PDB Chemical Component 1FD
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1FD
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| F2 |
C1 |
1.326 |
1.399 |
| F1 |
C1 |
1.327 |
1.399 |
| C1 |
O |
1.378 |
1.429 |
| C1 |
F3 |
1.326 |
1.399 |
| O |
C2 |
1.375 |
1.360 |
| C2 |
C3 |
1.386 |
1.387 |
| C2 |
C7 |
1.389 |
1.387 |
| C3 |
C4 |
1.388 |
1.382 |
| C7 |
C6 |
1.387 |
1.381 |
| C4 |
C5 |
1.387 |
1.382 |
| C6 |
C5 |
1.390 |
1.383 |
| C5 |
C8 |
1.493 |
1.507 |
| C8 |
N |
1.440 |
1.469 |
| C7 |
H1 |
1.080 |
1.081 |
| C6 |
H2 |
1.080 |
1.080 |
| C8 |
H3 |
1.101 |
1.089 |
| C8 |
H4 |
1.100 |
1.091 |
| N |
H5 |
1.000 |
1.009 |
| N |
H6 |
1.000 |
1.009 |
| C4 |
H8 |
1.080 |
1.080 |
| C3 |
H9 |
1.080 |
1.080 |
Bond Angles for 1FD
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| F2 |
C1 |
O |
109.2 |
109.5 |
| F1 |
C1 |
O |
108.8 |
109.4 |
| C1 |
O |
C2 |
122.3 |
117.0 |
| O |
C2 |
C3 |
119.2 |
120.0 |
| O |
C2 |
C7 |
120.7 |
120.0 |
| C7 |
C2 |
C3 |
120.0 |
119.9 |
| C2 |
C3 |
C4 |
119.9 |
119.9 |
| C2 |
C3 |
H9 |
120.1 |
120.0 |
| C2 |
C7 |
C6 |
120.2 |
120.0 |
| C2 |
C7 |
H1 |
119.9 |
120.0 |
| C3 |
C4 |
H8 |
119.9 |
119.9 |
| C7 |
C6 |
C5 |
119.7 |
120.0 |
| C6 |
C7 |
H1 |
119.9 |
120.0 |
| C7 |
C6 |
H2 |
120.1 |
120.0 |
| C6 |
C5 |
C8 |
120.3 |
120.0 |
| C5 |
C6 |
H2 |
120.1 |
120.0 |
| C5 |
C8 |
N |
116.1 |
109.5 |
| C5 |
C8 |
H3 |
107.8 |
109.5 |
| C5 |
C8 |
H4 |
107.8 |
109.4 |
| N |
C8 |
H3 |
107.8 |
109.5 |
| N |
C8 |
H4 |
107.8 |
109.5 |
| C8 |
N |
H5 |
109.5 |
111.0 |
| C8 |
N |
H6 |
109.4 |
111.0 |
| H3 |
C8 |
H4 |
109.4 |
109.5 |
| H5 |
N |
H6 |
109.5 |
111.0 |
Torsion Angles for 1FD
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| F1 |
C1 |
F2 |
O |
240.9 |
240.0 |
| F2 |
C1 |
O |
C2 |
106.6 |
180.0 |
| F2 |
C1 |
F1 |
O |
119.4 |
120.0 |
| F1 |
C1 |
O |
C2 |
226.4 |
300.0 |
| C1 |
O |
C2 |
C3 |
256.7 |
180.0 |
| C1 |
O |
C2 |
C7 |
77.6 |
0.3 |
| C7 |
C2 |
O |
C3 |
180.9 |
180.3 |
| O |
C2 |
C3 |
C4 |
180.4 |
179.8 |
| O |
C2 |
C3 |
H9 |
0.4 |
0.1 |
| O |
C2 |
C7 |
C6 |
179.9 |
180.0 |
| O |
C2 |
C7 |
H1 |
359.9 |
359.9 |
| O |
C2 |
C3 |
C7 |
180.9 |
180.3 |
| C3 |
C2 |
C7 |
C6 |
0.8 |
0.3 |
| C3 |
C2 |
C7 |
H1 |
180.8 |
180.2 |
| C2 |
C3 |
C4 |
H8 |
180.1 |
180.2 |
| O |
C2 |
C7 |
C3 |
179.1 |
179.7 |
| C7 |
C2 |
C3 |
C4 |
359.5 |
359.4 |
| C7 |
C2 |
C3 |
H9 |
179.5 |
179.7 |
| C2 |
C7 |
C6 |
C5 |
359.4 |
360.0 |
| C6 |
C7 |
C2 |
H1 |
180.0 |
180.1 |
| C2 |
C7 |
C6 |
H2 |
179.4 |
180.0 |
| C2 |
C3 |
C4 |
H9 |
180.0 |
180.3 |
| C6 |
C7 |
C2 |
C3 |
0.8 |
0.3 |
| C2 |
C7 |
C6 |
H1 |
180.0 |
179.9 |
| C7 |
C6 |
C5 |
C8 |
179.7 |
180.0 |
| C5 |
C6 |
C7 |
H2 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
C5 |
0.1 |
0.6 |
| C4 |
C5 |
C6 |
H2 |
180.2 |
180.0 |
| C4 |
C5 |
C8 |
H3 |
211.5 |
30.0 |
| C4 |
C5 |
C8 |
H4 |
329.5 |
150.0 |
| C5 |
C6 |
C7 |
H1 |
179.4 |
180.1 |
| C7 |
C6 |
C5 |
H2 |
180.0 |
180.0 |
| C6 |
C5 |
C8 |
N |
271.0 |
90.0 |
| C6 |
C5 |
C8 |
H3 |
31.9 |
210.0 |
| C6 |
C5 |
C8 |
H4 |
150.0 |
330.0 |
| C8 |
C5 |
C6 |
H2 |
359.7 |
360.0 |
| N |
C8 |
C5 |
H3 |
239.0 |
240.0 |
| N |
C8 |
C5 |
H4 |
121.0 |
120.0 |
| C5 |
C8 |
N |
H5 |
180.0 |
180.0 |
| C5 |
C8 |
N |
H6 |
300.0 |
304.0 |
| H3 |
C8 |
C5 |
H4 |
242.0 |
240.0 |
| C5 |
C8 |
N |
H3 |
121.0 |
120.0 |
| C5 |
C8 |
N |
H4 |
239.0 |
240.0 |
| H3 |
C8 |
N |
H4 |
118.1 |
120.0 |
| H5 |
N |
C8 |
H6 |
240.0 |
236.1 |
| H1 |
C7 |
C2 |
C3 |
180.8 |
180.2 |
| C2 |
C7 |
H1 |
C6 |
180.0 |
180.1 |
| H1 |
C7 |
C6 |
C5 |
179.4 |
180.1 |
| H1 |
C7 |
C6 |
H2 |
359.4 |
0.1 |
| C7 |
C6 |
H2 |
C5 |
180.0 |
180.0 |
| H2 |
C6 |
C7 |
H1 |
359.4 |
0.1 |
| H2 |
C6 |
C5 |
C8 |
359.7 |
360.0 |
| C5 |
C8 |
H3 |
N |
234.0 |
240.0 |
| C5 |
C8 |
H3 |
H4 |
117.0 |
120.0 |
| N |
C8 |
H3 |
H4 |
243.0 |
240.0 |
| H3 |
C8 |
N |
H5 |
59.0 |
60.0 |
| H3 |
C8 |
N |
H6 |
179.0 |
183.9 |
| C5 |
C8 |
H4 |
N |
126.0 |
120.0 |
| C5 |
C8 |
H4 |
H3 |
243.0 |
240.0 |
| N |
C8 |
H4 |
H3 |
117.0 |
120.0 |
| H4 |
C8 |
N |
H5 |
301.0 |
300.0 |
| H4 |
C8 |
N |
H6 |
61.0 |
63.9 |
| H5 |
N |
C8 |
H3 |
59.0 |
60.0 |
| H5 |
N |
C8 |
H4 |
301.0 |
300.0 |
| C8 |
N |
H5 |
H6 |
120.0 |
123.9 |
| H6 |
N |
C8 |
H3 |
179.0 |
183.9 |
| H6 |
N |
C8 |
H4 |
61.0 |
63.9 |
| C8 |
N |
H6 |
H5 |
240.0 |
236.1 |
| C2 |
C3 |
H9 |
C4 |
180.0 |
179.7 |
| H9 |
C3 |
C4 |
H8 |
0.1 |
359.9 |