PDB Chemical Component 1GN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1GN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C3 |
1.544 |
1.531 |
C2 |
C1 |
1.528 |
1.530 |
C2 |
N2 |
1.451 |
1.469 |
C2 |
H2 |
1.115 |
1.090 |
C3 |
C4 |
1.532 |
1.532 |
C3 |
O3 |
1.421 |
1.429 |
C3 |
H3 |
1.114 |
1.090 |
C4 |
O4 |
1.418 |
1.428 |
C4 |
C5 |
1.525 |
1.531 |
C4 |
H4 |
1.115 |
1.090 |
O5 |
C1 |
1.442 |
1.426 |
O5 |
C5 |
1.452 |
1.424 |
C1 |
O1 |
1.389 |
1.428 |
C1 |
H1 |
1.115 |
1.089 |
O1 |
HO1 |
0.950 |
0.967 |
N2 |
HN21 |
1.019 |
1.008 |
N2 |
HN22 |
1.020 |
1.009 |
O3 |
HO3 |
0.951 |
0.968 |
O4 |
HO4 |
0.950 |
0.967 |
C5 |
C6 |
1.512 |
1.531 |
C5 |
H5 |
1.115 |
1.090 |
C6 |
O6 |
1.418 |
1.428 |
C6 |
H61 |
1.115 |
1.091 |
C6 |
H62 |
1.115 |
1.089 |
O6 |
HO6 |
0.951 |
0.966 |
Bond Angles for 1GN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
C1 |
108.8 |
109.2 |
C3 |
C2 |
N2 |
111.3 |
109.6 |
C3 |
C2 |
H2 |
108.7 |
109.5 |
C2 |
C3 |
C4 |
110.0 |
108.7 |
C2 |
C3 |
O3 |
110.9 |
109.9 |
C2 |
C3 |
H3 |
108.1 |
109.5 |
C1 |
C2 |
N2 |
109.7 |
109.6 |
C1 |
C2 |
H2 |
110.3 |
109.6 |
C2 |
C1 |
O5 |
110.1 |
109.8 |
C2 |
C1 |
O1 |
109.8 |
109.5 |
C2 |
C1 |
H1 |
108.6 |
109.4 |
N2 |
C2 |
H2 |
107.9 |
109.5 |
C2 |
N2 |
HN21 |
111.3 |
106.7 |
C2 |
N2 |
HN22 |
111.5 |
106.7 |
C4 |
C3 |
O3 |
109.3 |
109.6 |
C4 |
C3 |
H3 |
109.7 |
109.6 |
C3 |
C4 |
O4 |
109.9 |
109.5 |
C3 |
C4 |
C5 |
109.9 |
109.0 |
C3 |
C4 |
H4 |
108.9 |
109.6 |
O3 |
C3 |
H3 |
108.8 |
109.6 |
C3 |
O3 |
HO3 |
110.9 |
106.8 |
O4 |
C4 |
C5 |
109.4 |
109.6 |
O4 |
C4 |
H4 |
109.4 |
109.6 |
C4 |
O4 |
HO4 |
109.9 |
106.8 |
C5 |
C4 |
H4 |
109.3 |
109.5 |
C4 |
C5 |
O5 |
110.2 |
109.8 |
C4 |
C5 |
C6 |
112.2 |
109.3 |
C4 |
C5 |
H5 |
106.5 |
109.4 |
C1 |
O5 |
C5 |
112.5 |
107.6 |
O5 |
C1 |
O1 |
108.8 |
109.4 |
O5 |
C1 |
H1 |
109.6 |
109.3 |
O5 |
C5 |
C6 |
107.6 |
109.4 |
O5 |
C5 |
H5 |
111.2 |
109.5 |
O1 |
C1 |
H1 |
109.9 |
109.4 |
C1 |
O1 |
HO1 |
109.8 |
106.9 |
HN21 |
N2 |
HN22 |
111.6 |
106.7 |
C6 |
C5 |
H5 |
109.2 |
109.4 |
C5 |
C6 |
O6 |
111.1 |
109.5 |
C5 |
C6 |
H61 |
111.6 |
109.4 |
C5 |
C6 |
H62 |
111.6 |
109.5 |
O6 |
C6 |
H61 |
111.6 |
109.5 |
O6 |
C6 |
H62 |
111.6 |
109.5 |
C6 |
O6 |
HO6 |
111.1 |
106.8 |
H61 |
C6 |
H62 |
98.7 |
109.5 |
Torsion Angles for 1GN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
N2 |
121.1 |
120.0 |
C1 |
C2 |
C3 |
H2 |
239.8 |
240.0 |
C3 |
C2 |
C1 |
O5 |
58.3 |
61.1 |
C3 |
C2 |
C1 |
O1 |
178.1 |
181.2 |
C3 |
C2 |
C1 |
H1 |
298.3 |
301.1 |
N2 |
C2 |
C3 |
H2 |
118.7 |
120.1 |
C3 |
C2 |
N2 |
HN21 |
180.0 |
179.8 |
C3 |
C2 |
N2 |
HN22 |
54.7 |
293.6 |
C4 |
C3 |
C2 |
O3 |
121.1 |
119.9 |
C4 |
C3 |
C2 |
H3 |
240.3 |
240.3 |
C2 |
C3 |
C4 |
O4 |
294.3 |
293.7 |
C2 |
C3 |
C4 |
C5 |
54.8 |
53.5 |
C2 |
C3 |
C4 |
H4 |
174.6 |
173.4 |
O3 |
C3 |
C2 |
H3 |
119.2 |
120.4 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
299.3 |
C3 |
C2 |
C1 |
N2 |
238.0 |
240.0 |
C3 |
C2 |
C1 |
H2 |
119.3 |
119.9 |
C1 |
C2 |
C3 |
C4 |
304.5 |
306.4 |
C1 |
C2 |
C3 |
O3 |
183.4 |
186.5 |
C1 |
C2 |
C3 |
H3 |
64.2 |
66.1 |
N2 |
C2 |
C1 |
H2 |
241.3 |
239.9 |
C1 |
C2 |
N2 |
HN21 |
59.5 |
60.1 |
C1 |
C2 |
N2 |
HN22 |
294.2 |
173.9 |
C2 |
C1 |
O5 |
C5 |
297.9 |
292.5 |
O5 |
C1 |
C2 |
O1 |
240.2 |
239.9 |
O5 |
C1 |
C2 |
H1 |
120.0 |
120.0 |
O1 |
C1 |
C2 |
H1 |
239.8 |
240.1 |
C2 |
C1 |
O1 |
HO1 |
180.1 |
180.0 |
C3 |
C2 |
N2 |
C1 |
120.5 |
119.7 |
C3 |
C2 |
N2 |
H2 |
240.8 |
239.9 |
N2 |
C2 |
C3 |
C4 |
183.4 |
186.4 |
N2 |
C2 |
C3 |
O3 |
62.4 |
66.6 |
N2 |
C2 |
C3 |
H3 |
303.2 |
306.1 |
C1 |
C2 |
N2 |
H2 |
120.2 |
120.2 |
N2 |
C2 |
C1 |
O5 |
180.4 |
181.1 |
N2 |
C2 |
C1 |
O1 |
300.2 |
301.2 |
N2 |
C2 |
C1 |
H1 |
60.4 |
61.1 |
HN21 |
N2 |
C2 |
HN22 |
125.3 |
246.2 |
C3 |
C2 |
H2 |
C1 |
240.7 |
240.3 |
C3 |
C2 |
H2 |
N2 |
120.9 |
120.1 |
H2 |
C2 |
C3 |
C4 |
64.7 |
66.4 |
H2 |
C2 |
C3 |
O3 |
303.7 |
306.5 |
H2 |
C2 |
C3 |
H3 |
184.5 |
186.0 |
C1 |
C2 |
H2 |
N2 |
240.2 |
239.8 |
H2 |
C2 |
C1 |
O5 |
299.1 |
301.2 |
H2 |
C2 |
C1 |
O1 |
58.9 |
61.3 |
H2 |
C2 |
C1 |
H1 |
179.1 |
181.2 |
H2 |
C2 |
N2 |
HN21 |
299.2 |
299.9 |
H2 |
C2 |
N2 |
HN22 |
173.9 |
53.7 |
C4 |
C3 |
C2 |
C1 |
304.5 |
306.4 |
C4 |
C3 |
C2 |
N2 |
183.4 |
186.4 |
C4 |
C3 |
C2 |
H2 |
64.7 |
66.4 |
C2 |
C3 |
C4 |
O3 |
238.0 |
239.9 |
C2 |
C3 |
C4 |
H3 |
118.8 |
119.6 |
O3 |
C3 |
C4 |
H3 |
240.8 |
239.7 |
C4 |
C3 |
O3 |
HO3 |
58.5 |
180.0 |
O4 |
C4 |
C3 |
C5 |
239.5 |
240.1 |
O4 |
C4 |
C3 |
H4 |
119.8 |
120.2 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
179.6 |
C5 |
C4 |
C3 |
H4 |
240.2 |
240.1 |
C3 |
C4 |
C5 |
O5 |
303.7 |
298.8 |
C3 |
C4 |
C5 |
C6 |
183.9 |
178.7 |
C3 |
C4 |
C5 |
H5 |
64.5 |
59.0 |
O3 |
C3 |
C2 |
C1 |
183.4 |
186.5 |
O3 |
C3 |
C2 |
N2 |
62.4 |
66.6 |
O3 |
C3 |
C2 |
H2 |
303.7 |
306.5 |
C2 |
C3 |
O3 |
C4 |
121.5 |
119.4 |
C2 |
C3 |
O3 |
H3 |
241.2 |
239.7 |
C4 |
C3 |
O3 |
H3 |
119.7 |
120.3 |
O3 |
C3 |
C4 |
O4 |
56.3 |
53.8 |
O3 |
C3 |
C4 |
C5 |
176.8 |
173.6 |
O3 |
C3 |
C4 |
H4 |
296.6 |
293.5 |
H3 |
C3 |
C2 |
C1 |
64.2 |
66.1 |
H3 |
C3 |
C2 |
N2 |
303.2 |
306.1 |
H3 |
C3 |
C2 |
H2 |
184.5 |
186.0 |
C2 |
C3 |
H3 |
C4 |
240.0 |
240.9 |
C2 |
C3 |
H3 |
O3 |
120.5 |
120.6 |
C4 |
C3 |
H3 |
O3 |
240.5 |
239.7 |
H3 |
C3 |
C4 |
O4 |
175.5 |
174.1 |
H3 |
C3 |
C4 |
C5 |
296.0 |
294.0 |
H3 |
C3 |
C4 |
H4 |
55.8 |
53.8 |
H3 |
C3 |
O3 |
HO3 |
298.8 |
59.7 |
O4 |
C4 |
C3 |
O3 |
56.3 |
53.8 |
O4 |
C4 |
C3 |
H3 |
175.5 |
174.1 |
C3 |
C4 |
O4 |
C5 |
120.8 |
119.6 |
C3 |
C4 |
O4 |
H4 |
240.5 |
239.8 |
C5 |
C4 |
O4 |
H4 |
119.7 |
120.2 |
O4 |
C4 |
C5 |
O5 |
64.5 |
58.7 |
O4 |
C4 |
C5 |
C6 |
304.6 |
298.6 |
O4 |
C4 |
C5 |
H5 |
185.2 |
178.8 |
C5 |
C4 |
C3 |
O3 |
176.8 |
173.6 |
C5 |
C4 |
C3 |
H3 |
296.0 |
294.0 |
C3 |
C4 |
C5 |
O4 |
239.2 |
240.1 |
C3 |
C4 |
C5 |
H4 |
119.5 |
119.9 |
O4 |
C4 |
C5 |
H4 |
240.2 |
239.8 |
C5 |
C4 |
O4 |
HO4 |
59.3 |
60.0 |
C1 |
O5 |
C5 |
C4 |
60.8 |
67.6 |
O5 |
C5 |
C4 |
C6 |
119.9 |
120.0 |
O5 |
C5 |
C4 |
H5 |
239.3 |
239.8 |
C6 |
C5 |
C4 |
H5 |
119.4 |
119.8 |
C4 |
C5 |
C6 |
O6 |
176.8 |
180.3 |
C4 |
C5 |
C6 |
H61 |
302.1 |
300.3 |
C4 |
C5 |
C6 |
H62 |
51.5 |
60.3 |
H4 |
C4 |
C3 |
O3 |
296.6 |
293.5 |
H4 |
C4 |
C3 |
H3 |
55.8 |
53.8 |
C3 |
C4 |
H4 |
O4 |
120.1 |
120.2 |
C3 |
C4 |
H4 |
C5 |
239.9 |
240.4 |
O4 |
C4 |
H4 |
C5 |
119.8 |
120.2 |
H4 |
C4 |
O4 |
HO4 |
299.5 |
299.8 |
H4 |
C4 |
C5 |
O5 |
184.3 |
178.9 |
H4 |
C4 |
C5 |
C6 |
64.4 |
58.9 |
H4 |
C4 |
C5 |
H5 |
305.0 |
299.1 |
O5 |
C1 |
C2 |
N2 |
180.4 |
181.1 |
O5 |
C1 |
C2 |
H2 |
299.1 |
301.2 |
C2 |
C1 |
O5 |
O1 |
120.4 |
120.2 |
C2 |
C1 |
O5 |
H1 |
240.6 |
240.0 |
C4 |
C5 |
O5 |
C1 |
60.8 |
67.6 |
C1 |
O5 |
C5 |
C6 |
183.4 |
187.6 |
C1 |
O5 |
C5 |
H5 |
302.9 |
307.5 |
O1 |
C1 |
O5 |
H1 |
120.2 |
119.8 |
O5 |
C1 |
O1 |
HO1 |
300.7 |
300.3 |
O5 |
C5 |
C4 |
H4 |
184.3 |
178.9 |
C4 |
C5 |
O5 |
C6 |
237.4 |
240.0 |
C4 |
C5 |
O5 |
H5 |
117.9 |
120.1 |
C5 |
O5 |
C1 |
O1 |
177.5 |
172.3 |
C5 |
O5 |
C1 |
H1 |
57.3 |
52.5 |
C6 |
C5 |
O5 |
H5 |
240.5 |
240.1 |
O5 |
C5 |
C6 |
O6 |
55.5 |
60.0 |
O5 |
C5 |
C6 |
H61 |
180.7 |
180.0 |
O5 |
C5 |
C6 |
H62 |
290.2 |
300.0 |
O1 |
C1 |
C2 |
N2 |
300.2 |
301.2 |
O1 |
C1 |
C2 |
H2 |
58.9 |
61.3 |
C2 |
C1 |
O1 |
O5 |
239.4 |
239.7 |
C2 |
C1 |
O1 |
H1 |
119.4 |
119.9 |
O1 |
C1 |
O5 |
C5 |
177.5 |
172.3 |
O5 |
C1 |
O1 |
H1 |
240.0 |
240.2 |
H1 |
C1 |
C2 |
N2 |
60.4 |
61.1 |
H1 |
C1 |
C2 |
H2 |
179.1 |
181.2 |
C2 |
C1 |
H1 |
O5 |
120.3 |
120.2 |
C2 |
C1 |
H1 |
O1 |
239.9 |
240.0 |
H1 |
C1 |
O5 |
C5 |
57.3 |
52.5 |
O5 |
C1 |
H1 |
O1 |
119.6 |
119.8 |
H1 |
C1 |
O1 |
HO1 |
60.7 |
60.1 |
HO1 |
O1 |
C1 |
H1 |
60.7 |
60.1 |
HN21 |
N2 |
C2 |
H2 |
299.2 |
299.9 |
C2 |
N2 |
HN21 |
HN22 |
234.8 |
113.8 |
HN22 |
N2 |
C2 |
H2 |
173.9 |
53.7 |
C2 |
N2 |
HN22 |
HN21 |
125.1 |
246.2 |
HO3 |
O3 |
C3 |
H3 |
298.8 |
59.7 |
HO4 |
O4 |
C4 |
C5 |
59.3 |
60.0 |
HO4 |
O4 |
C4 |
H4 |
299.5 |
299.8 |
C6 |
C5 |
C4 |
H4 |
64.4 |
58.9 |
C4 |
C5 |
C6 |
O5 |
121.4 |
120.3 |
C4 |
C5 |
C6 |
H5 |
242.2 |
240.2 |
O5 |
C5 |
C6 |
H5 |
120.8 |
119.9 |
O6 |
C6 |
C5 |
H61 |
234.7 |
240.0 |
O6 |
C6 |
C5 |
H62 |
125.3 |
120.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
250.6 |
240.0 |
H5 |
C5 |
C4 |
H4 |
305.0 |
299.1 |
C4 |
C5 |
H5 |
O5 |
239.9 |
239.6 |
C4 |
C5 |
H5 |
C6 |
121.3 |
119.7 |
O5 |
C5 |
H5 |
C6 |
241.4 |
240.1 |
H5 |
C5 |
C6 |
O6 |
294.7 |
300.1 |
H5 |
C5 |
C6 |
H61 |
59.9 |
60.1 |
H5 |
C5 |
C6 |
H62 |
169.3 |
180.1 |
O6 |
C6 |
C5 |
H5 |
294.7 |
300.1 |
C5 |
C6 |
O6 |
H61 |
125.3 |
120.0 |
C5 |
C6 |
O6 |
H62 |
234.7 |
240.0 |
H61 |
C6 |
O6 |
H62 |
109.4 |
120.0 |
H61 |
C6 |
C5 |
H5 |
59.9 |
60.1 |
C5 |
C6 |
H61 |
O6 |
235.0 |
240.0 |
C5 |
C6 |
H61 |
H62 |
117.5 |
120.0 |
O6 |
C6 |
H61 |
H62 |
242.5 |
240.0 |
H61 |
C6 |
O6 |
HO6 |
54.7 |
60.0 |
H62 |
C6 |
C5 |
H5 |
169.3 |
180.1 |
C5 |
C6 |
H62 |
O6 |
125.0 |
120.1 |
C5 |
C6 |
H62 |
H61 |
242.5 |
240.1 |
O6 |
C6 |
H62 |
H61 |
117.5 |
120.0 |
H62 |
C6 |
O6 |
HO6 |
305.3 |
300.0 |
HO6 |
O6 |
C6 |
H61 |
54.7 |
60.0 |
HO6 |
O6 |
C6 |
H62 |
305.3 |
300.0 |