PDB Chemical Component 1PU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1PU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.518	1.503
C1	C3	1.428	1.399
C1	C4	1.414	1.382
C2	C6	1.536	1.537
C2	N5	1.461	1.484
C2	H2	1.115	1.090
C3	C7	1.460	1.479
C3	C8	1.406	1.395
C7	N5	1.349	1.336
C7	O13	1.209	1.214
C6	C12	1.541	1.546
C6	H61	1.115	1.089
C6	H62	1.115	1.090
C4	C9	1.410	1.391
C4	N10	1.449	1.398
N5	C11	1.469	1.472
C8	C14	1.389	1.380
C8	H8	1.103	1.080
C9	C14	1.405	1.382
C9	H9	1.103	1.078
N10	C15	1.322	1.348
N10	H10	1.020	0.970
C11	C12	1.535	1.547
C11	H111	1.115	1.090
C11	H112	1.115	1.088
C12	H121	1.115	1.091
C12	H122	1.115	1.090
C14	H14	1.103	1.080
C15	N16	1.326	1.346
C15	O17	1.235	1.215
N16	C18	1.421	1.394
N16	H16	1.020	0.970
C18	C19	1.395	1.390
C18	N20	1.333	1.323
C19	C21	1.412	1.384
C19	H19	1.102	1.080
N20	C22	1.331	1.319
C21	C23	1.402	1.387
C21	H21	1.103	1.079
C22	C23	1.396	1.380
C22	H22	1.103	1.080
C23	H23	1.103	1.080

Bond Angles for 1PU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C3	107.2	106.1
C2	C1	C4	132.3	133.8
C1	C2	C6	118.8	112.0
C1	C2	N5	102.0	105.3
C1	C2	H2	105.7	111.8
C3	C1	C4	120.5	120.1
C1	C3	C7	109.6	108.0
C1	C3	C8	120.9	119.4
C1	C4	C9	117.3	119.9
C1	C4	N10	119.3	120.0
C6	C2	N5	99.1	104.3
C6	C2	H2	108.4	111.4
C2	C6	C12	103.9	104.6
C2	C6	H61	114.3	110.4
C2	C6	H62	114.3	110.5
N5	C2	H2	123.7	111.6
C2	N5	C7	114.9	107.4
C2	N5	C11	115.3	104.0
C7	C3	C8	129.5	132.6
C3	C7	N5	106.2	109.4
C3	C7	O13	125.6	125.3
C3	C8	C14	118.3	120.1
C3	C8	H8	121.5	119.9
N5	C7	O13	128.1	125.3
C7	N5	C11	123.0	148.6
C12	C6	H61	114.3	110.4
C12	C6	H62	114.3	110.3
C6	C12	C11	105.7	104.9
C6	C12	H121	113.6	110.3
C6	C12	H122	113.6	110.4
H61	C6	H62	96.1	110.4
C9	C4	N10	123.5	120.1
C4	C9	C14	121.8	120.1
C4	C9	H9	119.3	119.9
C4	N10	C15	133.2	120.0
C4	N10	H10	104.0	120.0
N5	C11	C12	101.6	104.2
N5	C11	H111	115.2	110.4
N5	C11	H112	115.2	110.6
C14	C8	H8	120.2	120.0
C8	C14	C9	121.2	120.4
C8	C14	H14	118.8	119.8
C14	C9	H9	118.9	120.0
C9	C14	H14	120.0	119.8
C15	N10	H10	104.1	120.0
N10	C15	N16	116.6	120.0
N10	C15	O17	121.4	119.9
C12	C11	H111	115.2	110.4
C12	C11	H112	115.2	110.5
C11	C12	H121	113.6	110.4
C11	C12	H122	113.6	110.4
H111	C11	H112	95.3	110.5
H121	C12	H122	96.8	110.4
N16	C15	O17	122.0	120.1
C15	N16	C18	133.1	120.0
C15	N16	H16	108.9	120.0
C18	N16	H16	118.0	119.9
N16	C18	C19	123.9	119.7
N16	C18	N20	115.8	119.7
C19	C18	N20	120.4	120.6
C18	C19	C21	118.1	119.1
C18	C19	H19	120.4	120.5
C18	N20	C22	122.8	121.6
C21	C19	H19	121.5	120.4
C19	C21	C23	120.0	118.5
C19	C21	H21	120.4	120.8
N20	C22	C23	120.8	120.8
N20	C22	H22	117.3	119.5
C23	C21	H21	119.7	120.8
C21	C23	C22	118.0	119.4
C21	C23	H23	121.2	120.3
C23	C22	H22	122.0	119.6
C22	C23	H23	120.8	120.3

Torsion Angles for 1PU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C1	C2	C4	179.5	180.8
C2	C1	C3	C7	0.1	360.0
C2	C1	C3	C8	179.9	180.8
C2	C1	C4	C9	180.1	179.9
C2	C1	C4	N10	0.0	0.1
C6	C2	C1	N5	252.4	247.2
C6	C2	C1	H2	121.9	125.9
C1	C2	C6	C12	146.0	139.0
C1	C2	C6	H61	20.7	20.2
C1	C2	C6	H62	271.2	257.7
N5	C2	C1	H2	229.5	238.7
C1	C2	N5	C7	360.0	19.2
C1	C2	N5	C11	207.9	200.1
C2	C1	C3	C4	180.4	179.4
C3	C1	C2	C6	252.4	236.1
C3	C1	C2	N5	360.0	348.9
C3	C1	C2	H2	130.5	110.2
C3	C1	C4	C9	0.6	359.0
C3	C1	C4	N10	180.6	179.3
C7	C3	C1	C8	180.2	179.2
C1	C3	C7	N5	359.9	12.7
C1	C3	C7	O13	180.0	192.6
C1	C3	C8	C14	0.2	359.0
C1	C3	C8	H8	180.2	179.0
C2	C1	C4	C3	179.5	180.9
C4	C1	C2	C6	72.8	55.4
C4	C1	C2	N5	180.4	168.1
C4	C1	C2	H2	311.0	289.5
C4	C1	C3	C7	179.7	180.6
C4	C1	C3	C8	359.5	1.4
C9	C4	C1	N10	180.0	179.7
C1	C4	C9	C14	359.6	0.2
C1	C4	C9	H9	179.7	180.2
C1	C4	N10	C15	178.4	204.4
C1	C4	N10	H10	53.2	24.4
C6	C2	C1	C3	252.4	236.1
C6	C2	C1	C4	72.8	55.4
C1	C2	C6	N5	109.2	113.4
C1	C2	C6	H2	239.5	233.9
N5	C2	C6	H2	130.2	120.6
C6	C2	N5	C7	122.2	137.3
C6	C2	N5	C11	330.1	318.3
C12	C6	C2	H61	125.3	118.8
C12	C6	C2	H62	234.7	241.3
C2	C6	C12	C11	326.7	358.9
C2	C6	C12	H121	201.4	240.1
C2	C6	C12	H122	91.9	117.7
H61	C6	C2	H62	109.5	122.5
N5	C2	C1	C3	360.0	348.9
N5	C2	C1	C4	180.4	168.1
C1	C2	N5	C6	237.7	241.9
C1	C2	N5	H2	118.4	121.5
C6	C2	N5	H2	240.6	239.6
N5	C2	C6	C12	36.7	25.7
N5	C2	C6	H61	271.4	266.9
N5	C2	C6	H62	162.0	144.4
C3	C7	N5	C2	0.1	340.4
C2	N5	C7	O13	179.9	160.4
C7	N5	C2	C11	152.1	179.0
C2	N5	C11	C12	9.8	40.8
C2	N5	C11	H111	244.5	159.5
C2	N5	C11	H112	135.1	282.1
H2	C2	C1	C3	130.5	110.2
H2	C2	C1	C4	311.0	289.5
C1	C2	H2	C6	128.4	126.2
C1	C2	H2	N5	243.4	242.4
C6	C2	H2	N5	115.0	116.2
H2	C2	C6	C12	266.5	265.1
H2	C2	C6	H61	141.2	146.3
H2	C2	C6	H62	31.8	23.8
H2	C2	N5	C7	241.6	257.7
H2	C2	N5	C11	89.5	78.7
C7	C3	C1	C4	179.7	180.6
C1	C3	C7	C8	179.8	180.9
C2	N5	C7	C3	0.1	340.4
C7	C3	C8	C14	180.0	180.0
C7	C3	C8	H8	359.9	360.0
N5	C7	C3	O13	179.8	180.0
C3	C7	N5	C11	149.8	158.6
C8	C3	C1	C4	359.5	1.4
C1	C3	C8	C7	180.3	179.0
C8	C3	C7	N5	180.1	191.7
C8	C3	C7	O13	0.3	11.7
C14	C8	C3	H8	180.0	180.0
C3	C8	C14	C9	0.0	0.2
C3	C8	C14	H14	180.0	180.3
C7	N5	C2	H2	241.6	257.7
C2	N5	C7	C11	210.3	181.8
N5	C7	C3	C8	180.1	191.7
C3	C7	N5	O13	180.2	180.0
C7	N5	C11	C12	220.2	222.6
C7	N5	C11	H111	94.9	341.3
C7	N5	C11	H112	345.5	103.9
O13	C7	C3	C8	0.3	11.7
C3	C7	O13	N5	179.8	180.0
O13	C7	N5	C11	329.7	338.6
C12	C6	C2	N5	36.7	25.7
C12	C6	C2	H2	266.5	265.1
C2	C6	C12	H61	234.7	241.2
C2	C6	C12	H62	125.3	118.8
H61	C6	C12	H62	250.5	237.6
N5	C11	C12	C6	15.1	336.0
C6	C12	C11	H111	140.4	217.4
C6	C12	C11	H112	249.9	94.8
C11	C12	C6	H121	125.3	118.8
C11	C12	C6	H122	234.7	241.2
H121	C12	C6	H122	109.5	122.3
H61	C6	C2	N5	271.4	266.9
H61	C6	C2	H2	141.2	146.3
C2	C6	H61	C12	119.5	115.1
C2	C6	H61	H62	239.8	237.5
C12	C6	H61	H62	120.2	122.3
H61	C6	C12	C11	91.9	117.7
H61	C6	C12	H121	326.7	358.9
H61	C6	C12	H122	217.2	236.5
H62	C6	C2	N5	162.0	144.4
H62	C6	C2	H2	31.8	23.8
C2	C6	H62	C12	240.5	244.9
C2	C6	H62	H61	120.2	122.5
C12	C6	H62	H61	239.8	237.6
H62	C6	C12	C11	201.4	240.1
H62	C6	C12	H121	76.1	121.3
H62	C6	C12	H122	326.7	358.9
C1	C4	C9	N10	180.0	180.3
C9	C4	N10	C15	358.4	24.7
C9	C4	N10	H10	233.2	204.7
C8	C14	C9	C4	0.1	0.2
C14	C9	C4	H9	180.0	180.0
C4	C9	C14	H14	180.0	180.1
C1	C4	N10	C9	180.0	179.7
N10	C4	C9	C14	179.7	179.9
N10	C4	C9	H9	359.7	359.9
C15	N10	C4	H10	125.3	180.0
C4	N10	C15	N16	182.9	185.9
C4	N10	C15	O17	3.5	6.1
C11	N5	C2	H2	89.5	78.7
C2	N5	C11	C7	149.6	178.2
C11	N5	C7	O13	329.7	338.6
C6	C12	C11	N5	15.1	336.0
C12	C11	N5	H111	125.3	241.4
C12	C11	N5	H112	234.7	118.7
N5	C11	C12	H121	140.4	94.8
N5	C11	C12	H122	249.8	217.1
H111	C11	N5	H112	109.5	237.4
C3	C8	C14	H8	180.0	180.0
C4	C9	C14	C8	0.1	0.2
C8	C14	C9	H9	180.0	180.2
C9	C14	C8	H14	180.0	179.9
C3	C8	H8	C14	180.0	180.0
H8	C8	C14	C9	180.0	180.2
H8	C8	C14	H14	0.0	0.3
C14	C9	C4	N10	179.7	179.9
C4	C9	C14	H9	180.0	180.0
C9	C14	C8	H8	180.0	180.2
C8	C14	C9	H14	180.0	180.1
H9	C9	C4	N10	359.7	359.9
C4	C9	H9	C14	180.0	180.0
H9	C9	C14	H14	0.0	0.1
C4	N10	C15	H10	234.8	180.0
N16	C15	N10	O17	179.4	179.8
N10	C15	N16	C18	351.1	175.2
N10	C15	N16	H16	171.1	355.1
C4	N10	H10	C15	142.1	180.0
H10	N10	C15	N16	308.2	5.9
H10	N10	C15	O17	128.8	186.0
C11	C12	C6	H61	91.9	117.7
C11	C12	C6	H62	201.4	240.1
C6	C12	C11	H121	234.7	241.2
C6	C12	C11	H122	125.3	118.9
N5	C11	C12	H111	234.7	118.6
N5	C11	C12	H112	125.2	241.2
H111	C11	C12	H112	250.5	122.6
H121	C12	C11	H122	250.5	237.7
N5	C11	H111	C12	117.9	245.2
N5	C11	H111	H112	238.9	122.7
C12	C11	H111	H112	121.1	237.4
H111	C11	C12	H121	265.7	336.2
H111	C11	C12	H122	15.1	98.5
N5	C11	H112	C12	242.2	114.9
N5	C11	H112	H111	121.1	237.4
C12	C11	H112	H111	238.9	122.6
H112	C11	C12	H121	15.1	213.6
H112	C11	C12	H122	124.6	335.9
H121	C12	C6	H61	326.7	358.9
H121	C12	C6	H62	76.1	121.3
C6	C12	H121	C11	120.9	115.4
C6	C12	H121	H122	240.5	237.7
H121	C12	C11	H111	265.7	336.2
H121	C12	C11	H112	15.1	213.6
C11	C12	H121	H122	119.5	122.3
H122	C12	C6	H61	217.2	236.5
H122	C12	C6	H62	326.7	358.9
C6	C12	H122	C11	239.1	244.6
C6	C12	H122	H121	119.6	122.3
H122	C12	C11	H111	15.1	98.5
H122	C12	C11	H112	124.6	335.9
C11	C12	H122	H121	240.5	237.7
H14	C14	C8	H8	0.0	0.3
C8	C14	H14	C9	180.0	179.9
H14	C14	C9	H9	0.0	0.1
N16	C15	N10	H10	308.2	5.9
N10	C15	N16	O17	180.6	180.2
C18	N16	C15	H16	180.0	180.1
C15	N16	C18	C19	168.3	185.0
C15	N16	C18	N20	348.5	4.7
O17	C15	N10	H10	128.8	186.0
N10	C15	O17	N16	179.3	179.8
O17	C15	N16	C18	170.5	355.0
O17	C15	N16	H16	350.5	175.0
C18	N16	C15	O17	170.5	355.0
C15	N16	C18	H16	180.0	179.9
C19	C18	N16	N20	179.8	180.3
N16	C18	C19	C21	180.4	180.0
N16	C18	C19	H19	0.4	359.9
N16	C18	N20	C22	179.7	179.8
H16	N16	C15	O17	350.5	175.0
C15	N16	H16	C18	180.0	180.1
H16	N16	C18	C19	348.3	5.1
H16	N16	C18	N20	168.5	184.8
C19	C18	N16	H16	348.3	5.1
N16	C18	C19	N20	180.2	179.7
C19	C18	N20	C22	359.9	359.4
C21	C19	C18	H19	180.0	180.1
C18	C19	C21	C23	359.9	359.9
C18	C19	C21	H21	179.9	179.9
N20	C18	N16	H16	168.5	184.8
N16	C18	N20	C19	179.8	180.3
N20	C18	C19	C21	0.2	0.3
N20	C18	C19	H19	180.2	180.3
C18	N20	C22	C23	359.9	0.6
C18	N20	C22	H22	180.0	180.3
C21	C19	C18	N20	0.2	0.3
C18	C19	C21	H19	180.0	179.9
C23	C21	C19	H21	180.0	180.0
C19	C21	C23	C22	359.9	0.1
C19	C21	C23	H23	179.9	180.0
H19	C19	C18	N20	180.2	180.3
C18	C19	H19	C21	180.0	180.1
H19	C19	C21	C23	179.9	180.0
H19	C19	C21	H21	359.9	0.0
C21	C23	C22	N20	0.2	359.7
C23	C22	N20	H22	180.0	180.2
N20	C22	C23	H23	180.2	179.8
C23	C21	C19	H19	179.9	180.0
C19	C21	C23	H21	180.0	180.0
N20	C22	C23	C21	0.2	359.7
C21	C23	C22	H22	180.2	179.9
C22	C23	C21	H23	180.0	180.1
H21	C21	C19	H19	359.9	0.0
C19	C21	H21	C23	180.0	180.0
H21	C21	C23	C22	179.9	180.1
H21	C21	C23	H23	359.9	359.9
N20	C22	C23	H22	180.0	179.8
C22	C23	C21	H21	179.9	180.1
C21	C23	C22	H23	180.0	179.9
N20	C22	H22	C23	180.0	180.2
H22	C22	C23	H23	0.1	0.0
H23	C23	C21	H21	359.9	359.9
C21	C23	H23	C22	180.0	180.1
H23	C23	C22	H22	0.1	0.0