Atom Nomenclature for 1N6

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 1N6

Atom Name (V3) Atom Name (V2)
FAC FAC
CBD CBD
FAD FAD
FAE FAE
CAV CAV
CAK CAK
CAI CAI
CAF CAF
CAH CAH
CAU CAU
NAR NAR
C6 C6
N1 N1
C5 C5
CAY CAY
OAB OAB
NAT NAT
CAG CAG
CAJ CAJ
C4 C4
N3 N3
C2 C2
NAS NAS
CBC CBC
CAN CAN
CAL CAL
CBB CBB
NAA NAA
CAM CAM
CAO CAO
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23