27 |
H26A |
240.0 |
240.0 |
| H26 |
C26 |
C27 |
H26A |
120.1 |
120.1 |
| C28 |
C27 |
C26 |
H27 |
238.9 |
240.0 |
| C28 |
C27 |
C26 |
H27A |
121.1 |
120.0 |
| H27 |
C27 |
C26 |
H27A |
242.2 |
240.1 |
| H26 |
C26 |
C25 |
H25 |
57.7 |
299.9 |
| H26 |
C26 |
C25 |
H25A |
297.9 |
180.0 |
| C25 |
C26 |
H26 |
C27 |
240.3 |
240.1 |
| C25 |
C26 |
H26 |
H26A |
120.2 |
120.0 |
| C27 |
C26 |
H26 |
H26A |
239.9 |
240.0 |
| H26 |
C26 |
C27 |
H27 |
313.5 |
60.1 |
| H26 |
C26 |
C27 |
H27A |
71.2 |
180.0 |
| H26A |
C26 |
C25 |
H25 |
177.8 |
60.0 |
| H26A |
C26 |
C25 |
H25A |
58.1 |
300.0 |
| C25 |
C26 |
H26A |
C27 |
119.7 |
120.0 |
| C25 |
C26 |
H26A |
H26 |
239.8 |
240.0 |
| C27 |
C26 |
H26A |
H26 |
120.1 |
120.0 |
| H26A |
C26 |
C27 |
H27 |
193.3 |
300.0 |
| H26A |
C26 |
C27 |
H27A |
311.1 |
59.9 |
| C27 |
C28 |
C21 |
H21 |
201.8 |
300.1 |
| C21 |
C28 |
C27 |
H28 |
121.1 |
119.9 |
| C21 |
C28 |
C27 |
H28A |
238.9 |
240.0 |
| C28 |
C27 |
C26 |
H26 |
192.4 |
300.0 |
| C28 |
C27 |
C26 |
H26A |
72.2 |
180.0 |
| C26 |
C27 |
C28 |
H27 |
121.1 |
120.0 |
| C26 |
C27 |
C28 |
H27A |
238.9 |
240.0 |
| H27 |
C27 |
C28 |
H27A |
117.8 |
120.0 |
| H27 |
C27 |
C26 |
H26 |
313.5 |
60.1 |
| H27 |
C27 |
C26 |
H26A |
193.3 |
300.0 |
| C26 |
C27 |
H27 |
H27A |
116.6 |
119.9 |
| C28 |
C27 |
H27 |
H27A |
243.4 |
239.9 |
| H27A |
C27 |
C26 |
H26 |
71.2 |
180.0 |
| H27A |
C27 |
C26 |
H26A |
311.1 |
59.9 |
| C26 |
C27 |
H27A |
H27 |
243.5 |
240.1 |
| C28 |
C27 |
H27A |
H27 |
116.6 |
120.1 |
| H28 |
C28 |
C21 |
H21 |
322.9 |
60.0 |
| C21 |
C28 |
H28 |
C27 |
233.3 |
240.0 |
| C21 |
C28 |
H28 |
H28A |
116.7 |
120.0 |
| H28 |
C28 |
C27 |
H27 |
157.5 |
60.1 |
| H28 |
C28 |
C27 |
H27A |
39.7 |
300.0 |
| H28A |
C28 |
C21 |
H21 |
80.8 |
180.0 |
| C21 |
C28 |
H28A |
C27 |
126.7 |
120.0 |
| C21 |
C28 |
H28A |
H28 |
243.3 |
240.0 |
| H28A |
C28 |
C27 |
H27 |
39.7 |
300.0 |
| H28A |
C28 |
C27 |
H27A |
281.9 |
180.0 |