PDB Chemical Component 1JH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1JH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C28 |
C3 |
1.505 |
1.507 |
| C24 |
C23 |
1.445 |
1.383 |
| C24 |
C25 |
1.439 |
1.383 |
| C23 |
C22 |
1.433 |
1.381 |
| C3 |
C4 |
1.433 |
1.382 |
| C3 |
C2 |
1.428 |
1.383 |
| C25 |
C26 |
1.435 |
1.381 |
| C22 |
C21 |
1.453 |
1.387 |
| C4 |
C5 |
1.428 |
1.383 |
| C2 |
C1 |
1.423 |
1.381 |
| C26 |
C21 |
1.446 |
1.388 |
| C21 |
O20 |
1.466 |
1.359 |
| C5 |
C6 |
1.432 |
1.382 |
| O20 |
C14 |
1.386 |
1.359 |
| C1 |
C6 |
1.422 |
1.382 |
| O18 |
C17 |
1.356 |
1.215 |
| C13 |
C14 |
1.418 |
1.382 |
| C13 |
C12 |
1.423 |
1.399 |
| C14 |
C15 |
1.430 |
1.390 |
| C6 |
S7 |
1.793 |
1.762 |
| C17 |
C12 |
1.459 |
1.473 |
| C17 |
O19 |
1.222 |
1.348 |
| C12 |
C11 |
1.452 |
1.403 |
| C15 |
C16 |
1.421 |
1.380 |
| C11 |
C16 |
1.425 |
1.389 |
| C11 |
N10 |
1.474 |
1.391 |
| S7 |
N10 |
1.743 |
1.656 |
| S7 |
O8 |
1.461 |
1.420 |
| S7 |
O9 |
1.463 |
1.421 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
H3 |
1.081 |
1.081 |
| C5 |
H4 |
1.080 |
1.080 |
| N10 |
H5 |
1.000 |
0.970 |
| C13 |
H6 |
1.080 |
1.079 |
| C15 |
H7 |
1.080 |
1.080 |
| C16 |
H8 |
1.080 |
1.080 |
| O19 |
H9 |
0.950 |
0.967 |
| C22 |
H10 |
1.080 |
1.080 |
| C23 |
H11 |
1.080 |
1.080 |
| C24 |
H12 |
1.080 |
1.080 |
| C25 |
H13 |
1.080 |
1.079 |
| C26 |
H14 |
1.080 |
1.080 |
| C28 |
H15 |
1.100 |
1.090 |
| C28 |
H16 |
1.100 |
1.090 |
| C28 |
H17 |
1.100 |
1.089 |
Bond Angles for 1JH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C24 |
C23 |
H11 |
120.0 |
120.0 |
| C24 |
C25 |
C26 |
119.8 |
120.0 |
| C25 |
C24 |
H12 |
119.8 |
119.9 |
| C24 |
C25 |
H13 |
120.1 |
120.0 |
| C23 |
C22 |
H10 |
120.0 |
120.0 |
| C3 |
C4 |
C5 |
120.4 |
120.0 |
| C3 |
C4 |
H3 |
119.8 |
120.0 |
| C3 |
C2 |
H2 |
119.6 |
120.0 |
| C26 |
C25 |
H13 |
120.1 |
120.0 |
| C25 |
C26 |
H14 |
119.8 |
120.1 |
| C4 |
C5 |
C6 |
119.4 |
120.0 |
| C5 |
C4 |
H3 |
119.8 |
120.0 |
| C4 |
C5 |
H4 |
120.3 |
120.0 |
| C2 |
C1 |
C6 |
119.5 |
120.0 |
| C2 |
C1 |
H1 |
120.2 |
120.0 |
| C1 |
C6 |
C5 |
120.6 |
120.0 |
| C5 |
C6 |
S7 |
120.1 |
119.9 |
| C6 |
C5 |
H4 |
120.3 |
120.0 |
| C1 |
C6 |
S7 |
119.3 |
120.0 |
| C6 |
C1 |
H1 |
120.2 |
120.0 |
| O18 |
C17 |
O19 |
122.3 |
120.0 |
| C13 |
C14 |
C15 |
118.9 |
120.3 |
| C14 |
C13 |
H6 |
119.3 |
120.1 |
| C14 |
C15 |
C16 |
120.6 |
120.4 |
| C14 |
C15 |
H7 |
119.7 |
119.9 |
| C6 |
S7 |
N10 |
106.5 |
107.2 |
| C6 |
S7 |
O8 |
106.8 |
106.4 |
| C6 |
S7 |
O9 |
104.7 |
106.4 |
| C17 |
O19 |
H9 |
109.5 |
117.0 |
| C12 |
C11 |
C16 |
118.7 |
119.8 |
| C11 |
C16 |
C15 |
120.8 |
120.1 |
| C16 |
C15 |
H7 |
119.7 |
119.8 |
| C15 |
C16 |
H8 |
119.6 |
119.9 |
| C11 |
C16 |
H8 |
119.6 |
119.9 |
| C11 |
N10 |
H5 |
106.3 |
120.0 |
| O8 |
S7 |
N10 |
112.9 |
106.4 |
| O9 |
S7 |
N10 |
107.4 |
106.4 |
| S7 |
N10 |
H5 |
106.3 |
120.0 |
| O8 |
S7 |
O9 |
117.7 |
123.2 |
| H15 |
C28 |
H16 |
109.4 |
109.5 |
| H15 |
C28 |
H17 |
109.4 |
109.5 |
| H16 |
C28 |
H17 |
109.5 |
109.5 |
Torsion Angles for 1JH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C28 |
C3 |
C4 |
H3 |
359.9 |
359.9 |
| C28 |
C3 |
C2 |
H2 |
0.1 |
0.0 |
| C24 |
C23 |
C22 |
H10 |
180.1 |
180.0 |
| C25 |
C24 |
C23 |
H11 |
179.9 |
179.9 |
| C26 |
C25 |
C24 |
H13 |
180.0 |
179.8 |
| C24 |
C25 |
C26 |
H14 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H2 |
180.4 |
180.0 |
| C3 |
C4 |
C5 |
C6 |
0.4 |
360.0 |
| C5 |
C4 |
C3 |
H3 |
180.0 |
180.1 |
| C3 |
C4 |
C5 |
H4 |
180.3 |
180.0 |
| C3 |
C2 |
C1 |
C6 |
359.6 |
0.1 |
| C3 |
C2 |
C1 |
H1 |
179.6 |
179.8 |
| C26 |
C25 |
C24 |
H12 |
180.0 |
179.8 |
| C24 |
C25 |
C26 |
H13 |
180.0 |
180.2 |
| C3 |
C4 |
C5 |
H3 |
180.0 |
179.9 |
| C1 |
C6 |
C5 |
C4 |
359.7 |
0.0 |
| C4 |
C5 |
C6 |
S7 |
180.4 |
180.3 |
| C6 |
C5 |
C4 |
H4 |
180.0 |
180.0 |
| C2 |
C1 |
C6 |
C5 |
0.4 |
359.9 |
| C2 |
C1 |
C6 |
S7 |
179.6 |
179.7 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.4 |
| C6 |
C5 |
C4 |
H3 |
180.4 |
180.1 |
| C4 |
C5 |
C6 |
H4 |
180.0 |
180.0 |
| C1 |
C6 |
C5 |
S7 |
179.2 |
179.8 |
| C5 |
C6 |
C1 |
H1 |
180.3 |
180.3 |
| C5 |
C6 |
S7 |
N10 |
258.3 |
269.7 |
| C5 |
C6 |
S7 |
O8 |
19.3 |
23.3 |
| C5 |
C6 |
S7 |
O9 |
144.8 |
156.2 |
| O20 |
C14 |
C13 |
H6 |
359.7 |
0.0 |
| O20 |
C14 |
C15 |
H7 |
0.2 |
360.0 |
| C4 |
C5 |
C6 |
C1 |
359.7 |
0.0 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.6 |
| C5 |
C6 |
C1 |
S7 |
180.8 |
180.2 |
| C1 |
C6 |
C5 |
H4 |
179.7 |
180.0 |
| C1 |
C6 |
S7 |
N10 |
79.1 |
89.9 |
| C1 |
C6 |
S7 |
O8 |
200.0 |
203.5 |
| C1 |
C6 |
S7 |
O9 |
325.6 |
336.4 |
| O18 |
C17 |
O19 |
H9 |
0.0 |
360.0 |
| C13 |
C14 |
C15 |
C16 |
359.7 |
359.9 |
| C13 |
C14 |
C15 |
H7 |
179.7 |
179.9 |
| C13 |
C12 |
C11 |
C16 |
359.4 |
360.0 |
| C15 |
C14 |
C13 |
H6 |
180.1 |
180.1 |
| C11 |
C16 |
C15 |
C14 |
0.0 |
0.1 |
| C16 |
C15 |
C14 |
H7 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
H8 |
180.0 |
180.3 |
| C1 |
C6 |
S7 |
C5 |
180.8 |
180.2 |
| S7 |
C6 |
C5 |
H4 |
0.5 |
0.2 |
| S7 |
C6 |
C1 |
H1 |
359.6 |
0.1 |
| O8 |
S7 |
C6 |
N10 |
120.9 |
113.6 |
| O9 |
S7 |
C6 |
N10 |
246.4 |
246.5 |
| C6 |
S7 |
N10 |
H5 |
304.5 |
241.1 |
| O8 |
S7 |
C6 |
O9 |
234.5 |
227.1 |
| C12 |
C11 |
C16 |
C15 |
0.4 |
360.0 |
| C12 |
C11 |
C16 |
H8 |
180.4 |
179.8 |
| C12 |
C11 |
N10 |
H5 |
350.0 |
36.1 |
| C14 |
C15 |
C16 |
H7 |
180.0 |
180.0 |
| C11 |
C16 |
C15 |
H8 |
180.0 |
179.8 |
| C14 |
C15 |
C16 |
C11 |
0.0 |
0.1 |
| C11 |
C16 |
C15 |
H7 |
180.0 |
180.1 |
| C15 |
C16 |
C11 |
H8 |
180.0 |
180.2 |
| C16 |
C11 |
N10 |
H5 |
170.3 |
215.8 |
| S7 |
N10 |
C11 |
H5 |
238.3 |
179.9 |
| C6 |
S7 |
N10 |
O8 |
116.9 |
113.6 |
| C6 |
S7 |
N10 |
O9 |
248.3 |
246.5 |
| C11 |
N10 |
S7 |
H5 |
121.7 |
180.1 |
| O8 |
S7 |
N10 |
O9 |
131.4 |
132.9 |
| C6 |
S7 |
O8 |
N10 |
243.3 |
245.9 |
| C6 |
S7 |
O8 |
O9 |
117.2 |
122.9 |
| O9 |
S7 |
O8 |
N10 |
126.1 |
123.0 |
| O8 |
S7 |
N10 |
H5 |
187.6 |
127.5 |
| C6 |
S7 |
O9 |
N10 |
112.9 |
114.1 |
| C6 |
S7 |
O9 |
O8 |
241.7 |
237.0 |
| O8 |
S7 |
O9 |
N10 |
231.3 |
237.0 |
| O9 |
S7 |
N10 |
H5 |
56.1 |
354.6 |
| C2 |
C1 |
H1 |
C6 |
180.0 |
180.4 |
| H1 |
C1 |
C6 |
C5 |
180.3 |
180.3 |
| H1 |
C1 |
C6 |
S7 |
359.6 |
0.1 |
| H2 |
C2 |
C1 |
C6 |
179.6 |
180.0 |
| H2 |
C2 |
C1 |
H1 |
359.6 |
359.7 |
| C3 |
C4 |
H3 |
C5 |
180.0 |
180.1 |
| H3 |
C4 |
C5 |
C6 |
180.4 |
180.1 |
| H3 |
C4 |
C5 |
H4 |
0.3 |
0.1 |
| C4 |
C5 |
H4 |
C6 |
180.0 |
180.0 |
| H4 |
C5 |
C4 |
H3 |
0.3 |
0.1 |
| H4 |
C5 |
C6 |
S7 |
0.5 |
0.2 |
| H6 |
C13 |
C14 |
C15 |
180.1 |
180.1 |
| C14 |
C15 |
H7 |
C16 |
180.0 |
180.0 |
| H7 |
C15 |
C16 |
H8 |
360.0 |
0.3 |
| C11 |
C16 |
H8 |
C15 |
180.0 |
180.2 |
| H8 |
C16 |
C15 |
H7 |
360.0 |
0.3 |
| H11 |
C23 |
C22 |
H10 |
0.1 |
0.0 |
| H12 |
C24 |
C23 |
H11 |
359.9 |
360.0 |
| H12 |
C24 |
C25 |
C26 |
180.0 |
179.8 |
| H12 |
C24 |
C25 |
H13 |
0.0 |
360.0 |
| C24 |
C25 |
H13 |
C26 |
180.0 |
179.8 |
| H13 |
C25 |
C24 |
H12 |
0.0 |
360.0 |
| H13 |
C25 |
C26 |
H14 |
0.0 |
359.8 |
| H14 |
C26 |
C25 |
H13 |
0.0 |
359.8 |
| H16 |
C28 |
H15 |
H17 |
120.0 |
120.1 |
| H15 |
C28 |
H16 |
H17 |
240.0 |
239.9 |
| H15 |
C28 |
H17 |
H16 |
120.0 |
120.1 |