PDB Chemical Component 1M7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1M7
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O16 |
C12 |
1.236 |
1.213 |
| C24 |
C8 |
1.549 |
1.529 |
| C12 |
N13 |
1.346 |
1.351 |
| C12 |
C10 |
1.538 |
1.512 |
| C17 |
N13 |
1.468 |
1.465 |
| C9 |
C8 |
1.547 |
1.535 |
| C9 |
C10 |
1.549 |
1.523 |
| C7 |
C8 |
1.551 |
1.526 |
| C7 |
C4 |
1.534 |
1.506 |
| C8 |
C25 |
1.554 |
1.531 |
| N13 |
C14 |
1.364 |
1.374 |
| C10 |
C5 |
1.533 |
1.503 |
| C10 |
N15 |
1.465 |
1.469 |
| C4 |
C3 |
1.423 |
1.390 |
| C4 |
C5 |
1.422 |
1.380 |
| C3 |
C2 |
1.420 |
1.378 |
| C5 |
C6 |
1.420 |
1.387 |
| C2 |
C1 |
1.424 |
1.393 |
| C6 |
C1 |
1.425 |
1.390 |
| C19 |
N20 |
1.344 |
1.322 |
| C19 |
C11 |
1.424 |
1.397 |
| C14 |
N15 |
1.290 |
1.298 |
| C14 |
N18 |
1.377 |
1.374 |
| C1 |
C11 |
1.423 |
1.485 |
| N20 |
C21 |
1.347 |
1.318 |
| C11 |
C23 |
1.419 |
1.396 |
| C21 |
N22 |
1.343 |
1.319 |
| C23 |
N22 |
1.342 |
1.322 |
| C2 |
H1 |
1.080 |
1.080 |
| C3 |
H2 |
1.080 |
1.080 |
| C6 |
H3 |
1.080 |
1.080 |
| C7 |
H4 |
1.100 |
1.090 |
| C7 |
H5 |
1.100 |
1.090 |
| C9 |
H6 |
1.100 |
1.090 |
| C9 |
H7 |
1.100 |
1.091 |
| C17 |
H8 |
1.100 |
1.090 |
| C17 |
H9 |
1.101 |
1.091 |
| C17 |
H10 |
1.100 |
1.090 |
| N18 |
H11 |
1.000 |
0.970 |
| N18 |
H12 |
1.000 |
0.970 |
| C19 |
H13 |
1.080 |
1.080 |
| C21 |
H14 |
1.080 |
1.080 |
| C23 |
H15 |
1.080 |
1.080 |
| C24 |
H16 |
1.100 |
1.090 |
| C24 |
H17 |
1.100 |
1.091 |
| C24 |
H18 |
1.100 |
1.090 |
| C25 |
H19 |
1.100 |
1.090 |
| C25 |
H20 |
1.100 |
1.090 |
| C25 |
H21 |
1.100 |
1.090 |
Bond Angles for 1M7
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C24 |
C8 |
C25 |
107.8 |
109.7 |
| C12 |
N13 |
C14 |
107.6 |
110.6 |
| C12 |
C10 |
N15 |
100.3 |
104.3 |
| C9 |
C8 |
C25 |
110.8 |
109.6 |
| C9 |
C10 |
N15 |
110.3 |
110.4 |
| C10 |
C9 |
H6 |
108.6 |
109.7 |
| C10 |
C9 |
H7 |
108.6 |
109.7 |
| C7 |
C8 |
C25 |
110.8 |
109.7 |
| C8 |
C7 |
H4 |
108.1 |
109.3 |
| C8 |
C7 |
H5 |
108.1 |
109.2 |
| C8 |
C25 |
H19 |
109.5 |
109.4 |
| C8 |
C25 |
H20 |
109.4 |
109.5 |
| C8 |
C25 |
H21 |
109.5 |
109.4 |
| N13 |
C14 |
N15 |
114.4 |
112.8 |
| N13 |
C14 |
N18 |
118.8 |
123.6 |
| C10 |
N15 |
C14 |
109.4 |
107.4 |
| C4 |
C3 |
H2 |
119.5 |
119.7 |
| C4 |
C5 |
C6 |
119.7 |
119.8 |
| C3 |
C2 |
H1 |
120.0 |
120.2 |
| C5 |
C6 |
H3 |
119.3 |
119.8 |
| C2 |
C1 |
C11 |
122.2 |
120.2 |
| C6 |
C1 |
C11 |
119.2 |
120.2 |
| C19 |
N20 |
C21 |
117.3 |
120.9 |
| N20 |
C19 |
H13 |
119.6 |
120.5 |
| C19 |
C11 |
C23 |
116.7 |
118.2 |
| N15 |
C14 |
N18 |
126.8 |
123.6 |
| C14 |
N18 |
H11 |
120.0 |
120.1 |
| C14 |
N18 |
H12 |
120.0 |
120.0 |
| C1 |
C11 |
C23 |
121.7 |
121.0 |
| N20 |
C21 |
N22 |
126.6 |
122.0 |
| N20 |
C21 |
H14 |
116.7 |
119.0 |
| C11 |
C23 |
N22 |
121.6 |
119.0 |
| C11 |
C23 |
H15 |
119.2 |
120.5 |
| N22 |
C21 |
H14 |
116.7 |
119.0 |
| H4 |
C7 |
H5 |
109.5 |
109.2 |
| H6 |
C9 |
H7 |
109.4 |
109.7 |
| H8 |
C17 |
H9 |
109.5 |
109.5 |
| H8 |
C17 |
H10 |
109.5 |
109.5 |
| H9 |
C17 |
H10 |
109.4 |
109.4 |
| H11 |
N18 |
H12 |
120.0 |
120.0 |
| H16 |
C24 |
H17 |
109.5 |
109.5 |
| H16 |
C24 |
H18 |
109.4 |
109.5 |
| H17 |
C24 |
H18 |
109.5 |
109.5 |
| H19 |
C25 |
H20 |
109.5 |
109.5 |
| H19 |
C25 |
H21 |
109.5 |
109.5 |
| H20 |
C25 |
H21 |
109.5 |
109.5 |
Torsion Angles for 1M7
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
C8 |
C24 |
C25 |
240.3 |
239.5 |
| C7 |
C8 |
C24 |
C25 |
121.2 |
120.5 |
| C24 |
C8 |
C7 |
H4 |
289.7 |
51.0 |
| C24 |
C8 |
C7 |
H5 |
48.0 |
291.7 |
| C24 |
C8 |
C25 |
H19 |
180.0 |
180.4 |
| C24 |
C8 |
C25 |
H20 |
300.0 |
300.5 |
| C24 |
C8 |
C25 |
H21 |
60.0 |
60.4 |
| N13 |
C12 |
C10 |
N15 |
359.9 |
360.0 |
| C12 |
N13 |
C14 |
N15 |
359.4 |
0.0 |
| C12 |
N13 |
C14 |
N18 |
179.6 |
180.0 |
| C9 |
C10 |
C12 |
N15 |
115.7 |
118.5 |
| C12 |
C10 |
C9 |
H6 |
35.0 |
52.9 |
| C12 |
C10 |
C9 |
H7 |
276.1 |
292.4 |
| C12 |
C10 |
N15 |
C14 |
359.8 |
0.0 |
| C17 |
N13 |
C14 |
N18 |
359.9 |
0.0 |
| C24 |
C8 |
C9 |
C25 |
117.7 |
120.5 |
| C7 |
C8 |
C9 |
C25 |
237.7 |
240.3 |
| C9 |
C8 |
C7 |
H4 |
171.4 |
291.2 |
| C9 |
C8 |
C7 |
H5 |
289.7 |
171.8 |
| C9 |
C8 |
C25 |
H19 |
297.7 |
301.0 |
| C9 |
C8 |
C25 |
H20 |
57.7 |
61.1 |
| C9 |
C8 |
C25 |
H21 |
177.7 |
181.0 |
| C12 |
C10 |
C9 |
N15 |
251.0 |
245.3 |
| C10 |
C9 |
C8 |
C25 |
66.9 |
50.5 |
| C9 |
C10 |
N15 |
C14 |
245.3 |
241.6 |
| H6 |
C9 |
C10 |
H7 |
118.9 |
120.5 |
| C24 |
C8 |
C7 |
C25 |
240.7 |
239.5 |
| C9 |
C8 |
C7 |
C25 |
122.4 |
119.6 |
| C7 |
C8 |
C25 |
H19 |
59.1 |
59.9 |
| C7 |
C8 |
C25 |
H20 |
179.1 |
180.0 |
| C7 |
C8 |
C25 |
H21 |
299.1 |
299.9 |
| H4 |
C7 |
C8 |
H5 |
241.6 |
119.3 |
| C7 |
C4 |
C3 |
H2 |
0.3 |
359.4 |
| C25 |
C8 |
C7 |
H4 |
49.0 |
171.5 |
| C25 |
C8 |
C7 |
H5 |
167.4 |
52.2 |
| H19 |
C25 |
C8 |
H20 |
240.0 |
239.9 |
| H19 |
C25 |
C8 |
H21 |
120.0 |
120.0 |
| H20 |
C25 |
C8 |
H21 |
240.0 |
240.0 |
| C10 |
N15 |
C14 |
N13 |
0.5 |
360.0 |
| N15 |
C14 |
N13 |
N18 |
179.8 |
180.0 |
| N13 |
C14 |
N18 |
H11 |
179.7 |
360.0 |
| N13 |
C14 |
N18 |
H12 |
359.7 |
180.0 |
| C10 |
C5 |
C6 |
H3 |
1.1 |
359.1 |
| N15 |
C10 |
C9 |
H6 |
144.0 |
167.6 |
| N15 |
C10 |
C9 |
H7 |
25.1 |
47.1 |
| N13 |
C14 |
N15 |
C10 |
0.5 |
360.0 |
| C10 |
N15 |
C14 |
N18 |
180.2 |
180.0 |
| C4 |
C3 |
C2 |
H1 |
180.3 |
180.1 |
| C5 |
C4 |
C3 |
H2 |
179.8 |
179.7 |
| C4 |
C5 |
C6 |
H3 |
179.7 |
179.7 |
| C3 |
C2 |
C1 |
C11 |
180.8 |
180.1 |
| C5 |
C6 |
C1 |
C11 |
179.3 |
179.7 |
| C6 |
C1 |
C2 |
C11 |
178.8 |
180.4 |
| C2 |
C1 |
C11 |
C23 |
220.6 |
0.1 |
| C2 |
C1 |
C6 |
C11 |
181.1 |
179.6 |
| C6 |
C1 |
C11 |
C23 |
41.8 |
179.7 |
| N20 |
C19 |
C11 |
C23 |
1.3 |
0.2 |
| C19 |
N20 |
C21 |
N22 |
359.7 |
360.0 |
| C19 |
N20 |
C21 |
H14 |
179.7 |
180.0 |
| C1 |
C11 |
C19 |
C23 |
177.5 |
179.8 |
| C19 |
C11 |
C23 |
N22 |
359.0 |
359.5 |
| C19 |
C11 |
C23 |
H15 |
179.1 |
179.7 |
| N13 |
C14 |
N15 |
N18 |
180.2 |
180.0 |
| N15 |
C14 |
N18 |
H11 |
360.0 |
180.0 |
| N15 |
C14 |
N18 |
H12 |
180.0 |
0.0 |
| N13 |
C14 |
N18 |
N15 |
179.7 |
180.0 |
| H11 |
N18 |
C14 |
H12 |
180.0 |
179.9 |
| C19 |
C11 |
C1 |
C23 |
182.6 |
180.2 |
| C1 |
C11 |
C23 |
N22 |
181.5 |
179.7 |
| C1 |
C11 |
C23 |
H15 |
1.6 |
359.9 |
| C21 |
N20 |
C19 |
H13 |
179.3 |
180.0 |
| N22 |
C21 |
N20 |
H14 |
180.0 |
180.0 |
| N20 |
C21 |
N22 |
H14 |
180.0 |
180.0 |
| C11 |
C23 |
N22 |
C21 |
0.1 |
0.6 |
| C11 |
C23 |
N22 |
H15 |
180.0 |
180.2 |
| C23 |
N22 |
C21 |
H14 |
180.6 |
179.7 |
| H1 |
C2 |
C1 |
C11 |
0.8 |
0.0 |
| H2 |
C3 |
C2 |
H1 |
0.3 |
0.1 |
| H3 |
C6 |
C1 |
C11 |
359.2 |
0.3 |
| H4 |
C7 |
C8 |
C25 |
49.0 |
171.5 |
| C8 |
C7 |
H4 |
H5 |
117.5 |
240.6 |
| H5 |
C7 |
C8 |
C25 |
167.4 |
52.2 |
| C8 |
C7 |
H5 |
H4 |
242.5 |
119.4 |
| H6 |
C9 |
C8 |
C25 |
187.5 |
170.3 |
| H6 |
C9 |
C10 |
N15 |
144.0 |
167.6 |
| C10 |
C9 |
H6 |
H7 |
241.7 |
239.5 |
| H7 |
C9 |
C8 |
C25 |
306.4 |
290.8 |
| H7 |
C9 |
C10 |
N15 |
25.1 |
47.1 |
| C10 |
C9 |
H7 |
H6 |
118.3 |
120.6 |
| H9 |
C17 |
H8 |
H10 |
119.9 |
120.0 |
| H8 |
C17 |
H9 |
H10 |
240.0 |
240.0 |
| H8 |
C17 |
H10 |
H9 |
120.0 |
120.0 |
| C14 |
N18 |
H11 |
H12 |
180.0 |
180.1 |
| C14 |
N18 |
H12 |
H11 |
180.0 |
179.9 |
| H13 |
C19 |
N20 |
C21 |
179.3 |
180.0 |
| H13 |
C19 |
C11 |
C23 |
181.3 |
180.2 |
| N20 |
C21 |
H14 |
N22 |
180.0 |
180.0 |
| C11 |
C23 |
H15 |
N22 |
180.0 |
179.8 |
| H16 |
C24 |
C8 |
C25 |
299.7 |
299.6 |
| H17 |
C24 |
H16 |
H18 |
120.0 |
120.0 |
| H17 |
C24 |
C8 |
C25 |
59.7 |
59.5 |
| H16 |
C24 |
H17 |
H18 |
240.0 |
240.0 |
| H18 |
C24 |
C8 |
C25 |
179.7 |
179.6 |
| H16 |
C24 |
H18 |
H17 |
120.0 |
120.0 |
| C8 |
C25 |
H19 |
H20 |
120.0 |
120.0 |
| C8 |
C25 |
H19 |
H21 |
240.0 |
240.1 |
| H20 |
C25 |
H19 |
H21 |
120.0 |
120.1 |
| C8 |
C25 |
H20 |
H19 |
240.0 |
240.0 |
| C8 |
C25 |
H20 |
H21 |
120.0 |
119.9 |
| H19 |
C25 |
H20 |
H21 |
240.0 |
239.9 |
| C8 |
C25 |
H21 |
H19 |
120.0 |
120.0 |
| C8 |
C25 |
H21 |
H20 |
240.0 |
240.1 |
| H19 |
C25 |
H21 |
H20 |
120.0 |
120.1 |