PDB Chemical Component 1T6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1T6
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C3 |
C10 |
1.393 |
1.382 |
C3 |
C1 |
1.378 |
1.383 |
C10 |
C21 |
1.399 |
1.383 |
C1 |
C2 |
1.381 |
1.383 |
C31 |
C30 |
1.545 |
1.529 |
C21 |
C30 |
1.542 |
1.507 |
C21 |
C9 |
1.396 |
1.382 |
C2 |
C9 |
1.391 |
1.382 |
C30 |
C28 |
1.551 |
1.528 |
C30 |
C23 |
1.539 |
1.506 |
C28 |
C29 |
1.540 |
1.535 |
C11 |
C4 |
1.390 |
1.383 |
C11 |
C22 |
1.385 |
1.384 |
C4 |
C5 |
1.384 |
1.380 |
C29 |
C22 |
1.517 |
1.507 |
C29 |
N33 |
1.499 |
1.469 |
C22 |
C13 |
1.387 |
1.379 |
C23 |
C15 |
1.397 |
1.381 |
C23 |
C24 |
1.407 |
1.389 |
C15 |
C19 |
1.398 |
1.395 |
C5 |
C16 |
1.392 |
1.395 |
N32 |
C25 |
1.316 |
1.303 |
C13 |
C16 |
1.394 |
1.396 |
N33 |
C24 |
1.405 |
1.396 |
C16 |
C17 |
1.488 |
1.481 |
C24 |
C12 |
1.397 |
1.393 |
C19 |
C25 |
1.544 |
1.479 |
C19 |
C8 |
1.393 |
1.396 |
C25 |
N34 |
1.389 |
1.378 |
C6 |
C17 |
1.395 |
1.393 |
C6 |
C7 |
1.385 |
1.377 |
C17 |
C20 |
1.404 |
1.408 |
C12 |
C8 |
1.383 |
1.376 |
C7 |
C18 |
1.393 |
1.399 |
C20 |
C27 |
1.486 |
1.476 |
C20 |
C14 |
1.395 |
1.391 |
O37 |
C27 |
1.234 |
1.216 |
C27 |
O38 |
1.287 |
1.347 |
C18 |
C14 |
1.394 |
1.394 |
C18 |
C26 |
1.515 |
1.477 |
O36 |
C26 |
1.242 |
1.216 |
C26 |
N35 |
1.344 |
1.347 |
C13 |
H51 |
1.080 |
1.080 |
C15 |
H53 |
1.080 |
1.080 |
C11 |
H49 |
1.080 |
1.080 |
C12 |
H50 |
1.080 |
1.080 |
C1 |
H39 |
1.081 |
1.080 |
C2 |
H40 |
1.080 |
1.081 |
C3 |
H41 |
1.080 |
1.080 |
C4 |
H42 |
1.080 |
1.080 |
C5 |
H43 |
1.080 |
1.080 |
C6 |
H44 |
1.080 |
1.081 |
C7 |
H45 |
1.080 |
1.080 |
C8 |
H46 |
1.080 |
1.080 |
C9 |
H47 |
1.080 |
1.080 |
C10 |
H48 |
1.080 |
1.080 |
C14 |
H52 |
1.080 |
1.080 |
C28 |
H54 |
1.100 |
1.090 |
C28 |
H55 |
1.100 |
1.090 |
C29 |
H56 |
1.100 |
1.090 |
C31 |
H59 |
1.100 |
1.091 |
C31 |
H58 |
1.100 |
1.090 |
C31 |
H57 |
1.100 |
1.090 |
N32 |
H60 |
1.000 |
0.971 |
N33 |
H61 |
1.000 |
0.969 |
N34 |
H63 |
1.000 |
0.970 |
N35 |
H64 |
1.000 |
0.970 |
N35 |
H65 |
1.000 |
0.970 |
O38 |
H66 |
0.950 |
0.967 |
N34 |
H62 |
1.000 |
0.970 |
Bond Angles for 1T6
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C3 |
H41 |
119.9 |
120.1 |
C3 |
C10 |
H48 |
119.6 |
120.0 |
C3 |
C1 |
H39 |
120.2 |
120.0 |
C10 |
C21 |
C30 |
121.8 |
120.0 |
C1 |
C2 |
C9 |
120.5 |
120.0 |
C2 |
C1 |
H39 |
120.2 |
120.0 |
C1 |
C2 |
H40 |
119.8 |
119.9 |
C9 |
C21 |
C30 |
120.2 |
120.0 |
C21 |
C30 |
C28 |
104.3 |
109.3 |
C21 |
C30 |
C23 |
112.6 |
109.3 |
C21 |
C9 |
C2 |
120.8 |
120.0 |
C21 |
C9 |
H47 |
119.6 |
120.0 |
C9 |
C2 |
H40 |
119.7 |
120.1 |
C2 |
C9 |
H47 |
119.6 |
120.0 |
C30 |
C28 |
H54 |
108.9 |
109.6 |
C30 |
C28 |
H55 |
108.9 |
109.7 |
C28 |
C29 |
N33 |
107.6 |
107.8 |
C29 |
C28 |
H54 |
108.9 |
109.6 |
C29 |
C28 |
H55 |
109.0 |
109.6 |
C28 |
C29 |
H56 |
110.0 |
109.8 |
C11 |
C4 |
C5 |
120.3 |
120.1 |
C4 |
C11 |
H49 |
119.8 |
119.9 |
C11 |
C4 |
H42 |
119.8 |
119.9 |
C5 |
C4 |
H42 |
119.8 |
119.9 |
C4 |
C5 |
H43 |
119.9 |
120.1 |
N33 |
C29 |
H56 |
110.6 |
109.9 |
C29 |
N33 |
H61 |
106.5 |
120.5 |
C22 |
C13 |
H51 |
119.1 |
120.1 |
C23 |
C15 |
H53 |
119.4 |
119.8 |
C23 |
C24 |
C12 |
119.5 |
120.2 |
C15 |
C19 |
C25 |
120.9 |
120.0 |
C15 |
C19 |
C8 |
118.8 |
119.9 |
C19 |
C15 |
H53 |
119.4 |
119.9 |
N32 |
C25 |
N34 |
117.4 |
120.0 |
C13 |
C16 |
C17 |
120.1 |
120.2 |
C16 |
C13 |
H51 |
119.1 |
120.0 |
C16 |
C17 |
C20 |
121.7 |
120.1 |
C24 |
C12 |
C8 |
120.5 |
120.2 |
C24 |
C12 |
H50 |
119.8 |
119.9 |
C8 |
C19 |
C25 |
120.0 |
120.1 |
C19 |
C25 |
N34 |
120.1 |
120.0 |
C19 |
C8 |
C12 |
120.8 |
119.8 |
C19 |
C8 |
H46 |
119.6 |
120.1 |
C25 |
N34 |
H63 |
120.0 |
120.0 |
C25 |
N34 |
H62 |
120.0 |
120.0 |
C7 |
C6 |
H44 |
119.7 |
119.9 |
C6 |
C7 |
H45 |
119.5 |
119.9 |
C17 |
C20 |
C27 |
121.6 |
120.2 |
C17 |
C20 |
C14 |
120.6 |
119.7 |
C8 |
C12 |
H50 |
119.7 |
119.9 |
C12 |
C8 |
H46 |
119.6 |
120.1 |
C7 |
C18 |
C14 |
118.9 |
120.1 |
C7 |
C18 |
C26 |
119.0 |
119.9 |
C27 |
C20 |
C14 |
117.7 |
120.1 |
C20 |
C27 |
O38 |
113.2 |
120.0 |
C18 |
C14 |
C20 |
120.3 |
119.8 |
C20 |
C14 |
H52 |
119.8 |
120.1 |
O37 |
C27 |
O38 |
124.4 |
120.0 |
C27 |
O38 |
H66 |
109.5 |
117.0 |
C14 |
C18 |
C26 |
122.1 |
120.0 |
C18 |
C14 |
H52 |
119.8 |
120.1 |
C18 |
C26 |
N35 |
118.4 |
120.0 |
C26 |
N35 |
H64 |
120.0 |
120.0 |
C26 |
N35 |
H65 |
120.0 |
120.0 |
H54 |
C28 |
H55 |
109.5 |
109.6 |
H59 |
C31 |
H58 |
109.5 |
109.4 |
H59 |
C31 |
H57 |
109.5 |
109.5 |
H58 |
C31 |
H57 |
109.5 |
109.5 |
H63 |
N34 |
H62 |
120.0 |
120.0 |
H64 |
N35 |
H65 |
120.0 |
119.9 |
Torsion Angles for 1T6
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C3 |
C1 |
H39 |
180.5 |
180.0 |
C3 |
C10 |
C21 |
C30 |
184.5 |
180.0 |
C3 |
C1 |
C2 |
C9 |
0.1 |
359.8 |
C2 |
C1 |
C3 |
H39 |
180.0 |
180.2 |
C3 |
C1 |
C2 |
H40 |
180.1 |
180.0 |
C9 |
C21 |
C10 |
C30 |
175.9 |
179.7 |
C10 |
C21 |
C30 |
C28 |
99.9 |
299.6 |
C10 |
C21 |
C30 |
C23 |
220.7 |
60.7 |
C10 |
C21 |
C9 |
H47 |
180.2 |
180.2 |
C3 |
C1 |
C2 |
H39 |
180.0 |
179.8 |
C21 |
C9 |
C2 |
C1 |
359.6 |
359.9 |
C9 |
C2 |
C1 |
H40 |
180.0 |
179.8 |
C1 |
C2 |
C9 |
H47 |
179.6 |
180.0 |
C31 |
C30 |
C28 |
H54 |
49.7 |
171.2 |
C31 |
C30 |
C28 |
H55 |
169.1 |
50.9 |
C30 |
C21 |
C9 |
C2 |
176.1 |
180.0 |
C30 |
C21 |
C9 |
H47 |
356.1 |
359.9 |
C21 |
C30 |
C28 |
H54 |
292.1 |
51.7 |
C21 |
C30 |
C28 |
H55 |
51.5 |
291.4 |
C10 |
C21 |
C9 |
C30 |
184.1 |
180.3 |
C1 |
C2 |
C9 |
C21 |
359.6 |
359.9 |
C9 |
C21 |
C30 |
C28 |
284.1 |
119.9 |
C9 |
C21 |
C30 |
C23 |
44.9 |
240.9 |
C21 |
C9 |
C2 |
H40 |
179.6 |
179.7 |
C2 |
C9 |
C21 |
H47 |
180.0 |
180.1 |
C9 |
C2 |
C1 |
H39 |
180.1 |
180.0 |
C1 |
C2 |
C9 |
H40 |
180.0 |
180.2 |
C2 |
C9 |
C21 |
C30 |
176.1 |
180.0 |
C21 |
C9 |
C2 |
H47 |
180.0 |
179.9 |
C21 |
C30 |
C28 |
C23 |
121.6 |
120.3 |
C30 |
C28 |
C29 |
N33 |
302.8 |
296.8 |
C29 |
C28 |
C30 |
H54 |
239.7 |
119.8 |
C29 |
C28 |
C30 |
H55 |
120.3 |
240.2 |
C30 |
C28 |
C29 |
H56 |
63.3 |
56.5 |
H54 |
C28 |
C30 |
H55 |
240.6 |
120.3 |
C21 |
C30 |
C23 |
C28 |
243.3 |
239.7 |
C30 |
C23 |
C15 |
H53 |
348.5 |
359.8 |
C21 |
C30 |
C28 |
C29 |
171.8 |
171.6 |
C30 |
C28 |
C29 |
H54 |
120.3 |
240.2 |
C30 |
C28 |
C29 |
H55 |
239.7 |
119.9 |
N33 |
C29 |
C28 |
H56 |
239.5 |
240.3 |
C28 |
C29 |
N33 |
H61 |
164.6 |
224.9 |
H54 |
C28 |
C29 |
H55 |
119.4 |
239.7 |
C5 |
C4 |
C11 |
H42 |
180.0 |
179.7 |
C11 |
C4 |
C5 |
H43 |
180.6 |
180.1 |
C11 |
C22 |
C13 |
H51 |
179.1 |
180.3 |
C5 |
C4 |
C11 |
H49 |
179.0 |
180.0 |
C11 |
C4 |
C5 |
H42 |
180.0 |
180.3 |
C29 |
C22 |
C13 |
H51 |
358.8 |
0.3 |
N33 |
C29 |
C28 |
H54 |
182.5 |
56.6 |
N33 |
C29 |
C28 |
H55 |
63.1 |
176.9 |
C28 |
C29 |
N33 |
H56 |
120.2 |
119.7 |
C16 |
C13 |
C22 |
H51 |
180.0 |
179.7 |
C23 |
C15 |
C19 |
C25 |
184.6 |
180.3 |
C23 |
C15 |
C19 |
C8 |
359.2 |
0.2 |
C19 |
C15 |
C23 |
H53 |
180.0 |
179.8 |
C21 |
C30 |
C23 |
C24 |
217.1 |
219.0 |
C24 |
C23 |
C15 |
H53 |
178.5 |
180.0 |
C23 |
C24 |
C12 |
C8 |
357.8 |
359.5 |
C23 |
C24 |
C12 |
H50 |
177.8 |
179.8 |
C23 |
C15 |
C19 |
H53 |
180.0 |
180.2 |
C8 |
C19 |
C15 |
C25 |
174.6 |
180.0 |
C15 |
C19 |
C25 |
N34 |
165.4 |
180.0 |
C15 |
C19 |
C8 |
C12 |
1.6 |
359.6 |
C15 |
C19 |
C8 |
H46 |
181.6 |
180.1 |
C5 |
C16 |
C13 |
H51 |
180.5 |
180.0 |
C19 |
C25 |
N32 |
N34 |
185.7 |
180.1 |
N32 |
C25 |
N34 |
H63 |
185.5 |
180.0 |
N32 |
C25 |
N34 |
H62 |
5.5 |
0.1 |
C22 |
C13 |
C16 |
H51 |
180.0 |
180.3 |
C13 |
C16 |
C17 |
C20 |
58.8 |
238.3 |
N33 |
C24 |
C12 |
H50 |
359.8 |
359.6 |
C17 |
C16 |
C13 |
H51 |
6.5 |
360.0 |
C16 |
C17 |
C20 |
C27 |
355.9 |
359.9 |
C16 |
C17 |
C20 |
C14 |
175.2 |
180.5 |
C19 |
C8 |
C12 |
C24 |
359.9 |
0.6 |
C8 |
C12 |
C24 |
H50 |
180.0 |
179.7 |
C24 |
C12 |
C8 |
H46 |
179.9 |
180.0 |
C15 |
C19 |
C25 |
C8 |
174.6 |
180.0 |
C25 |
C19 |
C15 |
H53 |
4.6 |
0.1 |
N32 |
C25 |
C19 |
N34 |
174.2 |
179.9 |
C25 |
C19 |
C8 |
C12 |
176.3 |
179.5 |
C25 |
C19 |
C8 |
H46 |
356.3 |
0.1 |
C19 |
C25 |
N34 |
H63 |
360.0 |
359.9 |
C19 |
C25 |
N34 |
H62 |
180.0 |
180.0 |
C15 |
C19 |
C8 |
C25 |
185.3 |
180.0 |
C8 |
C19 |
C15 |
H53 |
179.2 |
180.0 |
C24 |
C12 |
C8 |
C19 |
359.9 |
0.6 |
C8 |
C19 |
C25 |
N34 |
350.8 |
0.0 |
C19 |
C8 |
C12 |
H50 |
179.9 |
180.3 |
C12 |
C8 |
C19 |
H46 |
180.0 |
179.4 |
H63 |
N34 |
C25 |
H62 |
180.0 |
180.0 |
C6 |
C17 |
C20 |
C14 |
357.9 |
0.6 |
C6 |
C7 |
C18 |
C14 |
357.5 |
0.1 |
C6 |
C7 |
C18 |
C26 |
179.2 |
179.7 |
C27 |
C20 |
C17 |
C14 |
180.7 |
179.4 |
C17 |
C20 |
C27 |
O38 |
247.7 |
187.2 |
C18 |
C14 |
C20 |
C17 |
0.0 |
360.0 |
C17 |
C20 |
C14 |
H52 |
180.0 |
180.0 |
C24 |
C12 |
C8 |
H50 |
180.0 |
180.3 |
C12 |
C8 |
C19 |
C25 |
176.3 |
179.5 |
C19 |
C8 |
C12 |
H46 |
180.0 |
180.6 |
C7 |
C18 |
C14 |
C20 |
2.3 |
359.7 |
C14 |
C18 |
C7 |
C26 |
178.4 |
180.4 |
C7 |
C18 |
C14 |
H52 |
182.2 |
179.7 |
C7 |
C18 |
C26 |
N35 |
184.7 |
0.4 |
C17 |
C20 |
C27 |
C14 |
179.3 |
180.6 |
C18 |
C14 |
C20 |
C27 |
179.3 |
180.6 |
C27 |
C20 |
C14 |
H52 |
359.3 |
0.6 |
O37 |
C27 |
C20 |
O38 |
175.0 |
180.0 |
C20 |
C27 |
O38 |
H66 |
174.8 |
180.0 |
C17 |
C20 |
C14 |
C27 |
180.7 |
179.4 |
C14 |
C20 |
C27 |
O38 |
68.4 |
6.6 |
C20 |
C14 |
C18 |
C26 |
180.6 |
180.1 |
C18 |
C14 |
C20 |
H52 |
180.0 |
180.0 |
C20 |
C27 |
O37 |
O38 |
185.6 |
180.0 |
O37 |
C27 |
O38 |
H66 |
360.0 |
360.0 |
O38 |
C27 |
C20 |
C14 |
68.4 |
6.6 |
C17 |
C20 |
C14 |
C18 |
0.0 |
360.0 |
C7 |
C18 |
C14 |
C26 |
181.7 |
179.6 |
C27 |
C20 |
C14 |
C18 |
179.3 |
180.6 |
C20 |
C14 |
C18 |
H52 |
180.0 |
180.0 |
C14 |
C18 |
C26 |
N35 |
6.4 |
180.0 |
C7 |
C18 |
C26 |
C14 |
178.3 |
180.4 |
C26 |
C18 |
C14 |
C20 |
180.6 |
180.1 |
C26 |
C18 |
C14 |
H52 |
0.5 |
0.1 |
C18 |
C26 |
N35 |
H64 |
183.8 |
359.9 |
C18 |
C26 |
N35 |
H65 |
3.8 |
180.0 |
O36 |
C26 |
N35 |
H64 |
360.0 |
180.0 |
O36 |
C26 |
N35 |
H65 |
180.0 |
0.1 |
H64 |
N35 |
C26 |
H65 |
180.0 |
179.9 |
H51 |
C13 |
C16 |
C17 |
6.5 |
360.0 |
H53 |
C15 |
C19 |
C25 |
4.6 |
0.1 |
H53 |
C15 |
C19 |
C8 |
179.2 |
180.0 |
H49 |
C11 |
C4 |
C5 |
179.0 |
180.0 |
H49 |
C11 |
C4 |
H42 |
359.0 |
0.3 |
C24 |
C12 |
H50 |
C8 |
180.0 |
179.7 |
H50 |
C12 |
C8 |
H46 |
359.9 |
359.7 |
H39 |
C1 |
C2 |
C9 |
180.1 |
180.0 |
H39 |
C1 |
C2 |
H40 |
0.1 |
0.2 |
C1 |
C2 |
H40 |
C9 |
180.0 |
179.8 |
H40 |
C2 |
C1 |
H39 |
0.1 |
0.2 |
H40 |
C2 |
C9 |
H47 |
359.6 |
359.8 |
H41 |
C3 |
C10 |
H48 |
359.3 |
0.1 |
H41 |
C3 |
C1 |
H39 |
0.4 |
0.0 |
C11 |
C4 |
H42 |
C5 |
180.0 |
179.7 |
H42 |
C4 |
C11 |
H49 |
359.0 |
0.3 |
H42 |
C4 |
C5 |
H43 |
0.6 |
359.8 |
H43 |
C5 |
C4 |
H42 |
0.6 |
359.8 |
H44 |
C6 |
C7 |
H45 |
0.4 |
359.8 |
H45 |
C7 |
C6 |
H44 |
0.4 |
359.8 |
H45 |
C7 |
C18 |
C14 |
177.5 |
180.0 |
H45 |
C7 |
C18 |
C26 |
359.2 |
359.6 |
H46 |
C8 |
C19 |
C25 |
356.3 |
0.1 |
C19 |
C8 |
H46 |
C12 |
180.0 |
179.4 |
H46 |
C8 |
C12 |
H50 |
359.9 |
359.7 |
H47 |
C9 |
C21 |
C30 |
356.1 |
359.9 |
C21 |
C9 |
H47 |
C2 |
180.0 |
180.1 |
H47 |
C9 |
C2 |
H40 |
359.6 |
359.8 |
H48 |
C10 |
C3 |
H41 |
359.3 |
0.1 |
H48 |
C10 |
C21 |
C30 |
4.5 |
359.9 |
C18 |
C14 |
H52 |
C20 |
180.0 |
180.0 |
H52 |
C14 |
C18 |
C26 |
0.5 |
0.1 |
C30 |
C28 |
H54 |
H55 |
119.0 |
239.6 |
H54 |
C28 |
C29 |
N33 |
182.5 |
56.6 |
C29 |
C28 |
H54 |
H55 |
240.9 |
120.3 |
H54 |
C28 |
C29 |
H56 |
303.0 |
176.3 |
C30 |
C28 |
H55 |
H54 |
241.0 |
120.3 |
H55 |
C28 |
C29 |
N33 |
63.1 |
176.9 |
C29 |
C28 |
H55 |
H54 |
119.1 |
239.7 |
H55 |
C28 |
C29 |
H56 |
183.6 |
296.6 |
C28 |
C29 |
H56 |
N33 |
241.3 |
241.6 |
H56 |
C29 |
C28 |
H54 |
303.0 |
176.3 |
H56 |
C29 |
C28 |
H55 |
183.6 |
296.6 |
H56 |
C29 |
N33 |
H61 |
44.5 |
105.3 |
H58 |
C31 |
H59 |
H57 |
120.0 |
120.0 |
H59 |
C31 |
H58 |
H57 |
240.0 |
240.0 |
H59 |
C31 |
H57 |
H58 |
120.0 |
119.9 |
H60 |
N32 |
C25 |
N34 |
0.0 |
359.9 |
H61 |
N33 |
C29 |
H56 |
44.5 |
105.3 |
C25 |
N34 |
H63 |
H62 |
180.0 |
180.0 |
C26 |
N35 |
H64 |
H65 |
180.0 |
180.1 |
C26 |
N35 |
H65 |
H64 |
180.0 |
179.9 |
C25 |
N34 |
H62 |
H63 |
180.0 |
180.0 |