PDB Chemical Component 1X4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1X4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.531 1.554
C2 C1 1.523 1.550
C3 C4 1.524 1.543
C1 O1 1.421 1.429
C1 O4 1.422 1.436
C4 O4 1.438 1.433
C4 C5 1.514 1.529
O2P P 1.615 1.481
O5 C5 1.427 1.429
O5 P 1.612 1.611
P O1P 1.608 1.610
P O3P 1.478 1.609
O1P H1A 0.950 0.967
O3P H2A 0.950 0.967
C5 H51 1.100 1.090
C5 H52 1.100 1.090
C4 H4 1.100 1.090
C3 H3 1.100 1.090
C3 H7 1.100 1.090
C2 H2 1.100 1.090
C2 H9 1.100 1.090
C1 H1 1.100 1.090
O1 HO1 0.950 0.966

Bond Angles for 1X4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C3 H3 110.9 110.8
C2 C3 H7 111.0 111.0
C2 C1 O1 108.9 110.3
C1 C2 H2 111.0 111.1
C1 C2 H9 110.9 111.1
C2 C1 H1 111.3 110.3
C3 C4 H4 111.6 109.9
O1 C1 H1 112.9 110.2
C1 O1 HO1 109.5 114.0
O4 C4 H4 112.9 109.8
C4 C5 H51 109.0 109.5
C4 C5 H52 109.0 109.5
O2P P O3P 112.8 109.5
O5 C5 H51 109.1 109.5
O5 C5 H52 109.0 109.4
P O1P H1A 109.5 114.0
P O3P H2A 109.5 114.0
H51 C5 H52 109.5 109.5
H3 C3 H7 109.5 110.8
H2 C2 H9 109.5 111.0

Torsion Angles for 1X4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C3 C4 H4 98.8 98.1
H3 C3 C2 H7 238.0 123.5
C1 C2 C3 H3 114.8 275.9
C1 C2 C3 H7 236.8 152.4
O1 C1 C2 H1 125.1 122.1
C2 C1 O1 HO1 180.0 180.0
H2 C2 C1 H9 122.0 124.2
O4 C4 C3 H4 237.8 240.5
C3 C4 C5 H51 49.2 64.6
C3 C4 C5 H52 168.7 304.5
O1 C1 C2 H2 158.3 86.7
O1 C1 C2 H9 36.4 322.6
C2 C1 O1 H1 235.9 237.9
C1 O4 C4 H4 282.9 238.7
C3 C4 O4 H4 121.3 119.6
O4 C4 C5 H51 297.1 306.5
O4 C4 C5 H52 56.6 186.4
O5 C5 C4 H51 239.7 120.0
O5 C5 C4 H52 120.3 240.1
H51 C5 C4 H52 240.5 120.0
O2P P O1P H1A 0.0 300.0
O2P P O3P H2A 360.0 180.1
C4 C5 O5 H51 120.2 240.0
C4 C5 O5 H52 239.8 120.0
H51 C5 O5 H52 119.5 240.0
O5 P O1P H1A 247.0 180.0
O5 P O3P H2A 120.5 300.1
O3P P O1P H1A 122.6 60.0
C4 C5 H51 H52 119.2 240.0
O5 C5 H51 H52 240.8 120.0
C4 C5 H52 H51 240.8 120.0
O5 C5 H52 H51 119.3 240.0
H4 C4 C5 H51 172.2 185.6
H4 C4 C5 H52 291.7 65.6
C2 C3 H3 H7 122.8 236.4
H3 C3 C4 H4 339.7 216.3
C2 C3 H7 H3 237.2 123.6
H7 C3 C4 H4 217.8 339.8
H2 C2 C3 H3 233.8 33.8
H2 C2 C3 H7 355.8 270.3
H2 C2 C1 O1 158.3 86.7
C1 C2 H2 H9 237.2 235.8
H2 C2 C1 H1 33.3 324.7
H9 C2 C3 H3 355.8 158.0
H9 C2 C3 H7 117.8 34.5
H9 C2 C1 O1 36.4 322.6
C1 C2 H9 H2 122.8 124.2
H9 C2 C1 H1 271.3 200.5
C2 C1 H1 O1 122.8 122.1
H1 C1 C2 H2 33.3 324.7
H1 C1 C2 H9 271.3 200.5
H1 C1 O1 HO1 304.1 302.1
HO1 O1 C1 H1 304.1 302.1