PDB Chemical Component 1SQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1SQ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.360 |
1.419 |
| N1 |
HN11 |
1.000 |
0.996 |
| N1 |
HN12 |
1.000 |
0.996 |
| C2 |
N3 |
1.350 |
1.352 |
| C2 |
C11 |
1.410 |
1.396 |
| N3 |
C4 |
1.338 |
1.349 |
| C4 |
C5 |
1.381 |
1.387 |
| C4 |
H4 |
1.080 |
1.085 |
| C5 |
C6 |
1.387 |
1.399 |
| C5 |
H5 |
1.080 |
1.086 |
| C6 |
C11 |
1.406 |
1.410 |
| C6 |
C7 |
1.390 |
1.404 |
| C7 |
C8 |
1.381 |
1.396 |
| C7 |
H7 |
1.080 |
1.089 |
| C8 |
C9 |
1.378 |
1.393 |
| C8 |
H8 |
1.080 |
1.086 |
| C9 |
C10 |
1.375 |
1.395 |
| C9 |
H9 |
1.080 |
1.086 |
| C10 |
C11 |
1.387 |
1.404 |
| C10 |
H10 |
1.080 |
1.087 |
Bond Angles for 1SQ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
HN11 |
109.5 |
118.7 |
| C2 |
N1 |
HN12 |
109.5 |
118.7 |
| N1 |
C2 |
N3 |
117.5 |
116.4 |
| N1 |
C2 |
C11 |
119.9 |
119.2 |
| HN11 |
N1 |
HN12 |
109.5 |
122.2 |
| N3 |
C2 |
C11 |
122.5 |
124.4 |
| C2 |
N3 |
C4 |
117.6 |
116.4 |
| C2 |
C11 |
C6 |
118.5 |
117.5 |
| C2 |
C11 |
C10 |
122.4 |
122.7 |
| N3 |
C4 |
C5 |
123.6 |
124.2 |
| N3 |
C4 |
H4 |
118.2 |
115.1 |
| C5 |
C4 |
H4 |
118.2 |
120.6 |
| C4 |
C5 |
C6 |
119.7 |
118.4 |
| C4 |
C5 |
H5 |
120.2 |
120.0 |
| C6 |
C5 |
H5 |
120.1 |
121.6 |
| C5 |
C6 |
C11 |
117.9 |
119.0 |
| C5 |
C6 |
C7 |
122.6 |
121.9 |
| C7 |
C6 |
C11 |
119.5 |
119.1 |
| C6 |
C11 |
C10 |
119.1 |
119.8 |
| C6 |
C7 |
C8 |
120.3 |
120.6 |
| C6 |
C7 |
H7 |
119.8 |
120.6 |
| C8 |
C7 |
H7 |
119.9 |
118.8 |
| C7 |
C8 |
C9 |
120.1 |
120.1 |
| C7 |
C8 |
H8 |
119.9 |
119.9 |
| C9 |
C8 |
H8 |
120.0 |
120.0 |
| C8 |
C9 |
C10 |
120.3 |
120.1 |
| C8 |
C9 |
H9 |
119.9 |
120.0 |
| C10 |
C9 |
H9 |
119.8 |
119.9 |
| C9 |
C10 |
C11 |
120.7 |
120.3 |
| C9 |
C10 |
H10 |
119.7 |
118.0 |
| C11 |
C10 |
H10 |
119.6 |
121.7 |
Torsion Angles for 1SQ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| HN11 |
N1 |
C2 |
HN12 |
240.0 |
173.7 |
| N3 |
C2 |
N1 |
C11 |
182.9 |
179.9 |
| N1 |
C2 |
N3 |
C4 |
180.6 |
180.0 |
| N1 |
C2 |
C11 |
C6 |
180.1 |
180.0 |
| N1 |
C2 |
C11 |
C10 |
1.6 |
360.0 |
| C2 |
N1 |
HN11 |
HN12 |
120.0 |
186.5 |
| HN11 |
N1 |
C2 |
N3 |
262.5 |
295.1 |
| HN11 |
N1 |
C2 |
C11 |
79.6 |
115.1 |
| C2 |
N1 |
HN12 |
HN11 |
240.0 |
173.5 |
| HN12 |
N1 |
C2 |
N3 |
22.5 |
121.3 |
| HN12 |
N1 |
C2 |
C11 |
199.6 |
301.4 |
| N3 |
C2 |
N1 |
HN11 |
262.5 |
295.1 |
| N3 |
C2 |
N1 |
HN12 |
22.5 |
121.3 |
| N1 |
C2 |
N3 |
C11 |
177.0 |
180.1 |
| N3 |
C2 |
C11 |
C6 |
357.1 |
0.0 |
| N3 |
C2 |
C11 |
C10 |
178.5 |
180.0 |
| C2 |
N3 |
C4 |
C5 |
357.8 |
0.1 |
| C2 |
N3 |
C4 |
H4 |
177.8 |
180.0 |
| C11 |
C2 |
N1 |
HN11 |
79.6 |
115.1 |
| C11 |
C2 |
N1 |
HN12 |
199.6 |
301.4 |
| N1 |
C2 |
C11 |
N3 |
183.1 |
179.9 |
| C11 |
C2 |
N3 |
C4 |
3.6 |
359.9 |
| C5 |
C6 |
C11 |
C2 |
0.8 |
360.0 |
| C7 |
C6 |
C11 |
C2 |
180.8 |
180.0 |
| C6 |
C11 |
C2 |
C10 |
178.5 |
180.0 |
| C9 |
C10 |
C11 |
C2 |
178.9 |
180.0 |
| C2 |
C11 |
C10 |
H10 |
359.0 |
0.1 |
| C4 |
N3 |
C2 |
C11 |
3.6 |
359.9 |
| C5 |
C4 |
N3 |
H4 |
180.0 |
180.1 |
| N3 |
C4 |
C5 |
C6 |
0.1 |
359.9 |
| N3 |
C4 |
C5 |
H5 |
180.1 |
180.0 |
| N3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
| C4 |
C5 |
C6 |
C11 |
0.6 |
0.0 |
| C4 |
C5 |
C6 |
C7 |
180.5 |
180.1 |
| N3 |
C4 |
H4 |
C5 |
180.0 |
180.1 |
| H4 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
| H4 |
C4 |
C5 |
H5 |
0.1 |
0.1 |
| C2 |
C11 |
C6 |
C5 |
0.8 |
360.0 |
| C6 |
C5 |
C4 |
H4 |
180.1 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
| C7 |
C6 |
C5 |
C11 |
179.9 |
180.0 |
| C5 |
C6 |
C11 |
C10 |
179.3 |
180.0 |
| C5 |
C6 |
C7 |
C8 |
180.2 |
180.0 |
| C5 |
C6 |
C7 |
H7 |
0.2 |
0.0 |
| H5 |
C5 |
C4 |
H4 |
0.1 |
0.1 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
| H5 |
C5 |
C6 |
C11 |
180.6 |
180.0 |
| H5 |
C5 |
C6 |
C7 |
0.5 |
360.0 |
| C2 |
C11 |
C6 |
C10 |
181.4 |
180.0 |
| C11 |
C6 |
C5 |
H5 |
180.6 |
180.0 |
| C5 |
C6 |
C11 |
C7 |
179.9 |
180.0 |
| C11 |
C6 |
C7 |
C8 |
0.1 |
0.1 |
| C11 |
C6 |
C7 |
H7 |
180.1 |
180.0 |
| C9 |
C10 |
C11 |
C6 |
0.4 |
360.0 |
| C6 |
C11 |
C10 |
H10 |
180.5 |
180.1 |
| C2 |
C11 |
C6 |
C7 |
180.8 |
180.0 |
| C7 |
C6 |
C5 |
H5 |
0.5 |
360.0 |
| C5 |
C6 |
C7 |
C11 |
180.1 |
180.0 |
| C7 |
C6 |
C11 |
C10 |
359.4 |
360.0 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
| C6 |
C7 |
C8 |
C9 |
0.5 |
359.9 |
| C6 |
C7 |
C8 |
H8 |
180.5 |
180.0 |
| C8 |
C7 |
C6 |
C11 |
0.1 |
0.1 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
| C9 |
C8 |
C7 |
H8 |
180.0 |
179.9 |
| C7 |
C8 |
C9 |
C10 |
359.3 |
0.0 |
| C7 |
C8 |
C9 |
H9 |
179.3 |
180.0 |
| H7 |
C7 |
C6 |
C11 |
180.1 |
180.0 |
| C6 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
| H7 |
C7 |
C8 |
C9 |
180.5 |
180.0 |
| H7 |
C7 |
C8 |
H8 |
0.5 |
0.0 |
| C9 |
C8 |
C7 |
H7 |
180.5 |
180.0 |
| C7 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
| C8 |
C9 |
C10 |
C11 |
0.2 |
0.0 |
| C8 |
C9 |
C10 |
H10 |
180.2 |
179.9 |
| H8 |
C8 |
C7 |
H7 |
0.5 |
0.0 |
| C7 |
C8 |
H8 |
C9 |
180.0 |
179.9 |
| H8 |
C8 |
C9 |
C10 |
179.3 |
179.9 |
| H8 |
C8 |
C9 |
H9 |
359.3 |
359.9 |
| C2 |
C11 |
C10 |
C9 |
178.9 |
180.0 |
| C6 |
C11 |
C10 |
C9 |
0.4 |
360.0 |
| C10 |
C9 |
C8 |
H8 |
179.3 |
179.9 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
| C11 |
C10 |
C9 |
H10 |
180.0 |
180.1 |
| H9 |
C9 |
C8 |
H8 |
359.3 |
359.9 |
| C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
| H9 |
C9 |
C10 |
C11 |
180.2 |
180.0 |
| H9 |
C9 |
C10 |
H10 |
0.2 |
359.9 |
| C2 |
C11 |
C10 |
C6 |
178.5 |
180.0 |
| C11 |
C10 |
C9 |
H9 |
180.2 |
180.0 |
| C9 |
C10 |
C11 |
H10 |
180.0 |
179.9 |
| H10 |
C10 |
C9 |
H9 |
0.2 |
359.9 |
| C9 |
C10 |
H10 |
C11 |
180.0 |
180.1 |