PDB Chemical Component 1PS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1PS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C1 |
1.380 |
1.319 |
N1 |
C3 |
1.393 |
1.319 |
N1 |
C6 |
1.479 |
1.465 |
C1 |
C2 |
1.388 |
1.382 |
C1 |
H1 |
1.103 |
1.080 |
C2 |
C5 |
1.398 |
1.387 |
C2 |
H2 |
1.103 |
1.080 |
C3 |
C4 |
1.395 |
1.382 |
C3 |
H3 |
1.103 |
1.080 |
C4 |
C5 |
1.391 |
1.386 |
C4 |
H4 |
1.103 |
1.080 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
C7 |
1.504 |
1.530 |
C6 |
H61 |
1.114 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
C7 |
C8 |
1.499 |
1.530 |
C7 |
H71 |
1.115 |
1.090 |
C7 |
H72 |
1.116 |
1.090 |
C8 |
S1 |
1.752 |
1.814 |
C8 |
H81 |
1.115 |
1.090 |
C8 |
H82 |
1.115 |
1.089 |
S1 |
O1 |
1.471 |
1.455 |
S1 |
O2 |
1.457 |
1.455 |
S1 |
O3 |
1.455 |
1.455 |
Bond Angles for 1PS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
N1 |
C3 |
121.1 |
121.7 |
C1 |
N1 |
C6 |
120.5 |
119.1 |
N1 |
C1 |
C2 |
120.2 |
120.8 |
N1 |
C1 |
H1 |
119.6 |
119.6 |
C3 |
N1 |
C6 |
118.3 |
119.1 |
N1 |
C3 |
C4 |
119.2 |
120.7 |
N1 |
C3 |
H3 |
120.3 |
119.6 |
N1 |
C6 |
C7 |
110.9 |
109.5 |
N1 |
C6 |
H61 |
111.7 |
109.5 |
N1 |
C6 |
H62 |
111.7 |
109.5 |
C2 |
C1 |
H1 |
120.2 |
119.6 |
C1 |
C2 |
C5 |
119.0 |
119.2 |
C1 |
C2 |
H2 |
120.2 |
120.4 |
C5 |
C2 |
H2 |
120.9 |
120.4 |
C2 |
C5 |
C4 |
121.0 |
118.4 |
C2 |
C5 |
H5 |
119.7 |
120.8 |
C4 |
C3 |
H3 |
120.4 |
119.7 |
C3 |
C4 |
C5 |
119.5 |
119.2 |
C3 |
C4 |
H4 |
120.4 |
120.4 |
C5 |
C4 |
H4 |
120.2 |
120.4 |
C4 |
C5 |
H5 |
119.2 |
120.8 |
C7 |
C6 |
H61 |
111.7 |
109.5 |
C7 |
C6 |
H62 |
111.7 |
109.5 |
C6 |
C7 |
C8 |
109.7 |
109.5 |
C6 |
C7 |
H71 |
112.1 |
109.5 |
C6 |
C7 |
H72 |
112.1 |
109.5 |
H61 |
C6 |
H62 |
98.7 |
109.5 |
C8 |
C7 |
H71 |
112.2 |
109.5 |
C8 |
C7 |
H72 |
112.2 |
109.5 |
C7 |
C8 |
S1 |
114.5 |
109.5 |
C7 |
C8 |
H81 |
110.3 |
109.5 |
C7 |
C8 |
H82 |
110.3 |
109.5 |
H71 |
C7 |
H72 |
98.2 |
109.5 |
S1 |
C8 |
H81 |
110.4 |
109.4 |
S1 |
C8 |
H82 |
110.4 |
109.5 |
C8 |
S1 |
O1 |
106.3 |
109.3 |
C8 |
S1 |
O2 |
105.8 |
109.3 |
C8 |
S1 |
O3 |
106.0 |
109.3 |
H81 |
C8 |
H82 |
99.9 |
109.5 |
O1 |
S1 |
O2 |
112.9 |
109.6 |
O1 |
S1 |
O3 |
111.8 |
109.7 |
O2 |
S1 |
O3 |
113.4 |
109.6 |
Torsion Angles for 1PS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
N1 |
C1 |
C6 |
180.5 |
180.3 |
C1 |
N1 |
C3 |
C4 |
0.1 |
359.5 |
C1 |
N1 |
C3 |
H3 |
180.1 |
180.0 |
C1 |
N1 |
C6 |
C7 |
264.2 |
90.0 |
C1 |
N1 |
C6 |
H61 |
29.5 |
330.0 |
C1 |
N1 |
C6 |
H62 |
138.9 |
210.0 |
C2 |
C1 |
N1 |
H1 |
180.0 |
180.1 |
N1 |
C1 |
C2 |
C5 |
0.2 |
359.9 |
N1 |
C1 |
C2 |
H2 |
180.1 |
180.0 |
C1 |
N1 |
C3 |
C6 |
179.5 |
179.7 |
C3 |
N1 |
C1 |
C2 |
359.8 |
0.3 |
C3 |
N1 |
C1 |
H1 |
179.7 |
180.2 |
C3 |
N1 |
C6 |
C7 |
83.7 |
269.7 |
C3 |
N1 |
C6 |
H61 |
209.0 |
149.8 |
C3 |
N1 |
C6 |
H62 |
318.4 |
29.7 |
C4 |
C3 |
N1 |
H3 |
180.0 |
179.5 |
N1 |
C3 |
C4 |
C5 |
0.2 |
0.5 |
N1 |
C3 |
C4 |
H4 |
180.2 |
180.3 |
C1 |
N1 |
C6 |
C3 |
180.5 |
180.3 |
C6 |
N1 |
C1 |
C2 |
179.2 |
180.0 |
C6 |
N1 |
C1 |
H1 |
359.2 |
360.0 |
C6 |
N1 |
C3 |
C4 |
180.6 |
179.8 |
C6 |
N1 |
C3 |
H3 |
0.6 |
0.3 |
C7 |
C6 |
N1 |
H61 |
234.7 |
120.0 |
C7 |
C6 |
N1 |
H62 |
125.3 |
240.0 |
N1 |
C6 |
C7 |
C8 |
64.8 |
180.0 |
N1 |
C6 |
C7 |
H71 |
190.1 |
60.0 |
N1 |
C6 |
C7 |
H72 |
299.5 |
300.0 |
H61 |
C6 |
N1 |
H62 |
250.6 |
120.1 |
C2 |
C1 |
N1 |
C3 |
359.8 |
0.3 |
C2 |
C1 |
N1 |
C6 |
179.2 |
180.0 |
N1 |
C1 |
C2 |
H1 |
180.0 |
179.9 |
C5 |
C2 |
C1 |
H2 |
180.0 |
179.9 |
C1 |
C2 |
C5 |
C4 |
0.1 |
0.1 |
C1 |
C2 |
C5 |
H5 |
180.1 |
180.0 |
H1 |
C1 |
N1 |
C3 |
179.7 |
180.2 |
H1 |
C1 |
N1 |
C6 |
359.2 |
360.0 |
N1 |
C1 |
H1 |
C2 |
180.0 |
180.1 |
H1 |
C1 |
C2 |
C5 |
180.2 |
180.0 |
H1 |
C1 |
C2 |
H2 |
0.2 |
0.1 |
C5 |
C2 |
C1 |
H1 |
180.2 |
180.0 |
C1 |
C2 |
C5 |
H2 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
C2 |
359.7 |
359.7 |
C2 |
C5 |
C4 |
H4 |
179.7 |
179.9 |
C4 |
C5 |
C2 |
H5 |
180.1 |
180.1 |
H2 |
C2 |
C1 |
H1 |
0.2 |
0.1 |
C1 |
C2 |
H2 |
C5 |
180.0 |
179.9 |
H2 |
C2 |
C5 |
C4 |
180.1 |
180.0 |
H2 |
C2 |
C5 |
H5 |
0.1 |
359.9 |
C4 |
C3 |
N1 |
C6 |
180.6 |
179.8 |
N1 |
C3 |
C4 |
H3 |
180.0 |
180.5 |
C2 |
C5 |
C4 |
C3 |
359.7 |
359.7 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.2 |
C3 |
C4 |
C5 |
H5 |
179.8 |
179.8 |
H3 |
C3 |
N1 |
C6 |
0.6 |
0.3 |
N1 |
C3 |
H3 |
C4 |
180.0 |
179.5 |
H3 |
C3 |
C4 |
C5 |
180.2 |
180.0 |
H3 |
C3 |
C4 |
H4 |
0.2 |
359.8 |
C4 |
C5 |
C2 |
H2 |
180.1 |
180.0 |
C2 |
C5 |
C4 |
H5 |
179.9 |
179.9 |
C5 |
C4 |
C3 |
H3 |
180.2 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.8 |
H4 |
C4 |
C3 |
H3 |
0.2 |
359.8 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.2 |
H4 |
C4 |
C5 |
H5 |
359.8 |
0.1 |
H5 |
C5 |
C2 |
H2 |
0.1 |
359.9 |
C2 |
C5 |
H5 |
C4 |
180.1 |
180.1 |
H5 |
C5 |
C4 |
H4 |
359.8 |
0.1 |
N1 |
C6 |
C7 |
H61 |
125.3 |
240.0 |
N1 |
C6 |
C7 |
H62 |
234.8 |
120.0 |
H61 |
C6 |
C7 |
H62 |
109.5 |
240.0 |
C8 |
C7 |
C6 |
H71 |
234.7 |
120.0 |
C8 |
C7 |
C6 |
H72 |
125.3 |
240.0 |
C6 |
C7 |
C8 |
S1 |
185.0 |
180.0 |
C6 |
C7 |
C8 |
H81 |
310.3 |
60.0 |
C6 |
C7 |
C8 |
H82 |
59.8 |
300.0 |
H71 |
C7 |
C6 |
H72 |
250.6 |
120.0 |
N1 |
C6 |
H61 |
C7 |
235.1 |
120.0 |
N1 |
C6 |
H61 |
H62 |
117.5 |
240.0 |
C7 |
C6 |
H61 |
H62 |
242.4 |
120.0 |
H61 |
C6 |
C7 |
C8 |
299.5 |
300.0 |
H61 |
C6 |
C7 |
H71 |
64.8 |
180.0 |
H61 |
C6 |
C7 |
H72 |
174.2 |
60.0 |
N1 |
C6 |
H62 |
C7 |
124.8 |
240.0 |
N1 |
C6 |
H62 |
H61 |
242.4 |
120.0 |
C7 |
C6 |
H62 |
H61 |
117.6 |
240.0 |
H62 |
C6 |
C7 |
C8 |
190.1 |
60.0 |
H62 |
C6 |
C7 |
H71 |
315.4 |
300.0 |
H62 |
C6 |
C7 |
H72 |
64.8 |
180.0 |
C8 |
C7 |
C6 |
H61 |
299.5 |
300.0 |
C8 |
C7 |
C6 |
H62 |
190.1 |
60.0 |
C6 |
C7 |
C8 |
H71 |
125.3 |
240.0 |
C6 |
C7 |
C8 |
H72 |
234.7 |
120.0 |
H71 |
C7 |
C8 |
H72 |
109.5 |
240.0 |
S1 |
C8 |
C7 |
H81 |
234.8 |
120.0 |
S1 |
C8 |
C7 |
H82 |
125.3 |
240.0 |
C7 |
C8 |
S1 |
O1 |
307.4 |
180.0 |
C7 |
C8 |
S1 |
O2 |
187.1 |
60.0 |
C7 |
C8 |
S1 |
O3 |
66.4 |
300.0 |
H81 |
C8 |
C7 |
H82 |
250.5 |
120.0 |
H71 |
C7 |
C6 |
H61 |
64.8 |
180.0 |
H71 |
C7 |
C6 |
H62 |
315.4 |
300.0 |
C6 |
C7 |
H71 |
C8 |
236.1 |
120.0 |
C6 |
C7 |
H71 |
H72 |
118.0 |
240.0 |
C8 |
C7 |
H71 |
H72 |
241.9 |
120.0 |
H71 |
C7 |
C8 |
S1 |
59.8 |
300.0 |
H71 |
C7 |
C8 |
H81 |
185.0 |
180.0 |
H71 |
C7 |
C8 |
H82 |
294.5 |
60.0 |
H72 |
C7 |
C6 |
H61 |
174.2 |
60.0 |
H72 |
C7 |
C6 |
H62 |
64.8 |
180.0 |
C6 |
C7 |
H72 |
C8 |
123.9 |
240.0 |
C6 |
C7 |
H72 |
H71 |
242.0 |
120.0 |
C8 |
C7 |
H72 |
H71 |
118.1 |
240.0 |
H72 |
C7 |
C8 |
S1 |
310.3 |
60.0 |
H72 |
C7 |
C8 |
H81 |
75.5 |
300.0 |
H72 |
C7 |
C8 |
H82 |
185.0 |
180.0 |
S1 |
C8 |
C7 |
H71 |
59.8 |
300.0 |
S1 |
C8 |
C7 |
H72 |
310.3 |
60.0 |
C7 |
C8 |
S1 |
H81 |
125.2 |
240.0 |
C7 |
C8 |
S1 |
H82 |
234.8 |
120.0 |
H81 |
C8 |
S1 |
H82 |
109.5 |
240.0 |
O1 |
S1 |
C8 |
O2 |
120.2 |
120.0 |
O1 |
S1 |
C8 |
O3 |
240.9 |
240.0 |
O2 |
S1 |
C8 |
O3 |
120.7 |
120.0 |
H81 |
C8 |
C7 |
H71 |
185.0 |
180.0 |
H81 |
C8 |
C7 |
H72 |
75.5 |
300.0 |
C7 |
C8 |
H81 |
S1 |
232.5 |
120.0 |
C7 |
C8 |
H81 |
H82 |
116.2 |
240.0 |
S1 |
C8 |
H81 |
H82 |
243.7 |
120.0 |
H81 |
C8 |
S1 |
O1 |
182.1 |
300.0 |
H81 |
C8 |
S1 |
O2 |
61.9 |
180.0 |
H81 |
C8 |
S1 |
O3 |
301.2 |
60.0 |
H82 |
C8 |
C7 |
H71 |
294.5 |
60.0 |
H82 |
C8 |
C7 |
H72 |
185.0 |
180.0 |
C7 |
C8 |
H82 |
S1 |
127.6 |
240.0 |
C7 |
C8 |
H82 |
H81 |
243.8 |
120.0 |
S1 |
C8 |
H82 |
H81 |
116.3 |
240.0 |
H82 |
C8 |
S1 |
O1 |
72.6 |
60.0 |
H82 |
C8 |
S1 |
O2 |
312.4 |
300.0 |
H82 |
C8 |
S1 |
O3 |
191.7 |
180.0 |
O1 |
S1 |
C8 |
H81 |
182.1 |
300.0 |
O1 |
S1 |
C8 |
H82 |
72.6 |
60.0 |
C8 |
S1 |
O1 |
O2 |
244.5 |
240.2 |
C8 |
S1 |
O1 |
O3 |
115.3 |
119.8 |
O2 |
S1 |
O1 |
O3 |
230.8 |
239.6 |
O2 |
S1 |
C8 |
H81 |
61.9 |
180.0 |
O2 |
S1 |
C8 |
H82 |
312.4 |
300.0 |
C8 |
S1 |
O2 |
O1 |
115.8 |
119.8 |
C8 |
S1 |
O2 |
O3 |
244.2 |
240.2 |
O1 |
S1 |
O2 |
O3 |
128.4 |
120.4 |
O3 |
S1 |
C8 |
H81 |
301.2 |
60.0 |
O3 |
S1 |
C8 |
H82 |
191.7 |
180.0 |
C8 |
S1 |
O3 |
O1 |
244.6 |
240.2 |
C8 |
S1 |
O3 |
O2 |
115.6 |
119.8 |
O1 |
S1 |
O3 |
O2 |
231.0 |
239.6 |