PDB Chemical Component 1GN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1GN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.544 1.531
C2 C1 1.528 1.530
C2 N2 1.451 1.469
C2 H2 1.115 1.090
C3 C4 1.532 1.532
C3 O3 1.421 1.429
C3 H3 1.114 1.090
C4 O4 1.418 1.428
C4 C5 1.525 1.531
C4 H4 1.115 1.090
O5 C1 1.442 1.426
O5 C5 1.452 1.424
C1 O1 1.389 1.428
C1 H1 1.115 1.089
O1 HO1 0.950 0.967
N2 HN21 1.019 1.008
N2 HN22 1.020 1.009
O3 HO3 0.951 0.968
O4 HO4 0.950 0.967
C5 C6 1.512 1.531
C5 H5 1.115 1.090
C6 O6 1.418 1.428
C6 H61 1.115 1.091
C6 H62 1.115 1.089
O6 HO6 0.951 0.966

Bond Angles for 1GN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C1 108.8 109.2
C3 C2 N2 111.3 109.6
C3 C2 H2 108.7 109.5
C2 C3 C4 110.0 108.7
C2 C3 O3 110.9 109.9
C2 C3 H3 108.1 109.5
C1 C2 N2 109.7 109.6
C1 C2 H2 110.3 109.6
C2 C1 O5 110.1 109.8
C2 C1 O1 109.8 109.5
C2 C1 H1 108.6 109.4
N2 C2 H2 107.9 109.5
C2 N2 HN21 111.3 106.7
C2 N2 HN22 111.5 106.7
C4 C3 O3 109.3 109.6
C4 C3 H3 109.7 109.6
C3 C4 O4 109.9 109.5
C3 C4 C5 109.9 109.0
C3 C4 H4 108.9 109.6
O3 C3 H3 108.8 109.6
C3 O3 HO3 110.9 106.8
O4 C4 C5 109.4 109.6
O4 C4 H4 109.4 109.6
C4 O4 HO4 109.9 106.8
C5 C4 H4 109.3 109.5
C4 C5 O5 110.2 109.8
C4 C5 C6 112.2 109.3
C4 C5 H5 106.5 109.4
C1 O5 C5 112.5 107.6
O5 C1 O1 108.8 109.4
O5 C1 H1 109.6 109.3
O5 C5 C6 107.6 109.4
O5 C5 H5 111.2 109.5
O1 C1 H1 109.9 109.4
C1 O1 HO1 109.8 106.9
HN21 N2 HN22 111.6 106.7
C6 C5 H5 109.2 109.4
C5 C6 O6 111.1 109.5
C5 C6 H61 111.6 109.4
C5 C6 H62 111.6 109.5
O6 C6 H61 111.6 109.5
O6 C6 H62 111.6 109.5
C6 O6 HO6 111.1 106.8
H61 C6 H62 98.7 109.5

Torsion Angles for 1GN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 N2 121.1 120.0
C1 C2 C3 H2 239.8 240.0
C3 C2 C1 O5 58.3 61.1
C3 C2 C1 O1 178.1 181.2
C3 C2 C1 H1 298.3 301.1
N2 C2 C3 H2 118.7 120.1
C3 C2 N2 HN21 180.0 179.8
C3 C2 N2 HN22 54.7 293.6
C4 C3 C2 O3 121.1 119.9
C4 C3 C2 H3 240.3 240.3
C2 C3 C4 O4 294.3 293.7
C2 C3 C4 C5 54.8 53.5
C2 C3 C4 H4 174.6 173.4
O3 C3 C2 H3 119.2 120.4
C2 C3 O3 HO3 180.0 299.3
C3 C2 C1 N2 238.0 240.0
C3 C2 C1 H2 119.3 119.9
C1 C2 C3 C4 304.5 306.4
C1 C2 C3 O3 183.4 186.5
C1 C2 C3 H3 64.2 66.1
N2 C2 C1 H2 241.3 239.9
C1 C2 N2 HN21 59.5 60.1
C1 C2 N2 HN22 294.2 173.9
C2 C1 O5 C5 297.9 292.5
O5 C1 C2 O1 240.2 239.9
O5 C1 C2 H1 120.0 120.0
O1 C1 C2 H1 239.8 240.1
C2 C1 O1 HO1 180.1 180.0
C3 C2 N2 C1 120.5 119.7
C3 C2 N2 H2 240.8 239.9
N2 C2 C3 C4 183.4 186.4
N2 C2 C3 O3 62.4 66.6
N2 C2 C3 H3 303.2 306.1
C1 C2 N2 H2 120.2 120.2
N2 C2 C1 O5 180.4 181.1
N2 C2 C1 O1 300.2 301.2
N2 C2 C1 H1 60.4 61.1
HN21 N2 C2 HN22 125.3 246.2
C3 C2 H2 C1 240.7 240.3
C3 C2 H2 N2 120.9 120.1
H2 C2 C3 C4 64.7 66.4
H2 C2 C3 O3 303.7 306.5
H2 C2 C3 H3 184.5 186.0
C1 C2 H2 N2 240.2 239.8
H2 C2 C1 O5 299.1 301.2
H2 C2 C1 O1 58.9 61.3
H2 C2 C1 H1 179.1 181.2
H2 C2 N2 HN21 299.2 299.9
H2 C2 N2 HN22 173.9 53.7
C4 C3 C2 C1 304.5 306.4
C4 C3 C2 N2 183.4 186.4
C4 C3 C2 H2 64.7 66.4
C2 C3 C4 O3 238.0 239.9
C2 C3 C4 H3 118.8 119.6
O3 C3 C4 H3 240.8 239.7
C4 C3 O3 HO3 58.5 180.0
O4 C4 C3 C5 239.5 240.1
O4 C4 C3 H4 119.8 120.2
C3 C4 O4 HO4 180.0 179.6
C5 C4 C3 H4 240.2 240.1
C3 C4 C5 O5 303.7 298.8
C3 C4 C5 C6 183.9 178.7
C3 C4 C5 H5 64.5 59.0
O3 C3 C2 C1 183.4 186.5
O3 C3 C2 N2 62.4 66.6
O3 C3 C2 H2 303.7 306.5
C2 C3 O3 C4 121.5 119.4
C2 C3 O3 H3 241.2 239.7
C4 C3 O3 H3 119.7 120.3
O3 C3 C4 O4 56.3 53.8
O3 C3 C4 C5 176.8 173.6
O3 C3 C4 H4 296.6 293.5
H3 C3 C2 C1 64.2 66.1
H3 C3 C2 N2 303.2 306.1
H3 C3 C2 H2 184.5 186.0
C2 C3 H3 C4 240.0 240.9
C2 C3 H3 O3 120.5 120.6
C4 C3 H3 O3 240.5 239.7
H3 C3 C4 O4 175.5 174.1
H3 C3 C4 C5 296.0 294.0
H3 C3 C4 H4 55.8 53.8
H3 C3 O3 HO3 298.8 59.7
O4 C4 C3 O3 56.3 53.8
O4 C4 C3 H3 175.5 174.1
C3 C4 O4 C5 120.8 119.6
C3 C4 O4 H4 240.5 239.8
C5 C4 O4 H4 119.7 120.2
O4 C4 C5 O5 64.5 58.7
O4 C4 C5 C6 304.6 298.6
O4 C4 C5 H5 185.2 178.8
C5 C4 C3 O3 176.8 173.6
C5 C4 C3 H3 296.0 294.0
C3 C4 C5 O4 239.2 240.1
C3 C4 C5 H4 119.5 119.9
O4 C4 C5 H4 240.2 239.8
C5 C4 O4 HO4 59.3 60.0
C1 O5 C5 C4 60.8 67.6
O5 C5 C4 C6 119.9 120.0
O5 C5 C4 H5 239.3 239.8
C6 C5 C4 H5 119.4 119.8
C4 C5 C6 O6 176.8 180.3
C4 C5 C6 H61 302.1 300.3
C4 C5 C6 H62 51.5 60.3
H4 C4 C3 O3 296.6 293.5
H4 C4 C3 H3 55.8 53.8
C3 C4 H4 O4 120.1 120.2
C3 C4 H4 C5 239.9 240.4
O4 C4 H4 C5 119.8 120.2
H4 C4 O4 HO4 299.5 299.8
H4 C4 C5 O5 184.3 178.9
H4 C4 C5 C6 64.4 58.9
H4 C4 C5 H5 305.0 299.1
O5 C1 C2 N2 180.4 181.1
O5 C1 C2 H2 299.1 301.2
C2 C1 O5 O1 120.4 120.2
C2 C1 O5 H1 240.6 240.0
C4 C5 O5 C1 60.8 67.6
C1 O5 C5 C6 183.4 187.6
C1 O5 C5 H5 302.9 307.5
O1 C1 O5 H1 120.2 119.8
O5 C1 O1 HO1 300.7 300.3
O5 C5 C4 H4 184.3 178.9
C4 C5 O5 C6 237.4 240.0
C4 C5 O5 H5 117.9 120.1
C5 O5 C1 O1 177.5 172.3
C5 O5 C1 H1 57.3 52.5
C6 C5 O5 H5 240.5 240.1
O5 C5 C6 O6 55.5 60.0
O5 C5 C6 H61 180.7 180.0
O5 C5 C6 H62 290.2 300.0
O1 C1 C2 N2 300.2 301.2
O1 C1 C2 H2 58.9 61.3
C2 C1 O1 O5 239.4 239.7
C2 C1 O1 H1 119.4 119.9
O1 C1 O5 C5 177.5 172.3
O5 C1 O1 H1 240.0 240.2
H1 C1 C2 N2 60.4 61.1
H1 C1 C2 H2 179.1 181.2
C2 C1 H1 O5 120.3 120.2
C2 C1 H1 O1 239.9 240.0
H1 C1 O5 C5 57.3 52.5
O5 C1 H1 O1 119.6 119.8
H1 C1 O1 HO1 60.7 60.1
HO1 O1 C1 H1 60.7 60.1
HN21 N2 C2 H2 299.2 299.9
C2 N2 HN21 HN22 234.8 113.8
HN22 N2 C2 H2 173.9 53.7
C2 N2 HN22 HN21 125.1 246.2
HO3 O3 C3 H3 298.8 59.7
HO4 O4 C4 C5 59.3 60.0
HO4 O4 C4 H4 299.5 299.8
C6 C5 C4 H4 64.4 58.9
C4 C5 C6 O5 121.4 120.3
C4 C5 C6 H5 242.2 240.2
O5 C5 C6 H5 120.8 119.9
O6 C6 C5 H61 234.7 240.0
O6 C6 C5 H62 125.3 120.0
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 250.6 240.0
H5 C5 C4 H4 305.0 299.1
C4 C5 H5 O5 239.9 239.6
C4 C5 H5 C6 121.3 119.7
O5 C5 H5 C6 241.4 240.1
H5 C5 C6 O6 294.7 300.1
H5 C5 C6 H61 59.9 60.1
H5 C5 C6 H62 169.3 180.1
O6 C6 C5 H5 294.7 300.1
C5 C6 O6 H61 125.3 120.0
C5 C6 O6 H62 234.7 240.0
H61 C6 O6 H62 109.4 120.0
H61 C6 C5 H5 59.9 60.1
C5 C6 H61 O6 235.0 240.0
C5 C6 H61 H62 117.5 120.0
O6 C6 H61 H62 242.5 240.0
H61 C6 O6 HO6 54.7 60.0
H62 C6 C5 H5 169.3 180.1
C5 C6 H62 O6 125.0 120.1
C5 C6 H62 H61 242.5 240.1
O6 C6 H62 H61 117.5 120.0
H62 C6 O6 HO6 305.3 300.0
HO6 O6 C6 H61 54.7 60.0
HO6 O6 C6 H62 305.3 300.0