PDB Chemical Component 1PB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1PB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CP |
CO |
1.394 |
1.381 |
CP |
CQ |
1.394 |
1.382 |
CP |
HP |
1.061 |
1.081 |
CA |
CB |
1.392 |
1.324 |
CA |
CG |
1.514 |
1.478 |
CA |
HA |
1.061 |
1.081 |
CB |
CC |
1.524 |
1.506 |
CB |
HB |
1.062 |
1.081 |
CC |
CD |
1.390 |
1.529 |
CC |
HCC1 |
1.100 |
1.089 |
CC |
HCC2 |
1.099 |
1.090 |
CD |
C1 |
1.517 |
1.506 |
CD |
HDC1 |
1.100 |
1.090 |
CD |
HDC2 |
1.100 |
1.090 |
CG |
CH |
1.397 |
1.395 |
CG |
CL |
1.394 |
1.394 |
CH |
CI |
1.396 |
1.380 |
CH |
HH |
1.061 |
1.080 |
CI |
CJ |
1.392 |
1.382 |
CI |
HI |
1.061 |
1.079 |
C1 |
CN |
1.396 |
1.382 |
C1 |
CR |
1.399 |
1.382 |
CJ |
CK |
1.396 |
1.384 |
CJ |
HJ |
1.062 |
1.080 |
CK |
CL |
1.394 |
1.380 |
CK |
HK |
1.062 |
1.079 |
CL |
HL |
1.062 |
1.080 |
CN |
CO |
1.394 |
1.382 |
CN |
HN |
1.061 |
1.080 |
CO |
HO |
1.062 |
1.080 |
CQ |
CR |
1.397 |
1.382 |
CQ |
HQ |
1.062 |
1.080 |
CR |
HR |
1.061 |
1.080 |
Bond Angles for 1PB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CO |
CP |
CQ |
119.9 |
120.0 |
CO |
CP |
HP |
120.1 |
120.0 |
CP |
CO |
CN |
120.2 |
120.0 |
CP |
CO |
HO |
119.9 |
120.0 |
CQ |
CP |
HP |
120.1 |
120.0 |
CP |
CQ |
CR |
120.2 |
120.0 |
CP |
CQ |
HQ |
119.9 |
120.0 |
CB |
CA |
CG |
121.1 |
120.1 |
CB |
CA |
HA |
119.5 |
119.9 |
CA |
CB |
CC |
119.4 |
120.0 |
CA |
CB |
HB |
120.3 |
119.9 |
CG |
CA |
HA |
119.5 |
120.0 |
CA |
CG |
CH |
120.9 |
120.2 |
CA |
CG |
CL |
119.4 |
120.1 |
CC |
CB |
HB |
120.3 |
120.0 |
CB |
CC |
CD |
119.7 |
109.5 |
CB |
CC |
HCC1 |
106.9 |
109.5 |
CB |
CC |
HCC2 |
103.5 |
109.5 |
CD |
CC |
HCC1 |
106.8 |
109.5 |
CD |
CC |
HCC2 |
103.5 |
109.4 |
CC |
CD |
C1 |
121.9 |
109.5 |
CC |
CD |
HDC1 |
106.3 |
109.4 |
CC |
CD |
HDC2 |
102.2 |
109.5 |
HCC1 |
CC |
HCC2 |
117.1 |
109.5 |
C1 |
CD |
HDC1 |
106.3 |
109.5 |
C1 |
CD |
HDC2 |
102.2 |
109.5 |
CD |
C1 |
CN |
119.0 |
120.0 |
CD |
C1 |
CR |
121.2 |
120.0 |
HDC1 |
CD |
HDC2 |
118.9 |
109.4 |
CH |
CG |
CL |
119.8 |
119.7 |
CG |
CH |
CI |
120.4 |
119.9 |
CG |
CH |
HH |
119.8 |
120.1 |
CG |
CL |
CK |
119.8 |
119.9 |
CG |
CL |
HL |
120.1 |
120.1 |
CI |
CH |
HH |
119.8 |
120.1 |
CH |
CI |
CJ |
119.8 |
120.1 |
CH |
CI |
HI |
120.1 |
119.9 |
CJ |
CI |
HI |
120.1 |
120.0 |
CI |
CJ |
CK |
119.8 |
120.3 |
CI |
CJ |
HJ |
120.1 |
119.8 |
CN |
C1 |
CR |
119.7 |
120.0 |
C1 |
CN |
CO |
120.1 |
120.0 |
C1 |
CN |
HN |
119.9 |
120.0 |
C1 |
CR |
CQ |
119.9 |
120.0 |
C1 |
CR |
HR |
120.1 |
120.0 |
CK |
CJ |
HJ |
120.1 |
119.8 |
CJ |
CK |
CL |
120.5 |
120.1 |
CJ |
CK |
HK |
119.7 |
120.0 |
CL |
CK |
HK |
119.8 |
119.9 |
CK |
CL |
HL |
120.1 |
120.1 |
CO |
CN |
HN |
119.9 |
120.0 |
CN |
CO |
HO |
119.9 |
120.0 |
CR |
CQ |
HQ |
119.9 |
120.0 |
CQ |
CR |
HR |
120.0 |
120.0 |
Torsion Angles for 1PB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CQ |
CP |
CO |
HP |
180.0 |
179.9 |
CO |
CP |
CQ |
CR |
359.7 |
0.1 |
CO |
CP |
CQ |
HQ |
179.7 |
180.0 |
C1 |
CN |
CO |
CP |
359.7 |
0.5 |
CP |
CO |
CN |
HN |
179.8 |
180.0 |
CN |
CO |
CP |
HO |
180.0 |
179.8 |
CO |
CP |
CQ |
HP |
180.0 |
180.1 |
CQ |
CP |
CO |
CN |
0.3 |
359.7 |
CQ |
CP |
CO |
HO |
180.3 |
179.9 |
C1 |
CR |
CQ |
CP |
0.3 |
359.9 |
CR |
CQ |
CP |
HQ |
180.0 |
180.0 |
CP |
CQ |
CR |
HR |
180.3 |
180.0 |
CO |
CP |
HP |
CQ |
180.0 |
179.9 |
HP |
CP |
CO |
CN |
180.3 |
179.8 |
HP |
CP |
CO |
HO |
0.3 |
0.0 |
HP |
CP |
CQ |
CR |
179.7 |
180.0 |
HP |
CP |
CQ |
HQ |
359.7 |
359.9 |
CG |
CA |
CB |
HA |
180.0 |
180.0 |
CB |
CA |
CG |
CH |
317.7 |
180.0 |
CB |
CA |
CG |
CL |
138.2 |
359.7 |
CC |
CB |
CA |
HB |
180.0 |
179.9 |
CA |
CB |
CC |
CD |
190.0 |
120.1 |
CA |
CB |
CC |
HCC1 |
311.5 |
0.1 |
CA |
CB |
CC |
HCC2 |
75.7 |
240.0 |
CB |
CA |
CG |
HA |
180.0 |
180.0 |
CG |
CA |
CB |
CC |
180.3 |
180.0 |
CG |
CA |
CB |
HB |
0.3 |
0.1 |
CH |
CG |
CA |
CL |
179.5 |
180.3 |
CA |
CG |
CH |
CI |
180.2 |
180.0 |
CA |
CG |
CH |
HH |
0.2 |
360.0 |
CA |
CG |
CL |
CK |
180.0 |
179.7 |
CA |
CG |
CL |
HL |
360.0 |
0.3 |
CB |
CA |
HA |
CG |
180.0 |
180.0 |
HA |
CA |
CB |
CC |
0.3 |
359.9 |
HA |
CA |
CB |
HB |
180.3 |
180.1 |
HA |
CA |
CG |
CH |
137.7 |
0.0 |
HA |
CA |
CG |
CL |
318.2 |
179.7 |
CC |
CB |
CA |
CG |
180.3 |
180.0 |
CC |
CB |
CA |
HA |
0.3 |
359.9 |
CA |
CB |
CC |
HB |
180.0 |
180.1 |
CD |
CC |
CB |
HCC1 |
238.6 |
120.0 |
CD |
CC |
CB |
HCC2 |
114.3 |
240.1 |
CB |
CC |
CD |
C1 |
151.8 |
180.0 |
CB |
CC |
CD |
HDC1 |
273.6 |
300.1 |
CB |
CC |
CD |
HDC2 |
38.9 |
59.9 |
HCC1 |
CC |
CB |
HCC2 |
235.8 |
120.0 |
HB |
CB |
CA |
CG |
0.3 |
0.1 |
HB |
CB |
CA |
HA |
180.3 |
180.1 |
CA |
CB |
HB |
CC |
180.0 |
179.9 |
HB |
CB |
CC |
CD |
10.0 |
300.0 |
HB |
CB |
CC |
HCC1 |
131.5 |
179.9 |
HB |
CB |
CC |
HCC2 |
255.7 |
59.9 |
CD |
CC |
CB |
HB |
10.0 |
300.0 |
CB |
CC |
CD |
HCC1 |
121.5 |
240.0 |
CB |
CC |
CD |
HCC2 |
245.7 |
120.0 |
HCC1 |
CC |
CD |
HCC2 |
124.2 |
240.0 |
C1 |
CD |
CC |
HDC1 |
238.3 |
239.9 |
C1 |
CD |
CC |
HDC2 |
112.9 |
120.1 |
CC |
CD |
C1 |
CN |
166.7 |
269.6 |
CC |
CD |
C1 |
CR |
346.5 |
90.0 |
HDC1 |
CD |
CC |
HDC2 |
234.6 |
240.1 |
HCC1 |
CC |
CB |
HB |
131.5 |
179.9 |
CB |
CC |
HCC1 |
CD |
230.7 |
120.0 |
CB |
CC |
HCC1 |
HCC2 |
115.4 |
240.0 |
CD |
CC |
HCC1 |
HCC2 |
244.6 |
120.0 |
HCC1 |
CC |
CD |
C1 |
30.4 |
300.0 |
HCC1 |
CC |
CD |
HDC1 |
152.1 |
60.1 |
HCC1 |
CC |
CD |
HDC2 |
277.5 |
180.0 |
HCC2 |
CC |
CB |
HB |
255.7 |
59.9 |
CB |
CC |
HCC2 |
CD |
125.5 |
240.0 |
CB |
CC |
HCC2 |
HCC1 |
242.7 |
120.0 |
CD |
CC |
HCC2 |
HCC1 |
117.2 |
240.0 |
HCC2 |
CC |
CD |
C1 |
266.2 |
60.0 |
HCC2 |
CC |
CD |
HDC1 |
27.9 |
180.1 |
HCC2 |
CC |
CD |
HDC2 |
153.3 |
300.0 |
C1 |
CD |
CC |
HCC1 |
30.4 |
300.0 |
C1 |
CD |
CC |
HCC2 |
266.2 |
60.0 |
CC |
CD |
C1 |
HDC1 |
121.7 |
120.0 |
CC |
CD |
C1 |
HDC2 |
247.1 |
239.9 |
HDC1 |
CD |
C1 |
HDC2 |
125.4 |
119.9 |
CN |
C1 |
CD |
CR |
180.2 |
179.6 |
CD |
C1 |
CN |
CO |
180.0 |
179.8 |
CD |
C1 |
CN |
HN |
0.0 |
0.3 |
CD |
C1 |
CR |
CQ |
180.0 |
180.0 |
CD |
C1 |
CR |
HR |
360.0 |
359.9 |
HDC1 |
CD |
CC |
HCC1 |
152.1 |
60.1 |
HDC1 |
CD |
CC |
HCC2 |
27.9 |
180.1 |
CC |
CD |
HDC1 |
C1 |
228.8 |
240.0 |
CC |
CD |
HDC1 |
HDC2 |
114.4 |
120.0 |
C1 |
CD |
HDC1 |
HDC2 |
245.6 |
240.0 |
HDC1 |
CD |
C1 |
CN |
44.9 |
149.6 |
HDC1 |
CD |
C1 |
CR |
224.8 |
330.0 |
HDC2 |
CD |
CC |
HCC1 |
277.5 |
180.0 |
HDC2 |
CD |
CC |
HCC2 |
153.3 |
300.0 |
CC |
CD |
HDC2 |
C1 |
126.8 |
120.1 |
CC |
CD |
HDC2 |
HDC1 |
243.4 |
240.1 |
C1 |
CD |
HDC2 |
HDC1 |
116.6 |
120.0 |
HDC2 |
CD |
C1 |
CN |
279.6 |
29.7 |
HDC2 |
CD |
C1 |
CR |
99.4 |
210.1 |
CH |
CG |
CA |
HA |
137.7 |
0.0 |
CA |
CG |
CH |
CL |
180.5 |
179.7 |
CH |
CG |
CL |
CK |
0.4 |
359.4 |
CH |
CG |
CL |
HL |
180.5 |
180.0 |
CI |
CH |
CG |
HH |
180.0 |
180.0 |
CG |
CH |
CI |
CJ |
0.0 |
360.0 |
CG |
CH |
CI |
HI |
180.0 |
180.0 |
CL |
CG |
CA |
HA |
318.2 |
179.7 |
CA |
CG |
CL |
CH |
179.5 |
180.3 |
CL |
CG |
CH |
CI |
359.7 |
0.3 |
CL |
CG |
CH |
HH |
179.7 |
180.3 |
CJ |
CK |
CL |
CG |
359.7 |
0.6 |
CG |
CL |
CK |
HK |
179.7 |
180.4 |
CK |
CL |
CG |
HL |
180.0 |
179.4 |
CI |
CH |
CG |
CL |
359.7 |
0.3 |
CG |
CH |
CI |
HH |
180.0 |
180.0 |
CJ |
CI |
CH |
HI |
180.0 |
180.0 |
CH |
CI |
CJ |
CK |
0.2 |
0.0 |
CH |
CI |
CJ |
HJ |
180.2 |
180.0 |
HH |
CH |
CG |
CL |
179.7 |
180.3 |
CG |
CH |
HH |
CI |
180.0 |
180.0 |
HH |
CH |
CI |
CJ |
180.0 |
180.0 |
HH |
CH |
CI |
HI |
0.0 |
0.0 |
CJ |
CI |
CH |
HH |
180.0 |
180.0 |
CH |
CI |
CJ |
HI |
180.0 |
180.0 |
CK |
CJ |
CI |
HJ |
180.0 |
180.1 |
CI |
CJ |
CK |
CL |
360.0 |
359.7 |
CI |
CJ |
CK |
HK |
180.0 |
179.9 |
HI |
CI |
CH |
HH |
0.0 |
0.0 |
CH |
CI |
HI |
CJ |
180.0 |
180.0 |
HI |
CI |
CJ |
CK |
180.2 |
180.0 |
HI |
CI |
CJ |
HJ |
0.2 |
360.0 |
CP |
CO |
CN |
C1 |
359.7 |
0.5 |
CN |
C1 |
CD |
HDC1 |
44.9 |
149.6 |
CN |
C1 |
CD |
HDC2 |
279.6 |
29.7 |
CD |
C1 |
CN |
CR |
179.8 |
180.4 |
CN |
C1 |
CR |
CQ |
359.8 |
0.4 |
CN |
C1 |
CR |
HR |
179.8 |
180.3 |
CO |
CN |
C1 |
HN |
180.0 |
179.5 |
C1 |
CN |
CO |
HO |
179.8 |
180.3 |
CP |
CQ |
CR |
C1 |
0.3 |
359.9 |
CR |
C1 |
CD |
HDC1 |
224.8 |
330.0 |
CR |
C1 |
CD |
HDC2 |
99.4 |
210.1 |
CD |
C1 |
CR |
CN |
180.2 |
179.6 |
CR |
C1 |
CN |
CO |
0.2 |
359.4 |
CR |
C1 |
CN |
HN |
180.2 |
179.9 |
C1 |
CR |
CQ |
HQ |
180.2 |
179.9 |
CQ |
CR |
C1 |
HR |
180.0 |
180.1 |
CG |
CL |
CK |
CJ |
359.7 |
0.6 |
CK |
CJ |
CI |
HI |
180.2 |
180.0 |
CI |
CJ |
CK |
HJ |
180.0 |
179.9 |
CL |
CK |
CJ |
HK |
180.0 |
179.8 |
CJ |
CK |
CL |
HL |
179.7 |
180.0 |
HJ |
CJ |
CI |
HI |
0.2 |
360.0 |
CI |
CJ |
HJ |
CK |
180.0 |
180.1 |
HJ |
CJ |
CK |
CL |
179.9 |
179.8 |
HJ |
CJ |
CK |
HK |
359.9 |
360.0 |
CG |
CL |
CK |
HL |
180.0 |
180.6 |
CL |
CK |
CJ |
HJ |
179.9 |
179.8 |
CJ |
CK |
CL |
HK |
180.0 |
180.2 |
HK |
CK |
CJ |
HJ |
359.9 |
360.0 |
CJ |
CK |
HK |
CL |
180.0 |
179.8 |
HK |
CK |
CL |
HL |
359.7 |
359.8 |
CG |
CL |
HL |
CK |
180.0 |
179.4 |
HL |
CL |
CK |
HK |
359.7 |
359.8 |
CN |
CO |
CP |
CQ |
0.3 |
359.7 |
CN |
CO |
CP |
HP |
180.3 |
179.8 |
CP |
CO |
CN |
HO |
180.0 |
180.2 |
CO |
CN |
C1 |
CR |
0.2 |
359.4 |
C1 |
CN |
CO |
HN |
180.0 |
180.5 |
HN |
CN |
C1 |
CR |
180.2 |
179.9 |
C1 |
CN |
HN |
CO |
180.0 |
179.5 |
HN |
CN |
CO |
HO |
359.8 |
359.8 |
HO |
CO |
CP |
CQ |
180.3 |
179.9 |
HO |
CO |
CP |
HP |
0.3 |
0.0 |
CP |
CO |
HO |
CN |
180.0 |
179.8 |
HO |
CO |
CN |
HN |
359.8 |
359.8 |
CR |
CQ |
CP |
HP |
179.7 |
180.0 |
CP |
CQ |
CR |
HQ |
180.0 |
180.0 |
C1 |
CR |
CQ |
HR |
180.0 |
179.9 |
HQ |
CQ |
CP |
HP |
359.7 |
359.9 |
CP |
CQ |
HQ |
CR |
180.0 |
180.0 |
HQ |
CQ |
CR |
HR |
0.3 |
0.0 |
C1 |
CR |
HR |
CQ |
180.0 |
180.1 |
HR |
CR |
CQ |
HQ |
0.3 |
0.0 |