PDB Chemical Component 1FC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1FC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O3' |
C3' |
1.431 |
1.428 |
C3' |
C4' |
1.521 |
1.545 |
C3' |
C2' |
1.547 |
1.546 |
C4' |
C5' |
1.525 |
1.530 |
C4' |
O4' |
1.427 |
1.444 |
C2' |
C1' |
1.527 |
1.546 |
C2' |
F24 |
1.381 |
1.399 |
C5' |
O5' |
1.422 |
1.429 |
C1' |
O4' |
1.428 |
1.444 |
C1' |
N1 |
1.476 |
1.465 |
O2 |
C2 |
1.250 |
1.219 |
O5' |
P |
1.693 |
1.611 |
C2 |
N1 |
1.401 |
1.343 |
C2 |
N3 |
1.349 |
1.332 |
N1 |
C6 |
1.344 |
1.350 |
N3 |
C4 |
1.340 |
1.326 |
P |
OP2 |
1.638 |
1.609 |
P |
OP1 |
1.625 |
1.480 |
C6 |
C5 |
1.398 |
1.384 |
C4 |
C5 |
1.395 |
1.468 |
C4 |
N4 |
1.346 |
1.371 |
C5 |
C21 |
1.525 |
1.471 |
C21 |
O22 |
1.257 |
1.216 |
C21 |
O23 |
1.257 |
1.348 |
C2' |
H1 |
1.100 |
1.090 |
C3' |
H2 |
1.100 |
1.089 |
O3' |
H3 |
0.950 |
0.968 |
C4' |
H4 |
1.100 |
1.091 |
C5' |
H5 |
1.100 |
1.090 |
C5' |
H6 |
1.100 |
1.091 |
OP2 |
H7 |
0.950 |
0.967 |
C1' |
H9 |
1.100 |
1.090 |
C6 |
H10 |
1.080 |
1.080 |
O23 |
H11 |
0.950 |
0.966 |
N4 |
H12 |
1.000 |
0.970 |
N4 |
H13 |
1.000 |
0.970 |
P |
OP3 |
|
1.610 |
OP3 |
H8 |
|
0.966 |
Bond Angles for 1FC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O3' |
C3' |
C4' |
102.0 |
110.5 |
O3' |
C3' |
H2 |
111.2 |
110.6 |
C3' |
C4' |
C5' |
110.6 |
110.4 |
C3' |
C4' |
O4' |
106.6 |
104.8 |
C4' |
C3' |
H2 |
109.9 |
110.5 |
C3' |
C4' |
H4 |
109.1 |
110.4 |
C3' |
C2' |
C1' |
102.4 |
104.0 |
C3' |
C2' |
H1 |
107.6 |
110.6 |
C5' |
C4' |
O4' |
111.0 |
110.4 |
C4' |
C5' |
O5' |
110.6 |
109.5 |
C5' |
C4' |
H4 |
109.1 |
110.3 |
C4' |
C5' |
H5 |
109.2 |
109.5 |
C4' |
C5' |
H6 |
109.2 |
109.5 |
C4' |
O4' |
C1' |
108.8 |
105.3 |
O4' |
C4' |
H4 |
110.4 |
110.4 |
C2' |
C1' |
O4' |
109.5 |
104.8 |
C2' |
C1' |
N1 |
124.7 |
110.3 |
C1' |
C2' |
H1 |
107.9 |
110.5 |
C2' |
C1' |
H9 |
102.0 |
110.4 |
C5' |
O5' |
P |
122.9 |
123.0 |
O5' |
C5' |
H5 |
109.2 |
109.5 |
O5' |
C5' |
H6 |
109.2 |
109.4 |
O4' |
C1' |
N1 |
112.3 |
110.3 |
O4' |
C1' |
H9 |
102.8 |
110.4 |
C1' |
N1 |
C6 |
121.3 |
119.3 |
N1 |
C1' |
H9 |
102.3 |
110.4 |
O5' |
P |
OP2 |
112.8 |
109.4 |
O5' |
P |
OP1 |
119.8 |
109.4 |
O5' |
P |
OP3 |
|
109.5 |
N1 |
C6 |
C5 |
121.9 |
118.9 |
N1 |
C6 |
H10 |
119.1 |
120.5 |
OP2 |
P |
OP1 |
112.1 |
109.5 |
P |
OP2 |
H7 |
109.5 |
114.0 |
OP2 |
P |
OP3 |
|
109.5 |
OP1 |
P |
OP3 |
|
109.5 |
C6 |
C5 |
C21 |
118.7 |
121.0 |
C5 |
C6 |
H10 |
119.0 |
120.6 |
C4 |
N4 |
H12 |
120.0 |
120.0 |
C4 |
N4 |
H13 |
120.0 |
120.0 |
C5 |
C21 |
O22 |
118.1 |
120.0 |
C5 |
C21 |
O23 |
122.2 |
120.0 |
O23 |
C21 |
O22 |
119.7 |
120.0 |
C21 |
O23 |
H11 |
109.5 |
117.0 |
H5 |
C5' |
H6 |
109.5 |
109.5 |
H12 |
N4 |
H13 |
120.0 |
120.0 |
P |
OP3 |
H8 |
|
114.0 |
Torsion Angles for 1FC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O3' |
C3' |
C4' |
C5' |
101.1 |
98.6 |
O3' |
C3' |
C4' |
O4' |
221.8 |
217.4 |
C4' |
C3' |
O3' |
H2 |
242.8 |
237.3 |
O3' |
C3' |
C4' |
H4 |
341.1 |
336.3 |
O3' |
C3' |
C2' |
C1' |
115.0 |
118.6 |
O3' |
C3' |
C2' |
H1 |
1.4 |
360.0 |
O3' |
C3' |
C4' |
H2 |
118.1 |
122.8 |
C4' |
C3' |
C2' |
C1' |
1.5 |
360.0 |
C4' |
C3' |
C2' |
H1 |
248.0 |
241.3 |
C5' |
C4' |
C3' |
O4' |
239.3 |
241.1 |
C3' |
C4' |
C5' |
O5' |
144.9 |
185.0 |
C5' |
C4' |
C3' |
H4 |
120.0 |
122.2 |
C3' |
C4' |
C5' |
H5 |
265.1 |
305.0 |
C3' |
C4' |
C5' |
H6 |
24.8 |
65.0 |
C3' |
C4' |
O4' |
C1' |
23.9 |
40.5 |
O4' |
C4' |
C3' |
H4 |
240.7 |
241.1 |
C3' |
C2' |
C1' |
O4' |
12.9 |
24.0 |
C3' |
C2' |
C1' |
N1 |
150.2 |
142.8 |
C1' |
C2' |
C3' |
H1 |
113.5 |
118.6 |
C3' |
C2' |
C1' |
H9 |
264.5 |
265.1 |
C3' |
C4' |
C5' |
O4' |
118.0 |
115.4 |
C5' |
C4' |
C3' |
H2 |
343.0 |
335.8 |
C3' |
C4' |
C5' |
H4 |
240.0 |
237.7 |
C5' |
C4' |
O4' |
C1' |
144.3 |
159.4 |
O4' |
C4' |
C5' |
H4 |
121.9 |
122.3 |
C4' |
C5' |
O5' |
P |
210.9 |
180.0 |
O5' |
C5' |
C4' |
H5 |
239.8 |
240.0 |
O5' |
C5' |
C4' |
H6 |
120.2 |
120.0 |
H5 |
C5' |
C4' |
H6 |
240.3 |
240.0 |
C3' |
C4' |
O4' |
C5' |
239.6 |
241.2 |
O4' |
C4' |
C3' |
H2 |
103.7 |
94.7 |
C3' |
C4' |
O4' |
H4 |
118.4 |
118.9 |
O4' |
C4' |
C5' |
O5' |
26.9 |
69.6 |
C5' |
C4' |
O4' |
H4 |
238.9 |
237.8 |
O4' |
C4' |
C5' |
H5 |
147.0 |
189.6 |
O4' |
C4' |
C5' |
H6 |
266.7 |
309.6 |
C2' |
C1' |
O4' |
C4' |
336.4 |
319.5 |
C4' |
O4' |
C1' |
N1 |
193.5 |
200.7 |
C4' |
O4' |
C1' |
H9 |
84.2 |
78.3 |
C3' |
C2' |
C1' |
H1 |
246.7 |
241.3 |
C4' |
O4' |
C1' |
C2' |
336.4 |
319.5 |
O4' |
C1' |
C2' |
N1 |
222.7 |
241.2 |
O4' |
C1' |
C2' |
H9 |
108.4 |
118.9 |
C2' |
C1' |
N1 |
C6 |
230.4 |
115.0 |
N1 |
C1' |
C2' |
H9 |
245.7 |
237.7 |
O5' |
C5' |
C4' |
O4' |
26.9 |
69.6 |
O5' |
C5' |
C4' |
H4 |
265.0 |
307.3 |
C4' |
C5' |
O5' |
H5 |
120.2 |
120.0 |
C4' |
C5' |
O5' |
H6 |
239.8 |
240.0 |
C5' |
O5' |
P |
OP2 |
212.2 |
295.0 |
C5' |
O5' |
P |
OP1 |
76.8 |
55.0 |
C5' |
O5' |
P |
OP3 |
|
175.0 |
H5 |
C5' |
O5' |
H6 |
119.7 |
120.0 |
C1' |
O4' |
C4' |
H4 |
265.5 |
281.6 |
C2' |
C1' |
O4' |
N1 |
142.9 |
118.8 |
O4' |
C1' |
C2' |
H1 |
126.2 |
142.8 |
C2' |
C1' |
O4' |
H9 |
252.2 |
241.1 |
O4' |
C1' |
N1 |
C6 |
6.7 |
230.3 |
N1 |
C1' |
O4' |
H9 |
109.3 |
122.4 |
C2' |
C1' |
N1 |
O4' |
223.7 |
244.6 |
N1 |
C1' |
C2' |
H1 |
263.5 |
261.5 |
C2' |
C1' |
N1 |
H9 |
114.2 |
122.3 |
O4' |
C1' |
N1 |
H9 |
250.4 |
237.6 |
C1' |
N1 |
C6 |
C5 |
184.6 |
180.0 |
C1' |
N1 |
C6 |
H10 |
4.6 |
0.0 |
P |
O5' |
C5' |
H5 |
90.8 |
60.0 |
P |
O5' |
C5' |
H6 |
331.1 |
300.0 |
OP2 |
P |
O5' |
OP1 |
135.4 |
240.0 |
O5' |
P |
OP2 |
H7 |
221.1 |
300.0 |
OP2 |
P |
O5' |
OP3 |
|
120.0 |
OP1 |
P |
O5' |
OP3 |
|
240.0 |
O5' |
P |
OP3 |
H8 |
|
180.0 |
C2 |
N1 |
C1' |
H9 |
305.0 |
172.5 |
C2 |
N1 |
C6 |
H10 |
175.9 |
180.3 |
C6 |
N1 |
C1' |
H9 |
116.2 |
352.7 |
N1 |
C6 |
C5 |
C21 |
182.1 |
180.0 |
C5 |
C6 |
N1 |
H10 |
180.0 |
179.9 |
N3 |
C4 |
N4 |
H12 |
360.0 |
185.4 |
N3 |
C4 |
N4 |
H13 |
180.0 |
5.4 |
O5' |
P |
OP2 |
OP1 |
221.1 |
120.0 |
O5' |
P |
OP2 |
OP3 |
|
240.0 |
OP1 |
P |
OP2 |
OP3 |
|
120.0 |
OP2 |
P |
OP3 |
H8 |
|
60.0 |
O5' |
P |
OP1 |
OP2 |
135.7 |
240.0 |
O5' |
P |
OP1 |
OP3 |
|
120.0 |
OP1 |
P |
OP2 |
H7 |
360.0 |
180.0 |
OP2 |
P |
OP1 |
OP3 |
|
239.9 |
OP1 |
P |
OP3 |
H8 |
|
299.9 |
N1 |
C6 |
C5 |
H10 |
180.0 |
180.1 |
C6 |
C5 |
C21 |
O22 |
16.8 |
354.4 |
C6 |
C5 |
C21 |
O23 |
196.8 |
174.3 |
C4 |
C5 |
C6 |
H10 |
182.6 |
180.0 |
H12 |
N4 |
C4 |
H13 |
180.0 |
180.0 |
C21 |
C5 |
C6 |
H10 |
2.1 |
360.0 |
O23 |
C21 |
C5 |
O22 |
180.0 |
179.9 |
C5 |
C21 |
O23 |
H11 |
179.9 |
180.0 |
C5 |
C21 |
O22 |
O23 |
180.0 |
179.9 |
O22 |
C21 |
O23 |
H11 |
360.0 |
360.0 |
C5 |
C21 |
O23 |
O22 |
180.0 |
180.1 |
C3' |
C2' |
H1 |
C1' |
109.8 |
114.6 |
H1 |
C2' |
C1' |
O4' |
126.2 |
142.8 |
H1 |
C2' |
C1' |
N1 |
263.5 |
261.5 |
H1 |
C2' |
C1' |
H9 |
17.8 |
23.8 |
O3' |
C3' |
H2 |
C4' |
247.7 |
237.3 |
H2 |
C3' |
C4' |
C5' |
343.0 |
335.8 |
H2 |
C3' |
C4' |
O4' |
103.7 |
94.7 |
H2 |
C3' |
C4' |
H4 |
223.0 |
213.6 |
H2 |
C3' |
C2' |
C1' |
242.3 |
241.4 |
H2 |
C3' |
C2' |
H1 |
128.8 |
122.7 |
H3 |
O3' |
C3' |
C4' |
180.0 |
180.0 |
H3 |
O3' |
C3' |
H2 |
297.2 |
302.7 |
C3' |
C4' |
H4 |
C5' |
120.9 |
122.2 |
C3' |
C4' |
H4 |
O4' |
243.2 |
244.5 |
H4 |
C4' |
C3' |
H2 |
223.0 |
213.6 |
C5' |
C4' |
H4 |
O4' |
122.2 |
122.3 |
H4 |
C4' |
C5' |
O5' |
265.0 |
307.3 |
H4 |
C4' |
C5' |
H5 |
25.1 |
67.3 |
H4 |
C4' |
C5' |
H6 |
144.8 |
187.3 |
H4 |
C4' |
O4' |
C1' |
265.5 |
281.6 |
H5 |
C5' |
C4' |
O4' |
147.0 |
189.6 |
C4' |
C5' |
H5 |
O5' |
238.9 |
240.0 |
H5 |
C5' |
C4' |
H4 |
25.1 |
67.3 |
C4' |
C5' |
H5 |
H6 |
119.5 |
120.0 |
H5 |
C5' |
O5' |
P |
90.8 |
60.0 |
O5' |
C5' |
H5 |
H6 |
240.5 |
240.1 |
H6 |
C5' |
C4' |
O4' |
266.7 |
309.6 |
C4' |
C5' |
H6 |
O5' |
121.1 |
120.0 |
H6 |
C5' |
C4' |
H4 |
144.8 |
187.3 |
C4' |
C5' |
H6 |
H5 |
240.5 |
240.0 |
H6 |
C5' |
O5' |
P |
331.1 |
300.0 |
O5' |
C5' |
H6 |
H5 |
119.5 |
120.0 |
H7 |
OP2 |
P |
OP1 |
360.0 |
180.0 |
H7 |
OP2 |
P |
OP3 |
|
60.0 |
C2' |
C1' |
H9 |
O4' |
113.5 |
115.4 |
C2' |
C1' |
H9 |
N1 |
230.1 |
237.8 |
H9 |
C1' |
C2' |
H1 |
17.8 |
23.8 |
O4' |
C1' |
H9 |
N1 |
116.6 |
122.3 |
H9 |
C1' |
N1 |
C6 |
116.2 |
352.7 |
N1 |
C6 |
H10 |
C5 |
180.0 |
179.9 |
H10 |
C6 |
C5 |
C21 |
2.1 |
360.0 |
H11 |
O23 |
C21 |
O22 |
360.0 |
360.0 |
C4 |
N4 |
H12 |
H13 |
180.0 |
180.0 |
C4 |
N4 |
H13 |
H12 |
180.0 |
180.0 |
O5' |
P |
OP3 |
OP2 |
|
120.0 |
O5' |
P |
OP3 |
OP1 |
|
240.0 |
OP2 |
P |
OP3 |
OP1 |
|
120.0 |
OP3 |
P |
OP2 |
H7 |
|
60.0 |