PDB Chemical Component 1U4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1U4
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C63 |
C1 |
1.395 |
1.381 |
| C1 |
C2 |
1.402 |
1.382 |
| C1 |
H1 |
1.080 |
1.080 |
| C61 |
C63 |
1.399 |
1.382 |
| C63 |
H63 |
1.081 |
1.080 |
| C61 |
C6 |
1.399 |
1.382 |
| C61 |
H61 |
1.080 |
1.080 |
| C7 |
C6 |
1.537 |
1.508 |
| C6 |
C4 |
1.400 |
1.382 |
| O8 |
C7 |
1.448 |
1.452 |
| C7 |
H7 |
1.100 |
1.090 |
| C7 |
H7A |
1.100 |
1.090 |
| C9 |
O8 |
1.329 |
1.347 |
| N11 |
C9 |
1.341 |
1.348 |
| O10 |
C9 |
1.233 |
1.215 |
| C12 |
N11 |
1.434 |
1.465 |
| N11 |
HN11 |
1.000 |
0.970 |
| P13 |
C12 |
1.821 |
1.823 |
| C12 |
H12 |
1.100 |
1.090 |
| C12 |
H12A |
1.099 |
1.090 |
| N14 |
P13 |
1.655 |
1.683 |
| P13 |
O54 |
1.493 |
1.480 |
| P13 |
O55 |
1.494 |
1.610 |
| O55 |
HO55 |
0.950 |
0.967 |
| C15 |
N14 |
1.468 |
1.469 |
| N14 |
HN14 |
1.000 |
1.008 |
| C38 |
C15 |
1.567 |
1.530 |
| C15 |
C16 |
1.512 |
1.508 |
| C15 |
H15 |
1.100 |
1.090 |
| C41 |
C38 |
1.534 |
1.507 |
| C38 |
H38 |
1.100 |
1.089 |
| C38 |
H38A |
1.100 |
1.090 |
| C42 |
C41 |
1.402 |
1.382 |
| C41 |
C50 |
1.392 |
1.382 |
| C48 |
C50 |
1.388 |
1.382 |
| C50 |
H50 |
1.080 |
1.081 |
| C46 |
C48 |
1.388 |
1.383 |
| C48 |
H48 |
1.080 |
1.079 |
| C44 |
C46 |
1.401 |
1.382 |
| C46 |
H46 |
1.080 |
1.080 |
| C44 |
C42 |
1.401 |
1.383 |
| C44 |
H44 |
1.080 |
1.080 |
| C42 |
H42 |
1.080 |
1.080 |
| O17 |
C16 |
1.234 |
1.213 |
| C16 |
N18 |
1.342 |
1.347 |
| N18 |
C19 |
1.456 |
1.464 |
| N18 |
HN18 |
1.000 |
0.971 |
| C20 |
C19 |
1.558 |
1.530 |
| C19 |
C33 |
1.505 |
1.507 |
| C19 |
H19 |
1.100 |
1.090 |
| C33 |
O34 |
1.265 |
1.209 |
| C33 |
O35 |
1.268 |
1.342 |
| O35 |
HO35 |
0.950 |
0.967 |
| C21 |
C20 |
1.541 |
1.530 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.090 |
| C26 |
C21 |
1.567 |
1.530 |
| C22 |
C21 |
1.565 |
1.529 |
| C21 |
H21 |
1.100 |
1.090 |
| C26 |
H26 |
1.100 |
1.090 |
| C26 |
H26A |
1.100 |
1.089 |
| C26 |
H26B |
1.100 |
1.090 |
| C22 |
H22 |
1.100 |
1.090 |
| C22 |
H22A |
1.099 |
1.091 |
| C22 |
H22B |
1.100 |
1.090 |
| C4 |
C2 |
1.398 |
1.383 |
| C4 |
H4 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
Bond Angles for 1U4
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C63 |
C1 |
H1 |
119.9 |
120.0 |
| C1 |
C2 |
H2 |
120.2 |
120.1 |
| C61 |
C63 |
H63 |
120.0 |
119.9 |
| C7 |
C6 |
C4 |
120.6 |
120.0 |
| O8 |
C7 |
C6 |
108.5 |
109.4 |
| C6 |
C7 |
H7 |
109.8 |
109.4 |
| C6 |
C7 |
H7A |
109.8 |
109.5 |
| C6 |
C4 |
C2 |
120.4 |
120.0 |
| C6 |
C4 |
H4 |
119.8 |
120.1 |
| O8 |
C7 |
H7 |
109.8 |
109.5 |
| O8 |
C7 |
H7A |
109.8 |
109.5 |
| C9 |
O8 |
C7 |
116.0 |
117.0 |
| H7 |
C7 |
H7A |
109.1 |
109.5 |
| O10 |
C9 |
O8 |
126.5 |
120.0 |
| C12 |
N11 |
HN11 |
120.7 |
120.0 |
| P13 |
C12 |
H12 |
108.9 |
109.5 |
| P13 |
C12 |
H12A |
108.9 |
109.5 |
| H12 |
C12 |
H12A |
110.0 |
109.5 |
| O54 |
P13 |
O55 |
112.6 |
109.4 |
| P13 |
O55 |
HO55 |
109.5 |
114.0 |
| C15 |
N14 |
HN14 |
106.1 |
111.0 |
| C38 |
C15 |
H15 |
112.7 |
109.5 |
| C16 |
C15 |
H15 |
108.6 |
109.5 |
| C15 |
C16 |
N18 |
119.4 |
120.0 |
| C41 |
C38 |
H38 |
108.6 |
109.5 |
| C41 |
C38 |
H38A |
108.7 |
109.4 |
| H38 |
C38 |
H38A |
110.3 |
109.5 |
| C42 |
C41 |
C50 |
121.3 |
120.0 |
| C41 |
C50 |
H50 |
120.3 |
120.0 |
| C48 |
C50 |
H50 |
120.2 |
120.0 |
| C46 |
C48 |
H48 |
120.0 |
120.0 |
| C44 |
C46 |
C48 |
120.6 |
120.0 |
| C44 |
C46 |
H46 |
119.7 |
120.0 |
| C46 |
C44 |
H44 |
120.2 |
120.0 |
| C44 |
C42 |
H42 |
120.6 |
119.9 |
| O17 |
C16 |
N18 |
119.7 |
120.0 |
| C16 |
N18 |
C19 |
123.1 |
120.0 |
| C16 |
N18 |
HN18 |
118.5 |
120.0 |
| C19 |
N18 |
HN18 |
118.4 |
120.0 |
| N18 |
C19 |
C33 |
112.0 |
109.5 |
| N18 |
C19 |
H19 |
111.9 |
109.5 |
| C20 |
C19 |
H19 |
108.4 |
109.4 |
| C33 |
C19 |
H19 |
102.7 |
109.5 |
| C19 |
C33 |
O34 |
118.5 |
119.9 |
| C19 |
C33 |
O35 |
120.7 |
120.0 |
| O34 |
C33 |
O35 |
120.9 |
120.0 |
| C33 |
O35 |
HO35 |
109.5 |
117.0 |
| C21 |
C20 |
H20 |
107.4 |
109.5 |
| C21 |
C20 |
H20A |
107.3 |
109.5 |
| H20 |
C20 |
H20A |
111.5 |
109.5 |
| C26 |
C21 |
H21 |
109.0 |
109.4 |
| C22 |
C21 |
H21 |
110.2 |
109.5 |
| H26 |
C26 |
H26A |
109.5 |
109.4 |
| H26 |
C26 |
H26B |
109.5 |
109.4 |
| H26A |
C26 |
H26B |
109.5 |
109.5 |
| H22 |
C22 |
H22A |
109.5 |
109.5 |
| H22 |
C22 |
H22B |
109.4 |
109.5 |
| H22A |
C22 |
H22B |
109.5 |
109.4 |
| C2 |
C4 |
H4 |
119.8 |
120.0 |
| C4 |
C2 |
H2 |
120.3 |
120.0 |
Torsion Angles for 1U4
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C63 |
C1 |
C2 |
H2 |
177.7 |
179.7 |
| C1 |
C2 |
C4 |
H4 |
180.2 |
180.0 |
| C4 |
C2 |
C1 |
H2 |
180.0 |
180.4 |
| H1 |
C1 |
C2 |
H2 |
357.7 |
359.9 |
| C61 |
C63 |
C1 |
H1 |
183.9 |
179.8 |
| H63 |
C63 |
C1 |
H1 |
3.9 |
359.7 |
| C61 |
C6 |
C7 |
H7 |
26.7 |
210.0 |
| C61 |
C6 |
C7 |
H7A |
146.7 |
330.0 |
| C61 |
C6 |
C4 |
H4 |
180.3 |
180.0 |
| H61 |
C61 |
C63 |
H63 |
356.6 |
360.0 |
| C7 |
C6 |
C4 |
C2 |
175.5 |
180.1 |
| C7 |
C6 |
C4 |
H4 |
355.5 |
359.9 |
| O8 |
C7 |
C6 |
H7 |
240.0 |
240.0 |
| O8 |
C7 |
C6 |
H7A |
120.0 |
120.0 |
| C9 |
O8 |
C7 |
C6 |
99.0 |
180.0 |
| H7 |
C7 |
C6 |
H7A |
240.0 |
240.0 |
| O8 |
C7 |
C6 |
C4 |
91.5 |
270.1 |
| C4 |
C6 |
C7 |
H7 |
211.5 |
30.1 |
| C4 |
C6 |
C7 |
H7A |
331.4 |
150.1 |
| C2 |
C4 |
C6 |
H4 |
180.0 |
180.1 |
| C6 |
C4 |
C2 |
H2 |
180.2 |
180.2 |
| C6 |
C7 |
O8 |
H7 |
120.0 |
119.9 |
| C6 |
C7 |
O8 |
H7A |
240.0 |
240.0 |
| H7 |
C7 |
O8 |
H7A |
120.0 |
120.0 |
| O10 |
C9 |
O8 |
C7 |
355.4 |
359.9 |
| H7 |
C7 |
C6 |
C4 |
211.5 |
30.1 |
| O8 |
C7 |
H7 |
C6 |
119.2 |
120.0 |
| C6 |
C7 |
H7 |
H7A |
120.4 |
120.0 |
| O8 |
C7 |
H7 |
H7A |
239.6 |
240.0 |
| C9 |
O8 |
C7 |
H7 |
339.0 |
60.1 |
| H7A |
C7 |
C6 |
C4 |
331.4 |
150.1 |
| O8 |
C7 |
H7A |
C6 |
240.8 |
240.0 |
| C6 |
C7 |
H7A |
H7 |
239.6 |
240.0 |
| O8 |
C7 |
H7A |
H7 |
120.4 |
120.0 |
| C9 |
O8 |
C7 |
H7A |
219.0 |
300.1 |
| P13 |
C12 |
N11 |
HN11 |
15.9 |
275.0 |
| H12 |
C12 |
P13 |
H12A |
120.0 |
120.0 |
| H12 |
C12 |
N11 |
HN11 |
135.9 |
35.0 |
| P13 |
C12 |
H12 |
H12A |
240.7 |
239.9 |
| H12A |
C12 |
N11 |
HN11 |
255.9 |
154.9 |
| P13 |
C12 |
H12A |
H12 |
119.3 |
120.1 |
| N14 |
P13 |
C12 |
H12 |
57.4 |
60.0 |
| N14 |
P13 |
C12 |
H12A |
297.4 |
300.0 |
| N14 |
P13 |
O55 |
HO55 |
234.5 |
59.9 |
| O54 |
P13 |
C12 |
H12 |
299.3 |
300.0 |
| O54 |
P13 |
C12 |
H12A |
179.3 |
179.9 |
| O54 |
P13 |
O55 |
HO55 |
0.0 |
180.0 |
| O55 |
P13 |
C12 |
H12 |
174.3 |
180.0 |
| O55 |
P13 |
C12 |
H12A |
54.3 |
60.0 |
| C38 |
C15 |
N14 |
HN14 |
33.9 |
1.9 |
| C16 |
C15 |
C38 |
H15 |
119.7 |
120.0 |
| C38 |
C15 |
C16 |
N18 |
89.4 |
300.0 |
| C16 |
C15 |
N14 |
HN14 |
151.8 |
121.9 |
| C38 |
C15 |
C16 |
H15 |
237.7 |
240.0 |
| O17 |
C16 |
C15 |
N18 |
180.4 |
180.0 |
| C15 |
C16 |
N18 |
C19 |
171.4 |
180.0 |
| C15 |
C16 |
N18 |
HN18 |
351.4 |
360.0 |
| H15 |
C15 |
N14 |
HN14 |
271.6 |
241.9 |
| H15 |
C15 |
C16 |
N18 |
211.7 |
60.0 |
| C41 |
C38 |
C15 |
H15 |
311.1 |
55.9 |
| H38 |
C38 |
C41 |
H38A |
120.0 |
120.0 |
| H38 |
C38 |
C15 |
H15 |
71.1 |
175.9 |
| C41 |
C38 |
H38 |
H38A |
241.0 |
240.0 |
| H38A |
C38 |
C15 |
H15 |
191.1 |
295.9 |
| C41 |
C38 |
H38A |
H38 |
119.0 |
120.1 |
| C42 |
C41 |
C38 |
H38 |
115.7 |
155.5 |
| C42 |
C41 |
C38 |
H38A |
355.6 |
35.5 |
| C42 |
C41 |
C50 |
H50 |
177.8 |
180.3 |
| C50 |
C41 |
C38 |
H38 |
295.5 |
335.9 |
| C50 |
C41 |
C38 |
H38A |
175.5 |
215.8 |
| C48 |
C50 |
C41 |
H50 |
180.0 |
180.1 |
| C41 |
C50 |
C48 |
H50 |
180.0 |
179.9 |
| C46 |
C48 |
C50 |
H50 |
183.9 |
180.1 |
| C44 |
C46 |
C48 |
H46 |
180.0 |
179.9 |
| C48 |
C46 |
C44 |
H44 |
181.7 |
180.0 |
| H48 |
C48 |
C50 |
H50 |
3.8 |
0.1 |
| C44 |
C46 |
C48 |
H48 |
176.3 |
179.9 |
| C46 |
C44 |
C42 |
H42 |
179.9 |
179.9 |
| H46 |
C46 |
C48 |
H48 |
356.3 |
360.0 |
| C44 |
C46 |
H46 |
C48 |
180.0 |
180.1 |
| H46 |
C46 |
C44 |
H44 |
1.8 |
359.9 |
| H44 |
C44 |
C46 |
C48 |
181.7 |
180.0 |
| H44 |
C44 |
C46 |
H46 |
1.8 |
359.9 |
| H44 |
C44 |
C42 |
H42 |
359.9 |
359.7 |
| H42 |
C42 |
C41 |
C50 |
180.3 |
180.0 |
| O17 |
C16 |
C15 |
H15 |
32.1 |
240.0 |
| C15 |
C16 |
O17 |
N18 |
179.6 |
180.0 |
| O17 |
C16 |
N18 |
C19 |
350.9 |
360.0 |
| O17 |
C16 |
N18 |
HN18 |
171.0 |
180.0 |
| N18 |
C16 |
C15 |
H15 |
211.7 |
60.0 |
| C19 |
N18 |
C16 |
HN18 |
180.0 |
180.0 |
| C16 |
N18 |
C19 |
C33 |
215.6 |
275.0 |
| C16 |
N18 |
C19 |
H19 |
330.2 |
35.0 |
| C16 |
N18 |
C19 |
HN18 |
180.0 |
180.0 |
| C20 |
C19 |
N18 |
H19 |
118.4 |
120.0 |
| C33 |
C19 |
N18 |
H19 |
245.3 |
240.0 |
| N18 |
C19 |
C33 |
O34 |
356.5 |
0.0 |
| N18 |
C19 |
C33 |
O35 |
175.9 |
180.0 |
| C16 |
N18 |
HN18 |
C19 |
180.0 |
180.0 |
| HN18 |
N18 |
C19 |
C33 |
35.5 |
95.0 |
| HN18 |
N18 |
C19 |
H19 |
150.2 |
215.1 |
| C20 |
C19 |
N18 |
HN18 |
268.6 |
335.0 |
| N18 |
C19 |
C20 |
H19 |
239.4 |
240.0 |
| C33 |
C19 |
C20 |
H19 |
114.4 |
120.0 |
| C20 |
C19 |
C33 |
O35 |
298.1 |
300.0 |
| C33 |
C19 |
N18 |
HN18 |
35.5 |
95.0 |
| N18 |
C19 |
C33 |
H19 |
120.2 |
120.0 |
| C20 |
C19 |
C33 |
H19 |
242.4 |
240.1 |
| O34 |
C33 |
C19 |
O35 |
180.6 |
180.0 |
| C19 |
C33 |
O35 |
HO35 |
180.6 |
180.0 |
| H19 |
C19 |
N18 |
HN18 |
150.2 |
215.1 |
| N18 |
C19 |
H19 |
C33 |
239.7 |
239.9 |
| H19 |
C19 |
C33 |
O34 |
236.3 |
240.0 |
| H19 |
C19 |
C33 |
O35 |
55.7 |
60.0 |
| O34 |
C33 |
C19 |
H19 |
236.3 |
240.0 |
| C19 |
C33 |
O34 |
O35 |
179.4 |
180.0 |
| O34 |
C33 |
O35 |
HO35 |
360.0 |
0.0 |
| O35 |
C33 |
C19 |
H19 |
55.7 |
60.0 |
| C19 |
C33 |
O35 |
O34 |
180.6 |
180.0 |
| C21 |
C20 |
C19 |
H19 |
182.5 |
55.0 |
| H20 |
C20 |
C21 |
H20A |
120.0 |
120.0 |
| H20 |
C20 |
C19 |
H19 |
302.5 |
175.0 |
| C21 |
C20 |
H20 |
H20A |
242.7 |
240.0 |
| H20A |
C20 |
C19 |
H19 |
62.5 |
295.0 |
| C21 |
C20 |
H20A |
H20 |
117.3 |
120.0 |
| C26 |
C21 |
C20 |
H20 |
144.6 |
55.0 |
| C26 |
C21 |
C20 |
H20A |
24.6 |
295.0 |
| C22 |
C21 |
C26 |
H21 |
239.5 |
120.0 |
| C22 |
C21 |
C20 |
H20 |
24.9 |
175.0 |
| C22 |
C21 |
C20 |
H20A |
264.9 |
55.0 |
| C26 |
C21 |
C22 |
H21 |
119.8 |
240.0 |
| H21 |
C21 |
C20 |
H20 |
264.4 |
295.0 |
| H21 |
C21 |
C20 |
H20A |
144.4 |
175.0 |
| H26 |
C26 |
C21 |
H21 |
59.9 |
180.0 |
| H26A |
C26 |
H26 |
H26B |
120.0 |
120.0 |
| H26A |
C26 |
C21 |
H21 |
179.9 |
299.9 |
| H26 |
C26 |
H26A |
H26B |
240.0 |
240.0 |
| H26B |
C26 |
C21 |
H21 |
299.9 |
60.0 |
| H26 |
C26 |
H26B |
H26A |
120.0 |
120.0 |
| H22 |
C22 |
C21 |
H21 |
300.0 |
300.0 |
| H22A |
C22 |
H22 |
H22B |
120.0 |
120.0 |
| H22A |
C22 |
C21 |
H21 |
60.1 |
60.0 |
| H22 |
C22 |
H22A |
H22B |
240.0 |
240.0 |
| H22B |
C22 |
C21 |
H21 |
180.1 |
180.0 |
| H22 |
C22 |
H22B |
H22A |
120.0 |
120.0 |
| C1 |
C2 |
C4 |
H2 |
180.0 |
179.6 |
| C6 |
C4 |
C2 |
H4 |
180.0 |
179.9 |
| C6 |
C4 |
H4 |
C2 |
180.0 |
180.1 |
| H4 |
C4 |
C2 |
H2 |
0.2 |
0.4 |
| H2 |
C2 |
C4 |
H4 |
0.2 |
0.4 |