PDB Chemical Component 1M3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1M3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C26 C23 1.523 1.530
O2 S1 1.428 1.421
C24 C23 1.524 1.530
N7 C23 1.448 1.465
N7 S1 1.757 1.655
C23 C25 1.522 1.530
S1 O1 1.435 1.421
S1 C21 1.777 1.762
C5 C2 1.509 1.507
C22 C21 1.385 1.381
C22 C17 1.386 1.390
C21 C20 1.397 1.383
N1 C17 1.361 1.398
N1 C1 1.353 1.386
C2 C1 1.388 1.396
C2 C3 1.385 1.382
C17 C18 1.398 1.388
C1 N3 1.343 1.329
C20 C19 1.396 1.382
C3 N2 1.336 1.325
C18 C19 1.399 1.381
N3 C4 1.335 1.325
N2 C4 1.340 1.325
C4 N4 1.365 1.385
N4 C6 1.364 1.400
C11 C6 1.392 1.389
C11 C10 1.383 1.380
C6 C7 1.398 1.388
C10 C9 1.393 1.389
C7 C8 1.393 1.381
C9 C8 1.400 1.389
C9 N5 1.406 1.399
C15 N5 1.482 1.470
C15 C14 1.519 1.531
N5 C12 1.484 1.469
C14 N6 1.466 1.469
C12 C13 1.531 1.530
N6 C13 1.475 1.469
N6 C16 1.472 1.469
N7 H1 1.000 0.970
C26 H2 1.100 1.090
C26 H3 1.100 1.090
C26 H4 1.100 1.090
C25 H5 1.100 1.090
C25 H6 1.101 1.090
C25 H7 1.100 1.090
C24 H8 1.100 1.091
C24 H9 1.100 1.090
C24 H10 1.100 1.090
C20 H11 1.080 1.081
C19 H12 1.080 1.080
C18 H13 1.080 1.080
C22 H14 1.080 1.080
N1 H15 1.000 0.970
C3 H16 1.080 1.079
C5 H17 1.100 1.090
C5 H18 1.100 1.090
C5 H19 1.100 1.089
N4 H20 1.000 0.970
C11 H21 1.080 1.081
C10 H22 1.080 1.080
C8 H23 1.080 1.080
C7 H24 1.080 1.081
C15 H25 1.100 1.090
C15 H26 1.100 1.090
C14 H27 1.100 1.090
C14 H28 1.100 1.089
C16 H30 1.100 1.089
C16 H31 1.101 1.090
C16 H32 1.100 1.090
C13 H33 1.100 1.090
C13 H34 1.100 1.091
C12 H35 1.100 1.090
C12 H36 1.100 1.090

Bond Angles for 1M3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C26 C23 C25 110.6 109.4
O2 S1 O1 116.2 123.1
O2 S1 C21 106.5 106.4
N7 C23 C25 111.1 109.5
C23 N7 H1 105.1 120.0
N7 S1 C21 104.1 107.2
C23 C25 H5 109.5 109.4
C23 C25 H6 109.5 109.5
C23 C25 H7 109.5 109.5
O1 S1 C21 106.9 106.4
S1 C21 C20 122.2 120.0
C17 C22 H14 120.0 120.0
C21 C20 C19 119.0 120.2
C21 C20 H11 120.5 119.9
N1 C1 N3 117.2 120.5
C1 N1 H15 113.8 120.1
C2 C3 H16 119.2 120.4
C17 C18 H13 119.6 120.0
C1 N3 C4 120.1 120.6
C19 C20 H11 120.5 119.9
C20 C19 H12 120.3 120.0
C18 C19 H12 120.2 119.9
N3 C4 N4 119.9 119.2
N2 C4 N4 118.5 119.2
C4 N4 C6 133.6 120.0
C4 N4 H20 113.2 120.0
N4 C6 C7 121.0 120.0
C6 N4 H20 113.2 120.0
C11 C6 C7 119.3 119.9
C11 C10 C9 120.2 120.0
C10 C11 H21 119.7 120.0
C11 C10 H22 119.9 120.0
C6 C7 C8 120.6 120.1
C6 C7 H24 119.7 120.0
C10 C9 C8 119.9 120.0
C10 C9 N5 117.6 120.0
C9 C10 H22 119.9 120.0
C7 C8 H23 120.3 120.0
C8 C9 N5 122.5 120.0
C9 C8 H23 120.3 120.0
C9 N5 C12 126.0 111.0
C15 N5 C12 113.1 110.9
C15 C14 N6 108.4 109.3
C14 C15 H25 108.0 109.5
C14 C15 H26 108.0 109.4
C15 C14 H27 109.7 109.4
C15 C14 H28 109.8 109.5
N5 C12 C13 113.2 109.4
N5 C12 H35 108.5 109.5
N5 C12 H36 108.5 109.5
C14 N6 C13 108.8 110.9
C14 N6 C16 108.6 111.0
N6 C14 H27 109.7 109.5
N6 C14 H28 109.7 109.5
C12 C13 H33 109.0 109.5
C12 C13 H34 109.0 109.5
C16 N6 C13 110.1 111.0
N6 C13 H33 109.0 109.5
N6 C13 H34 109.1 109.4
N6 C16 H30 109.5 109.5
N6 C16 H31 109.5 109.4
N6 C16 H32 109.5 109.4
H2 C26 H3 109.5 109.4
H2 C26 H4 109.4 109.5
H3 C26 H4 109.5 109.4
H5 C25 H6 109.5 109.4
H5 C25 H7 109.5 109.5
H6 C25 H7 109.5 109.5
H8 C24 H9 109.5 109.5
H8 C24 H10 109.4 109.4
H9 C24 H10 109.5 109.5
H17 C5 H18 109.5 109.5
H17 C5 H19 109.4 109.5
H18 C5 H19 109.5 109.5
H25 C15 H26 109.5 109.5
H27 C14 H28 109.5 109.5
H30 C16 H31 109.4 109.5
H30 C16 H32 109.5 109.5
H31 C16 H32 109.5 109.5
H33 C13 H34 109.5 109.5
H35 C12 H36 109.5 109.5

Torsion Angles for 1M3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N7 C23 C26 C25 238.0 120.0
C26 C23 N7 H1 200.5 126.4
C26 C23 C25 H5 180.0 172.6
C26 C23 C25 H6 300.0 292.5
C26 C23 C25 H7 60.0 52.6
N7 S1 O2 C21 249.7 245.9
O1 S1 O2 C21 118.9 122.9
O2 S1 C21 C20 144.1 326.7
C24 C23 N7 H1 318.4 6.4
C24 C23 C25 H5 59.4 292.5
C24 C23 C25 H6 179.4 52.5
C24 C23 C25 H7 299.4 172.5
C26 C23 N7 C25 121.7 240.0
C23 N7 S1 C21 88.1 67.4
N7 C23 C25 H5 300.4 52.6
N7 C23 C25 H6 60.4 172.6
N7 C23 C25 H7 180.4 292.6
O2 S1 N7 C21 112.0 113.5
O1 S1 N7 C21 242.8 246.4
N7 S1 C21 C20 255.6 80.3
C25 C23 N7 H1 78.8 246.4
H5 C25 C23 H6 240.0 240.1
H5 C25 C23 H7 120.0 120.0
H6 C25 C23 H7 240.0 239.9
O2 S1 O1 C21 241.4 237.1
N7 S1 O1 C21 115.7 114.1
O1 S1 C21 C20 19.2 193.8
O2 S1 C21 O1 124.8 132.9
S1 C21 C20 C19 181.7 180.0
S1 C21 C20 H11 1.7 360.0
C5 C2 C3 H16 359.8 0.1
C22 C21 C20 H11 179.5 180.3
C22 C17 C18 H13 180.8 179.7
C19 C20 C21 H11 180.0 180.0
C21 C20 C19 H12 180.6 180.0
N1 C17 C22 H14 1.3 359.7
N1 C17 C18 H13 358.9 0.3
N1 C1 N3 C4 180.1 180.0
C2 C1 N1 H15 340.9 354.4
C17 C18 C19 H12 179.2 180.0
N3 C1 N1 H15 160.8 174.6
C1 N3 C4 N4 180.0 180.0
C21 C20 C19 H11 180.0 180.0
C18 C19 C20 H12 180.0 180.0
C3 N2 C4 N4 180.3 180.0
C18 C19 C20 H11 180.6 180.0
C20 C19 C18 H12 180.0 180.0
N2 C4 N3 N4 180.0 180.0
N3 C4 N4 C6 359.8 185.0
N3 C4 N4 H20 179.8 5.0
N3 C4 N2 N4 180.0 180.0
N2 C4 N4 C6 179.7 5.0
N2 C4 N4 H20 359.8 185.0
C4 N4 C6 C7 178.9 212.9
C6 N4 C4 H20 180.0 180.0
C4 N4 C6 H20 180.0 180.0
C11 C6 N4 C7 180.5 180.2
N4 C6 C7 C8 180.5 179.7
N4 C6 C7 H24 0.4 360.0
N4 C6 C11 C7 179.5 179.8
C11 C6 N4 H20 179.4 213.2
C11 C6 C7 C8 360.0 359.5
C11 C6 C7 H24 179.9 179.8
C10 C11 C6 C7 359.9 0.2
C11 C10 C9 C8 359.1 360.0
C11 C10 C9 N5 181.1 180.0
C9 C10 C11 H22 180.0 180.0
C7 C6 N4 H20 358.9 32.9
C6 C7 C8 H23 179.7 180.3
C9 C10 C11 H21 180.6 180.0
C11 C10 C9 H22 180.0 180.0
C8 C9 C10 N5 178.0 180.0
C10 C9 C8 H23 180.8 180.0
C10 C9 N5 C12 195.0 180.0
C6 C7 C8 H24 180.0 180.3
C7 C8 C9 N5 178.7 179.7
C9 C8 C7 H23 180.0 180.3
C6 C7 C8 C9 359.7 0.5
C10 C9 C8 N5 182.1 180.0
C8 C9 C10 H22 179.0 180.0
C7 C8 C9 H23 180.0 179.7
C8 C9 N5 C12 17.1 360.0
C10 C9 N5 C8 177.9 180.0
N5 C9 C10 H22 1.1 0.0
N5 C9 C8 H23 358.7 0.0
C15 N5 C9 C12 191.5 236.1
C9 N5 C12 C13 231.9 176.8
C9 N5 C12 H35 352.5 296.8
C9 N5 C12 H36 111.4 56.8
C9 N5 C15 C12 169.9 123.9
C15 N5 C12 C13 41.1 300.7
C15 N5 C12 H35 161.6 60.7
C15 N5 C12 H36 280.5 180.7
C14 C15 N5 C12 315.8 59.3
C15 C14 N6 C13 296.6 59.3
C15 C14 N6 C16 176.8 295.4
N6 C14 C15 H27 240.2 240.1
N6 C14 C15 H28 119.8 120.0
H25 C15 C14 H26 118.3 120.1
H27 C14 C15 H28 239.6 239.9
N5 C12 C13 H33 69.1 298.4
N5 C12 C13 H34 188.6 178.3
H35 C12 N5 H36 241.1 240.0
N6 C14 C15 H25 294.4 181.7
N6 C14 C15 H26 176.1 61.6
C15 C14 N6 H27 119.8 119.9
C15 C14 N6 H28 240.2 240.0
C16 N6 C14 C13 240.1 236.1
C14 N6 C13 H33 302.5 60.6
C14 N6 C13 H34 183.0 180.7
C14 N6 C16 H30 180.0 60.0
C14 N6 C16 H31 300.0 180.1
C14 N6 C16 H32 60.0 300.1
H27 C14 N6 H28 120.4 120.1
N5 C12 C13 H35 120.6 120.0
N5 C12 C13 H36 239.5 240.0
N6 C13 C12 H33 239.8 120.0
N6 C13 C12 H34 120.3 240.1
H33 C13 C12 H34 240.5 120.1
N5 C12 C13 N6 308.9 58.4
C14 N6 C13 C16 241.1 236.1
C13 N6 C14 H27 176.8 299.4
C13 N6 C14 H28 56.5 179.3
C12 C13 N6 H33 120.2 240.0
C12 C13 N6 H34 239.7 120.0
C13 N6 C16 H30 61.0 296.2
C13 N6 C16 H31 181.0 56.2
C13 N6 C16 H32 300.9 176.2
H33 C13 N6 H34 119.5 240.0
C14 N6 C16 C13 119.0 123.8
C16 N6 C14 H27 57.0 175.5
C16 N6 C14 H28 296.6 55.4
C16 N6 C13 H33 61.5 184.5
C16 N6 C13 H34 302.0 304.5
H30 C16 N6 H31 240.0 240.0
H30 C16 N6 H32 120.0 119.9
H31 C16 N6 H32 240.0 240.0
H1 N7 C23 C25 78.8 246.4
H1 N7 S1 C21 325.8 247.4
H2 C26 C23 C25 58.9 309.9
H3 C26 H2 H4 120.0 120.0
H3 C26 C23 C25 178.9 69.8
H2 C26 H3 H4 240.0 240.0
H4 C26 C23 C25 299.0 189.8
H2 C26 H4 H3 120.0 120.0
C23 C25 H5 H6 120.0 120.0
C23 C25 H5 H7 240.0 240.0
H6 C25 H5 H7 120.0 120.0
C23 C25 H6 H5 240.0 240.0
C23 C25 H6 H7 120.0 120.1
H5 C25 H6 H7 240.0 240.0
C23 C25 H7 H5 120.0 120.0
C23 C25 H7 H6 240.0 239.9
H5 C25 H7 H6 120.0 119.9
H9 C24 H8 H10 120.0 120.1
H8 C24 H9 H10 240.0 240.0
H8 C24 H10 H9 120.0 120.0
C21 C20 H11 C19 180.0 180.0
H11 C20 C19 H12 0.6 0.0
H12 C19 C20 H11 0.6 0.0
H13 C18 C19 H12 359.2 360.0
H15 N1 C1 N3 160.8 174.6
H18 C5 H17 H19 120.0 120.0
H17 C5 H18 H19 240.0 240.0
H17 C5 H19 H18 120.0 120.0
C4 N4 H20 C6 180.0 180.0
H20 N4 C6 C7 358.9 32.9
H21 C11 C6 C7 179.9 180.3
H21 C11 C10 C9 180.6 180.0
H21 C11 C10 H22 0.6 359.9
C11 C10 H22 C9 180.0 180.0
H22 C10 C11 H21 0.6 359.9
H22 C10 C9 C8 179.0 180.0
H22 C10 C9 N5 1.1 0.0
H23 C8 C9 N5 358.7 0.0
C6 C7 H24 C8 180.0 179.7
H24 C7 C8 H23 359.7 0.0
H25 C15 N5 C12 76.7 179.3
H25 C15 C14 N6 294.4 181.7
C14 C15 H25 H26 242.6 240.0
H25 C15 C14 H27 54.2 301.6
H25 C15 C14 H28 174.6 61.7
H26 C15 N5 C12 195.0 299.4
H26 C15 C14 N6 176.1 61.6
C14 C15 H26 H25 117.4 120.1
H26 C15 C14 H27 295.9 181.5
H26 C15 C14 H28 56.2 301.6
C15 C14 H27 N6 241.0 240.2
H27 C14 C15 H25 54.2 301.6
H27 C14 C15 H26 295.9 181.5
C15 C14 H27 H28 120.5 120.1
H27 C14 N6 C13 176.8 299.4
H27 C14 N6 C16 57.0 175.5
N6 C14 H27 H28 239.5 239.9
C15 C14 H28 N6 119.0 119.9
H28 C14 C15 H25 174.6 61.7
H28 C14 C15 H26 56.2 301.6
C15 C14 H28 H27 239.5 240.0
H28 C14 N6 C13 56.5 179.3
H28 C14 N6 C16 296.6 55.4
N6 C14 H28 H27 120.5 120.1
H30 C16 N6 C13 61.0 296.2
N6 C16 H30 H31 120.0 120.0
N6 C16 H30 H32 240.0 240.1
H31 C16 H30 H32 120.0 120.1
H31 C16 N6 C13 181.0 56.2
N6 C16 H31 H30 240.0 240.0
N6 C16 H31 H32 120.0 120.0
H30 C16 H31 H32 240.0 240.0
H32 C16 N6 C13 300.9 176.2
N6 C16 H32 H30 120.1 120.0
N6 C16 H32 H31 240.0 240.0
H30 C16 H32 H31 120.0 120.1
C12 C13 H33 H34 119.2 239.9
N6 C13 H33 H34 240.8 120.0
C12 C13 H34 H33 240.8 120.1
N6 C13 H34 H33 119.2 240.0
N5 C12 H35 C13 236.6 240.1
N5 C12 H35 H36 118.3 120.0
H35 C12 C13 H33 308.5 178.5
H35 C12 C13 H34 68.0 58.4
N5 C12 H36 C13 123.4 119.9
N5 C12 H36 H35 241.7 240.0
H36 C12 C13 H33 189.7 58.4
H36 C12 C13 H34 309.1 298.3