PDB Chemical Component 1X4

Ideal Model

Chemical Description

Name 2,3-dideoxy-5-O-phosphono-alpha-D-ribofuranose
Synonyms 2,3-dideoxyribose-5-phosphate; 2,3-dideoxy-5-O-phosphono-alpha-D-ribose; 2,3-dideoxy-5-O-phosphono-D-ribose; 2,3-dideoxy-5-O-phosphono-ribose
Formula C5 H11 O6 P
Formal charge 0
Molecular weight 198.111 g/mol
Component type D-saccharide, alpha linking

Chemical features

Atom count 23
Chiral atom count 2
Chiral atoms C4 C1
Observed leaving atoms O1 HO1
Bond count 23
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) [(2S,5S)-5-hydroxytetrahydrofuran-2-yl]methyl dihydrogen phosphate
Systematic name (OpenEye OEToolkits) [(2S,5S)-5-oxidanyloxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@@H]1CC[C@@H](CO[P](O)(O)=O)O1
SMILES (CACTVS) O[CH]1CC[CH](CO[P](O)(O)=O)O1
Stereo SMILES (OpenEye) C1C[C@H](O[C@@H]1COP(=O)(O)O)O
InChI descriptor InChI=1S/C5H11O6P/c6-5-2-1-4(11-5)3-10-12(7,8)9/h4-6H,1-3H2,(H2,7,8,9)/t4-,5-/m0/s1
InChIKey descriptor DOJAXCJBQVATEM-WHFBIAKZSA-N

Status Information

Last modified 2020-07-17
Created 2013-07-22
Release status REL
Model PDB code 4LR9
Processing site RCSB