PDB Chemical Component 20Z
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 20Z
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C06 |
N01 |
1.391 |
1.313 |
| N01 |
C07 |
1.314 |
1.301 |
| C07 |
N02 |
1.312 |
1.377 |
| N02 |
C08 |
1.303 |
1.398 |
| N02 |
HN02 |
1.000 |
0.970 |
| N03 |
C06 |
1.272 |
1.385 |
| N03 |
HN03 |
1.000 |
0.969 |
| N03 |
HN0A |
1.000 |
0.970 |
| S29 |
N04 |
1.686 |
1.656 |
| N04 |
HN04 |
1.000 |
0.970 |
| N04 |
HN0B |
1.000 |
0.970 |
| C06 |
C05 |
1.402 |
1.384 |
| C09 |
C05 |
1.411 |
1.407 |
| C05 |
S28 |
1.729 |
1.761 |
| C07 |
S28 |
1.736 |
1.709 |
| C08 |
C16 |
1.428 |
1.389 |
| C08 |
C20 |
1.444 |
1.390 |
| O25 |
C09 |
1.223 |
1.219 |
| C09 |
C10 |
1.392 |
1.480 |
| C10 |
C11 |
1.433 |
1.405 |
| C10 |
C15 |
1.438 |
1.385 |
| C11 |
C12 |
1.423 |
1.358 |
| C11 |
H11 |
1.080 |
1.080 |
| C12 |
C13 |
1.431 |
1.406 |
| C12 |
H12 |
1.080 |
1.079 |
| C14 |
C13 |
1.456 |
1.418 |
| C13 |
C21 |
1.433 |
1.405 |
| C15 |
C14 |
1.433 |
1.403 |
| C14 |
C24 |
1.431 |
1.407 |
| C15 |
H15 |
1.080 |
1.079 |
| C16 |
C17 |
1.411 |
1.381 |
| C16 |
H16 |
1.080 |
1.080 |
| C17 |
C18 |
1.421 |
1.383 |
| C17 |
H17 |
1.080 |
1.080 |
| C19 |
C18 |
1.424 |
1.384 |
| C18 |
S29 |
1.784 |
1.761 |
| C20 |
C19 |
1.417 |
1.381 |
| C19 |
H19 |
1.081 |
1.080 |
| C20 |
H20 |
1.080 |
1.080 |
| C21 |
C22 |
1.426 |
1.362 |
| C21 |
H21 |
1.080 |
1.080 |
| C23 |
C22 |
1.421 |
1.393 |
| C22 |
H22 |
1.080 |
1.080 |
| C24 |
C23 |
1.425 |
1.361 |
| C23 |
H23 |
1.080 |
1.081 |
| C24 |
H24 |
1.080 |
1.080 |
| O26 |
S29 |
1.448 |
1.421 |
| S29 |
O27 |
1.456 |
1.421 |
Bond Angles for 20Z
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C06 |
N01 |
C07 |
110.3 |
117.4 |
| N01 |
C07 |
N02 |
119.6 |
124.6 |
| N01 |
C07 |
S28 |
114.9 |
110.8 |
| C07 |
N02 |
C08 |
130.4 |
120.0 |
| C07 |
N02 |
HN02 |
114.8 |
120.0 |
| C08 |
N02 |
HN02 |
114.8 |
120.0 |
| N02 |
C08 |
C16 |
116.8 |
120.1 |
| N02 |
C08 |
C20 |
124.5 |
120.1 |
| C06 |
N03 |
HN03 |
109.5 |
120.0 |
| C06 |
N03 |
HN0A |
109.5 |
120.0 |
| N03 |
C06 |
C05 |
122.9 |
123.2 |
| HN03 |
N03 |
HN0A |
109.5 |
120.0 |
| S29 |
N04 |
HN04 |
109.5 |
120.0 |
| S29 |
N04 |
HN0B |
109.5 |
120.0 |
| HN04 |
N04 |
HN0B |
109.5 |
120.0 |
| C06 |
C05 |
S28 |
108.1 |
107.7 |
| C09 |
C05 |
S28 |
125.5 |
126.2 |
| C05 |
S28 |
C07 |
90.6 |
90.5 |
| C16 |
C08 |
C20 |
118.6 |
119.9 |
| C08 |
C16 |
C17 |
120.8 |
119.9 |
| C08 |
C16 |
H16 |
119.6 |
120.0 |
| C08 |
C20 |
C19 |
120.4 |
119.9 |
| C08 |
C20 |
H20 |
119.8 |
120.0 |
| C09 |
C10 |
C11 |
119.6 |
119.8 |
| C09 |
C10 |
C15 |
121.5 |
119.7 |
| C11 |
C10 |
C15 |
118.9 |
120.5 |
| C10 |
C11 |
C12 |
120.6 |
120.9 |
| C10 |
C11 |
H11 |
119.7 |
119.6 |
| C10 |
C15 |
C14 |
121.2 |
119.4 |
| C10 |
C15 |
H15 |
119.4 |
120.3 |
| C12 |
C11 |
H11 |
119.7 |
119.5 |
| C11 |
C12 |
C13 |
121.0 |
120.0 |
| C11 |
C12 |
H12 |
119.5 |
120.0 |
| C13 |
C12 |
H12 |
119.5 |
120.0 |
| C12 |
C13 |
C21 |
121.7 |
121.0 |
| C14 |
C13 |
C21 |
119.1 |
119.3 |
| C13 |
C21 |
C22 |
120.7 |
119.7 |
| C13 |
C21 |
H21 |
119.7 |
120.2 |
| C15 |
C14 |
C24 |
121.6 |
121.1 |
| C14 |
C24 |
C23 |
120.8 |
119.6 |
| C14 |
C24 |
H24 |
119.6 |
120.2 |
| C17 |
C16 |
H16 |
119.6 |
120.1 |
| C16 |
C17 |
C18 |
120.2 |
120.1 |
| C16 |
C17 |
H17 |
119.9 |
120.0 |
| C18 |
C17 |
H17 |
119.9 |
119.9 |
| C17 |
C18 |
S29 |
119.6 |
120.0 |
| C19 |
C18 |
S29 |
120.2 |
119.9 |
| C18 |
S29 |
O26 |
107.7 |
106.4 |
| C18 |
S29 |
O27 |
110.2 |
106.4 |
| C20 |
C19 |
H19 |
120.1 |
120.0 |
| C22 |
C21 |
H21 |
119.6 |
120.1 |
| C21 |
C22 |
H22 |
120.0 |
119.5 |
| C23 |
C22 |
H22 |
119.9 |
119.5 |
| C24 |
C23 |
H23 |
119.9 |
119.5 |
| O26 |
S29 |
O27 |
109.9 |
123.1 |
Torsion Angles for 20Z
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C06 |
N01 |
C07 |
N02 |
179.3 |
180.1 |
| C06 |
N01 |
C07 |
S28 |
0.0 |
0.0 |
| N01 |
C07 |
N02 |
C08 |
151.9 |
357.1 |
| N01 |
C07 |
N02 |
HN02 |
331.9 |
177.2 |
| C05 |
S28 |
C07 |
N01 |
360.0 |
0.0 |
| N01 |
C07 |
N02 |
S28 |
180.8 |
179.9 |
| C08 |
N02 |
C07 |
HN02 |
180.0 |
179.9 |
| C07 |
N02 |
C08 |
C16 |
185.7 |
149.1 |
| C07 |
N02 |
C08 |
C20 |
5.8 |
328.9 |
| C07 |
N02 |
C08 |
HN02 |
180.0 |
180.1 |
| C16 |
C08 |
N02 |
C20 |
179.9 |
180.2 |
| N02 |
C08 |
C16 |
C17 |
179.8 |
180.0 |
| N02 |
C08 |
C16 |
H16 |
359.8 |
0.1 |
| N02 |
C08 |
C20 |
C19 |
180.2 |
179.7 |
| N02 |
C08 |
C20 |
H20 |
0.2 |
360.0 |
| C07 |
N02 |
HN02 |
C08 |
180.0 |
179.9 |
| HN02 |
N02 |
C08 |
C16 |
5.7 |
329.0 |
| HN02 |
N02 |
C08 |
C20 |
185.8 |
148.8 |
| N03 |
C06 |
N01 |
C07 |
180.0 |
180.0 |
| HN03 |
N03 |
C06 |
HN0A |
240.0 |
180.0 |
| N03 |
C06 |
C05 |
S28 |
180.0 |
180.0 |
| C06 |
N03 |
HN03 |
HN0A |
120.0 |
180.0 |
| HN03 |
N03 |
C06 |
C05 |
179.9 |
180.0 |
| C06 |
N03 |
HN0A |
HN03 |
240.0 |
180.0 |
| HN0A |
N03 |
C06 |
C05 |
299.9 |
360.0 |
| HN04 |
N04 |
S29 |
HN0B |
240.0 |
180.0 |
| S29 |
N04 |
HN04 |
HN0B |
120.0 |
180.0 |
| S29 |
N04 |
HN0B |
HN04 |
240.0 |
180.0 |
| C05 |
C06 |
N01 |
C07 |
0.0 |
360.0 |
| C05 |
C06 |
N03 |
HN03 |
179.9 |
180.0 |
| C05 |
C06 |
N03 |
HN0A |
299.9 |
360.0 |
| C09 |
C05 |
C06 |
S28 |
180.1 |
180.0 |
| C06 |
C05 |
S28 |
C07 |
0.1 |
360.0 |
| C06 |
C05 |
C09 |
S28 |
179.8 |
180.0 |
| C09 |
C05 |
S28 |
C07 |
179.9 |
180.0 |
| N01 |
C07 |
S28 |
C05 |
360.0 |
0.0 |
| N01 |
C07 |
S28 |
N02 |
179.2 |
180.1 |
| S28 |
C07 |
N02 |
C08 |
331.1 |
177.2 |
| S28 |
C07 |
N02 |
HN02 |
151.1 |
357.3 |
| C16 |
C08 |
N02 |
HN02 |
5.7 |
329.0 |
| N02 |
C08 |
C16 |
C20 |
180.1 |
179.8 |
| C16 |
C08 |
C20 |
C19 |
0.3 |
359.5 |
| C16 |
C08 |
C20 |
H20 |
180.3 |
179.8 |
| C17 |
C16 |
C08 |
H16 |
180.0 |
179.9 |
| C08 |
C16 |
C17 |
C18 |
0.1 |
0.1 |
| C08 |
C16 |
C17 |
H17 |
180.1 |
180.0 |
| C20 |
C08 |
N02 |
HN02 |
185.8 |
148.8 |
| N02 |
C08 |
C20 |
C16 |
179.9 |
180.2 |
| C20 |
C08 |
C16 |
C17 |
359.7 |
0.2 |
| C20 |
C08 |
C16 |
H16 |
179.7 |
180.3 |
| C08 |
C20 |
C19 |
H19 |
179.9 |
180.3 |
| O25 |
C09 |
C05 |
S28 |
181.3 |
172.3 |
| C10 |
C09 |
C05 |
S28 |
359.5 |
352.4 |
| C11 |
C10 |
C09 |
C15 |
180.3 |
180.3 |
| C09 |
C10 |
C11 |
C12 |
179.4 |
180.0 |
| C09 |
C10 |
C11 |
H11 |
359.4 |
360.0 |
| C09 |
C10 |
C15 |
C14 |
180.8 |
179.7 |
| C09 |
C10 |
C15 |
H15 |
0.7 |
0.1 |
| C09 |
C10 |
C11 |
C15 |
179.7 |
179.7 |
| C11 |
C10 |
C15 |
C14 |
0.4 |
359.4 |
| C11 |
C10 |
C15 |
H15 |
180.4 |
179.7 |
| C12 |
C11 |
C10 |
H11 |
180.0 |
180.1 |
| C10 |
C11 |
C12 |
C13 |
359.9 |
359.9 |
| C10 |
C11 |
C12 |
H12 |
179.9 |
180.0 |
| C09 |
C10 |
C15 |
C11 |
180.3 |
180.3 |
| C15 |
C10 |
C11 |
C12 |
359.7 |
0.3 |
| C15 |
C10 |
C11 |
H11 |
179.8 |
180.3 |
| C10 |
C15 |
C14 |
C24 |
179.6 |
180.4 |
| C12 |
C11 |
C10 |
C15 |
359.7 |
0.3 |
| C10 |
C11 |
C12 |
H11 |
180.0 |
179.9 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
C21 |
180.4 |
179.9 |
| H11 |
C11 |
C10 |
C15 |
179.8 |
180.3 |
| C10 |
C11 |
H11 |
C12 |
180.0 |
180.1 |
| H11 |
C11 |
C12 |
C13 |
179.9 |
180.0 |
| H11 |
C11 |
C12 |
H12 |
359.9 |
0.0 |
| C13 |
C12 |
C11 |
H11 |
179.9 |
180.0 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
| C14 |
C13 |
C12 |
C21 |
179.9 |
180.1 |
| C12 |
C13 |
C21 |
C22 |
179.9 |
180.0 |
| C12 |
C13 |
C21 |
H21 |
359.9 |
0.1 |
| H12 |
C12 |
C11 |
H11 |
359.9 |
0.0 |
| C11 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
| H12 |
C12 |
C13 |
C21 |
0.4 |
359.9 |
| C10 |
C15 |
C14 |
C13 |
359.7 |
0.6 |
| C14 |
C13 |
C12 |
H12 |
180.3 |
180.0 |
| C12 |
C13 |
C14 |
C21 |
180.1 |
179.9 |
| C14 |
C13 |
C21 |
C22 |
0.0 |
359.9 |
| C14 |
C13 |
C21 |
H21 |
180.0 |
180.0 |
| C21 |
C13 |
C12 |
H12 |
0.4 |
359.9 |
| C22 |
C21 |
C13 |
H21 |
180.0 |
179.9 |
| C13 |
C21 |
C22 |
H22 |
180.1 |
180.0 |
| C10 |
C15 |
C14 |
H15 |
180.0 |
180.4 |
| C15 |
C14 |
C13 |
C21 |
179.8 |
179.8 |
| C15 |
C14 |
C24 |
C23 |
180.2 |
180.3 |
| C15 |
C14 |
C24 |
H24 |
0.2 |
0.1 |
| C24 |
C14 |
C13 |
C21 |
359.9 |
0.0 |
| C14 |
C24 |
C23 |
H23 |
180.0 |
180.0 |
| C10 |
C15 |
H15 |
C14 |
180.0 |
179.6 |
| H15 |
C15 |
C14 |
C24 |
359.6 |
360.0 |
| C17 |
C16 |
C08 |
C20 |
359.7 |
0.2 |
| C08 |
C16 |
C17 |
H16 |
180.0 |
180.1 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
180.1 |
| C16 |
C17 |
C18 |
S29 |
180.8 |
180.0 |
| H16 |
C16 |
C08 |
C20 |
179.7 |
180.3 |
| C08 |
C16 |
H16 |
C17 |
180.0 |
179.9 |
| H16 |
C16 |
C17 |
C18 |
180.1 |
180.0 |
| H16 |
C16 |
C17 |
H17 |
0.1 |
359.9 |
| C18 |
C17 |
C16 |
H16 |
180.1 |
180.0 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
179.9 |
| C19 |
C18 |
C17 |
S29 |
179.3 |
180.0 |
| C17 |
C18 |
S29 |
O26 |
88.0 |
336.4 |
| C17 |
C18 |
S29 |
O27 |
328.0 |
203.5 |
| H17 |
C17 |
C16 |
H16 |
0.1 |
359.9 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
180.1 |
| H17 |
C17 |
C18 |
S29 |
0.8 |
0.1 |
| C08 |
C20 |
C19 |
C18 |
359.9 |
0.6 |
| C19 |
C18 |
C17 |
H17 |
180.1 |
180.0 |
| C17 |
C18 |
C19 |
S29 |
180.7 |
180.0 |
| C19 |
C18 |
S29 |
O26 |
268.7 |
156.5 |
| C19 |
C18 |
S29 |
O27 |
148.7 |
23.6 |
| C18 |
S29 |
N04 |
HN04 |
180.0 |
0.1 |
| C18 |
S29 |
N04 |
HN0B |
300.0 |
180.0 |
| S29 |
C18 |
C17 |
H17 |
0.8 |
0.1 |
| O26 |
S29 |
C18 |
O27 |
120.0 |
132.9 |
| C08 |
C20 |
C19 |
H20 |
180.0 |
180.3 |
| C20 |
C19 |
C18 |
S29 |
179.2 |
179.7 |
| H19 |
C19 |
C18 |
S29 |
359.2 |
360.0 |
| C08 |
C20 |
H20 |
C19 |
180.0 |
179.7 |
| H20 |
C20 |
C19 |
H19 |
359.9 |
360.0 |
| C13 |
C21 |
C22 |
H21 |
180.0 |
180.1 |
| C23 |
C22 |
C21 |
H22 |
180.0 |
180.1 |
| C13 |
C21 |
H21 |
C22 |
180.0 |
179.9 |
| H21 |
C21 |
C22 |
H22 |
0.1 |
359.9 |
| C14 |
C24 |
C23 |
C22 |
0.0 |
360.0 |
| C23 |
C22 |
C21 |
H21 |
180.1 |
180.0 |
| C21 |
C22 |
C23 |
H22 |
180.0 |
179.9 |
| H22 |
C22 |
C21 |
H21 |
0.1 |
359.9 |
| C14 |
C24 |
C23 |
H24 |
180.0 |
179.9 |
| C24 |
C23 |
C22 |
H22 |
179.9 |
180.1 |
| H23 |
C23 |
C22 |
H22 |
359.9 |
0.1 |
| C14 |
C24 |
H24 |
C23 |
180.0 |
180.1 |
| H24 |
C24 |
C23 |
H23 |
360.0 |
0.1 |
| O26 |
S29 |
N04 |
HN04 |
297.8 |
113.6 |
| O26 |
S29 |
N04 |
HN0B |
57.8 |
293.6 |
| C18 |
S29 |
O26 |
O27 |
239.8 |
237.1 |
| O27 |
S29 |
N04 |
HN04 |
58.3 |
246.5 |
| O27 |
S29 |
N04 |
HN0B |
178.2 |
66.5 |
| C18 |
S29 |
O27 |
O26 |
118.6 |
122.9 |