Atom Nomenclature for 1UN

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 1UN

Atom Name (V3) Atom Name (V2)
C1 C1
C2 C2
C3 C3
C4 C4
C5 C5
C6 C6
N7 N7
C8 C8
C9 C9
C10 C10
C11 C11
N12 N12
C13 C13
C14 C14
C15 C15
C16 C16
O17 O17
C18 C18
C19 C19
C20 C20
O21 O21
N22 N22
C23 C23
C24 C24
O25 O25
C29 C29
C30 C30
C31 C31
C32 C32
C33 C33
C34 C34
O38 O38
C39 C39
S74 S74
C77 C77
C78 C78
C79 C79
C80 C80
C81 C81
C82 C82
H1 H1
H2 H2
H31A 1H3
H32A 2H3
H41 1H4
H42 2H4
H51 1H5
H52 2H5
H61 1H6
H62 2H6
H8 H8
H91 1H9
H92 2H9
H101 1H10
H102 2H10
HNC HNC
H141 1H14
H142 2H14
H143 3H14
H151 1H15
H152 2H15
H153 3H15
H161 1H16
H162 2H16
H163 3H16
H181 1H18
H182 2H18
H19 H19
H20 H20
HOL HOL
HNM HNM
H231 1H23
H232 2H23
H30 H30
H31 H31
H32 H32
HO HO
H391 1H39
H392 2H39
H393 3H39
H78 H78
H79 H79
H80 H80
H81 H81
H82 H82