PDB Chemical Component 1GM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1GM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O01 |
C14 |
1.354 |
1.359 |
| C14 |
C15 |
1.411 |
1.387 |
| C14 |
C13 |
1.411 |
1.390 |
| C15 |
C16 |
1.402 |
1.383 |
| C13 |
C12 |
1.410 |
1.378 |
| C16 |
O02 |
1.356 |
1.359 |
| C16 |
C11 |
1.416 |
1.402 |
| C12 |
C11 |
1.416 |
1.397 |
| C11 |
C10 |
1.350 |
1.475 |
| C01 |
C02 |
1.527 |
1.530 |
| C10 |
N01 |
1.343 |
1.349 |
| C10 |
C09 |
1.336 |
1.397 |
| C02 |
N01 |
1.491 |
1.465 |
| N01 |
N02 |
1.142 |
1.400 |
| C08 |
C09 |
1.357 |
1.406 |
| C08 |
C07 |
1.408 |
1.358 |
| C09 |
C03 |
1.349 |
1.470 |
| N02 |
C03 |
1.337 |
1.322 |
| C07 |
C06 |
1.404 |
1.396 |
| C03 |
C04 |
1.373 |
1.411 |
| C06 |
C04 |
1.422 |
1.357 |
| C04 |
C05 |
1.420 |
1.507 |
| F01 |
C05 |
1.339 |
1.400 |
| C05 |
F02 |
1.340 |
1.399 |
| C05 |
F03 |
1.348 |
1.399 |
| C01 |
H1 |
1.100 |
1.090 |
| C01 |
H2 |
1.100 |
1.089 |
| C01 |
H3 |
1.100 |
1.090 |
| C02 |
H4 |
1.100 |
1.090 |
| C02 |
H5 |
1.101 |
1.090 |
| C06 |
H6 |
1.080 |
1.080 |
| C07 |
H7 |
1.080 |
1.080 |
| C08 |
H8 |
1.080 |
1.081 |
| C12 |
H9 |
1.080 |
1.080 |
| C13 |
H10 |
1.080 |
1.080 |
| O01 |
H11 |
0.950 |
0.967 |
| C15 |
H12 |
1.080 |
1.081 |
| O02 |
H13 |
0.950 |
0.968 |
Bond Angles for 1GM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O01 |
C14 |
C15 |
119.8 |
119.8 |
| C14 |
C15 |
C16 |
119.0 |
120.1 |
| C14 |
C15 |
H12 |
120.5 |
120.0 |
| C14 |
C13 |
H10 |
119.7 |
119.9 |
| C15 |
C16 |
O02 |
119.9 |
120.2 |
| C16 |
C15 |
H12 |
120.5 |
119.9 |
| C13 |
C12 |
H9 |
120.6 |
120.0 |
| C16 |
O02 |
H13 |
109.5 |
114.0 |
| C01 |
C02 |
N01 |
112.6 |
109.4 |
| C02 |
C01 |
H1 |
109.5 |
109.5 |
| C02 |
C01 |
H2 |
109.5 |
109.5 |
| C02 |
C01 |
H3 |
109.4 |
109.4 |
| C01 |
C02 |
H4 |
108.7 |
109.5 |
| C01 |
C02 |
H5 |
108.7 |
109.4 |
| C02 |
N01 |
N02 |
121.7 |
125.1 |
| N01 |
C02 |
H4 |
108.7 |
109.5 |
| N01 |
C02 |
H5 |
108.7 |
109.5 |
| N01 |
N02 |
C03 |
114.3 |
109.3 |
| C09 |
C08 |
H8 |
120.2 |
120.2 |
| C08 |
C07 |
H7 |
120.6 |
119.1 |
| N02 |
C03 |
C04 |
133.1 |
134.5 |
| C07 |
C06 |
H6 |
120.0 |
119.1 |
| C03 |
C04 |
C05 |
121.3 |
120.2 |
| C04 |
C05 |
F02 |
112.3 |
109.5 |
| C04 |
C05 |
F03 |
114.6 |
109.5 |
| F01 |
C05 |
F02 |
108.3 |
109.5 |
| F01 |
C05 |
F03 |
106.7 |
109.4 |
| F02 |
C05 |
F03 |
105.2 |
109.5 |
| H1 |
C01 |
H2 |
109.4 |
109.4 |
| H1 |
C01 |
H3 |
109.5 |
109.5 |
| H2 |
C01 |
H3 |
109.5 |
109.5 |
| H4 |
C02 |
H5 |
109.5 |
109.5 |
Torsion Angles for 1GM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O01 |
C14 |
C15 |
C16 |
180.1 |
180.0 |
| O01 |
C14 |
C15 |
H12 |
0.1 |
0.1 |
| O01 |
C14 |
C13 |
H10 |
0.1 |
359.8 |
| C15 |
C14 |
C13 |
H10 |
180.2 |
180.0 |
| C14 |
C15 |
C16 |
O02 |
180.0 |
179.9 |
| C16 |
C15 |
C14 |
H12 |
180.0 |
179.9 |
| C14 |
C13 |
C12 |
H9 |
179.8 |
180.1 |
| C14 |
C15 |
C16 |
H12 |
180.0 |
180.1 |
| C15 |
C16 |
O02 |
H13 |
180.0 |
90.0 |
| O02 |
C16 |
C15 |
H12 |
360.0 |
359.8 |
| C01 |
C02 |
N01 |
N02 |
66.1 |
90.1 |
| N01 |
C02 |
C01 |
H4 |
239.5 |
240.0 |
| N01 |
C02 |
C01 |
H5 |
120.5 |
119.9 |
| H1 |
C01 |
C02 |
H2 |
240.0 |
240.0 |
| H1 |
C01 |
C02 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
H3 |
240.0 |
240.0 |
| H4 |
C02 |
C01 |
H5 |
240.9 |
239.9 |
| C10 |
N01 |
C02 |
H4 |
125.8 |
149.7 |
| C10 |
N01 |
C02 |
H5 |
6.7 |
29.7 |
| C10 |
C09 |
C08 |
H8 |
359.8 |
0.2 |
| N01 |
C02 |
C01 |
H1 |
180.0 |
300.0 |
| N01 |
C02 |
C01 |
H2 |
300.0 |
60.0 |
| N01 |
C02 |
C01 |
H3 |
60.0 |
180.0 |
| C01 |
C02 |
N01 |
H4 |
120.5 |
120.0 |
| C01 |
C02 |
N01 |
H5 |
239.5 |
240.1 |
| C02 |
N01 |
N02 |
C03 |
180.0 |
180.0 |
| H4 |
C02 |
N01 |
H5 |
119.1 |
120.1 |
| N02 |
N01 |
C02 |
H4 |
305.6 |
330.1 |
| N02 |
N01 |
C02 |
H5 |
186.5 |
210.0 |
| N01 |
N02 |
C03 |
C04 |
179.9 |
180.0 |
| C09 |
C08 |
C07 |
H7 |
180.0 |
180.0 |
| C08 |
C07 |
C06 |
H6 |
180.1 |
180.0 |
| N02 |
C03 |
C04 |
C05 |
359.9 |
360.0 |
| C03 |
C04 |
C05 |
F02 |
47.2 |
180.0 |
| C03 |
C04 |
C05 |
F03 |
167.1 |
300.0 |
| F01 |
C05 |
C04 |
F02 |
239.8 |
240.0 |
| F01 |
C05 |
C04 |
F03 |
119.8 |
120.0 |
| F02 |
C05 |
C04 |
F03 |
240.1 |
240.0 |
| C04 |
C05 |
F01 |
F02 |
122.7 |
120.0 |
| C04 |
C05 |
F01 |
F03 |
235.4 |
240.0 |
| F02 |
C05 |
F01 |
F03 |
112.8 |
120.0 |
| C04 |
C05 |
F02 |
F03 |
125.3 |
120.0 |
| F01 |
C05 |
F02 |
F03 |
246.2 |
240.1 |
| C04 |
C05 |
F03 |
F02 |
236.2 |
240.0 |
| F01 |
C05 |
F03 |
F02 |
114.9 |
120.0 |
| H1 |
C01 |
C02 |
N01 |
180.0 |
300.0 |
| C02 |
C01 |
H1 |
H2 |
120.0 |
120.0 |
| C02 |
C01 |
H1 |
H3 |
240.0 |
240.0 |
| H1 |
C01 |
C02 |
H4 |
300.5 |
60.0 |
| H1 |
C01 |
C02 |
H5 |
59.6 |
180.0 |
| H2 |
C01 |
H1 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
N01 |
300.0 |
60.0 |
| C02 |
C01 |
H2 |
H1 |
240.0 |
240.0 |
| C02 |
C01 |
H2 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
H4 |
60.5 |
180.0 |
| H2 |
C01 |
C02 |
H5 |
179.5 |
300.0 |
| H1 |
C01 |
H2 |
H3 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
N01 |
60.0 |
180.0 |
| C02 |
C01 |
H3 |
H1 |
120.0 |
120.0 |
| C02 |
C01 |
H3 |
H2 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
H4 |
180.5 |
300.0 |
| H3 |
C01 |
C02 |
H5 |
299.6 |
60.0 |
| H1 |
C01 |
H3 |
H2 |
120.0 |
120.0 |
| C01 |
C02 |
H4 |
N01 |
237.2 |
240.0 |
| H4 |
C02 |
C01 |
H1 |
300.5 |
60.0 |
| H4 |
C02 |
C01 |
H2 |
60.5 |
180.0 |
| H4 |
C02 |
C01 |
H3 |
180.5 |
300.0 |
| C01 |
C02 |
H4 |
H5 |
118.6 |
120.0 |
| H4 |
C02 |
N01 |
N02 |
305.6 |
330.1 |
| N01 |
C02 |
H4 |
H5 |
241.4 |
240.0 |
| C01 |
C02 |
H5 |
N01 |
122.8 |
119.9 |
| H5 |
C02 |
C01 |
H1 |
59.6 |
180.0 |
| H5 |
C02 |
C01 |
H2 |
179.5 |
300.0 |
| H5 |
C02 |
C01 |
H3 |
299.6 |
60.0 |
| C01 |
C02 |
H5 |
H4 |
241.4 |
240.0 |
| H5 |
C02 |
N01 |
N02 |
186.5 |
210.0 |
| N01 |
C02 |
H5 |
H4 |
118.6 |
120.0 |
| H7 |
C07 |
C06 |
H6 |
0.1 |
0.0 |
| H8 |
C08 |
C07 |
H7 |
360.0 |
360.0 |
| H10 |
C13 |
C12 |
H9 |
359.8 |
0.1 |
| H11 |
O01 |
C14 |
C15 |
180.0 |
90.1 |
| C14 |
C15 |
H12 |
C16 |
180.0 |
179.9 |
| H12 |
C15 |
C16 |
O02 |
360.0 |
359.8 |