PDB Chemical Component 1C9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1C9

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C5 1.443 1.417
C5 C6 1.428 1.400
C5 C10 1.423 1.416
C6 H6 1.080 1.080
C8 N9 1.351 1.324
C8 H8 1.081 1.080
C10 N14 1.431 1.381
C15 C16 1.433 1.389
C15 C20 1.427 1.388
C17 CL 1.722 1.737
C17 C18 1.415 1.385
C20 C19 1.423 1.381
C20 H20 1.080 1.081
C24 C23 1.538 1.331
C24 H24 1.080 1.080
C26 C24 1.520 1.470
C26 O27 1.232 1.216
C19 C18 1.418 1.384
C19 H19 1.080 1.080
C3 C4 1.410 1.400
C3 C2 1.432 1.377
C3 H3 1.080 1.080
C16 C17 1.403 1.382
C16 H16 1.080 1.080
C1 C6 1.422 1.378
C1 N13 1.423 1.400
C2 C1 1.436 1.403
C18 F21 1.341 1.351
C12 O11 1.430 1.429
C12 H12 1.100 1.090
C12 H12A 1.100 1.090
C12 H12B 1.100 1.090
C23 C25 1.533 1.507
C23 H23 1.080 1.079
C25 N33 1.509 1.469
C25 H25 1.100 1.090
C25 H25A 1.099 1.090
N7 C4 1.356 1.342
N7 C8 1.349 1.311
N9 C10 1.380 1.327
N14 C15 1.418 1.399
N14 HN14 1.000 0.970
N13 C26 1.406 1.348
N13 HN13 1.000 0.970
O11 C2 1.392 1.359
N33 C30 1.540 1.468
N33 C34 1.541 1.469
C30 C31 1.541 1.531
C31 C32 1.541 1.531
C32 C33 1.540 1.531
C33 C34 1.540 1.530
C30 H161 1.100 1.090
C30 H17 1.100 1.090
C31 H18 1.100 1.089
C31 H191 1.100 1.091
C32 H201 1.100 1.090
C32 H21 1.100 1.090
C33 H22 1.100 1.089
C33 H231 1.100 1.090
C34 H241 1.100 1.090
C34 H251 1.100 1.090

Bond Angles for 1C9

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 C5 C6 119.3 120.0
C4 C5 C10 115.6 118.2
C3 C4 C5 119.1 119.6
C6 C5 C10 125.2 121.9
C5 C6 H6 119.3 120.2
C1 C6 C5 121.3 119.5
C5 C10 N14 119.7 120.9
C5 C10 N9 121.0 118.3
C1 C6 H6 119.4 120.2
N9 C8 H8 117.0 118.5
N7 C8 N9 126.0 123.0
C8 N9 C10 117.9 121.4
N7 C8 H8 117.0 118.5
N9 C10 N14 119.3 120.9
C10 N14 C15 126.8 120.0
C10 N14 HN14 116.6 120.0
C16 C15 C20 118.3 120.0
C15 C16 C17 121.2 119.9
C15 C16 H16 119.4 120.1
N14 C15 C16 121.8 120.0
C15 C20 C19 120.6 120.0
C15 C20 H20 119.7 120.0
N14 C15 C20 119.9 120.1
C18 C17 CL 121.6 120.0
C16 C17 CL 118.5 120.0
C16 C17 C18 119.9 120.0
C17 C18 F21 120.9 119.9
C20 C19 H19 120.2 120.0
C23 C24 H24 123.9 120.0
C26 C24 C23 112.2 120.0
C24 C23 C25 109.2 120.0
C24 C23 H23 125.4 120.0
C26 C24 H24 123.9 120.0
C24 C26 O27 122.0 120.0
N13 C26 C24 112.1 120.0
N13 C26 O27 126.0 120.0
C19 C18 F21 118.8 119.9
C4 C3 H3 119.0 120.1
C17 C16 H16 119.4 120.1
C6 C1 N13 122.7 119.7
C2 C1 C6 119.5 120.5
C2 C1 N13 117.8 119.8
C1 N13 C26 121.8 120.0
C1 N13 HN13 119.1 120.0
H12 C12 H12A 109.4 109.5
H12 C12 H12B 109.5 109.4
H12A C12 H12B 109.5 109.5
C25 C23 H23 125.4 120.0
C23 C25 N33 110.9 109.5
C23 C25 H25 109.1 109.5
C23 C25 H25A 109.1 109.5
N33 C25 H25 109.1 109.5
N33 C25 H25A 109.1 109.5
C25 N33 C30 98.8 111.0
C25 N33 C34 132.3 111.0
H25 C25 H25A 109.5 109.4
C15 N14 HN14 116.6 120.0
C26 N13 HN13 119.1 120.0
C30 N33 C34 120.0 111.2
N33 C30 C31 120.0 109.5
N33 C30 H161 106.8 109.5
N33 C30 H17 106.8 109.5
N33 C34 C33 120.0 109.5
N33 C34 H241 106.8 109.4
N33 C34 H251 106.8 109.4
C30 C31 C32 120.0 109.3
C31 C30 H161 106.8 109.5
C31 C30 H17 106.8 109.4
C30 C31 H18 106.8 109.5
C30 C31 H191 106.8 109.5
C31 C32 C33 120.0 109.2
C32 C31 H18 106.8 109.5
C32 C31 H191 106.8 109.5
C31 C32 H201 106.8 109.5
C31 C32 H21 106.8 109.5
C32 C33 C34 120.0 109.3
C33 C32 H201 106.8 109.5
C33 C32 H21 106.8 109.6
C32 C33 H22 106.8 109.5
C32 C33 H231 106.8 109.5
C34 C33 H22 106.8 109.5
C34 C33 H231 106.8 109.4
C33 C34 H241 106.8 109.5
C33 C34 H251 106.8 109.5
H161 C30 H17 109.5 109.4
H18 C31 H191 109.5 109.5
H201 C32 H21 109.5 109.5
H22 C33 H231 109.5 109.6
H241 C34 H251 109.5 109.4

Torsion Angles for 1C9

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C5 C4 C10 180.1 180.1
C4 C5 C6 H6 179.9 180.0
C1 C6 C5 C4 359.9 359.9
C4 C5 C10 N14 179.4 180.0
C4 C5 C10 N9 359.5 360.0
C5 C4 C3 H3 179.4 180.0
C4 C5 C6 C10 179.9 179.9
C3 C4 C5 C6 0.7 0.0
C6 C5 C10 N14 359.3 359.9
C6 C5 C10 N9 179.4 179.9
C1 C6 C5 H6 180.0 179.9
C5 C6 C1 N13 178.4 180.0
C2 C1 C6 C5 359.4 0.1
C4 C5 C10 C6 180.1 180.1
C3 C4 C5 C10 180.6 180.0
C10 C5 C6 H6 360.0 0.1
C1 C6 C5 C10 180.0 180.0
C8 N9 C10 C5 0.1 359.5
N9 C10 C5 N14 180.1 180.0
C5 C10 N14 C15 205.4 175.2
C5 C10 N14 HN14 25.4 355.2
H6 C6 C5 C10 360.0 0.1
C1 C6 H6 C5 180.0 180.1
H6 C6 C1 N13 358.4 359.9
C2 C1 C6 H6 179.4 180.0
C5 C10 N9 C8 0.1 359.5
N7 C8 N9 H8 180.0 180.8
C8 N9 C10 N14 180.2 179.5
N7 C8 H8 N9 180.0 179.2
H8 C8 N9 C10 180.4 180.0
C5 C10 N14 N9 180.1 180.0
C10 N14 C15 C16 28.5 215.0
C10 N14 C15 C20 208.7 35.2
C15 N14 C10 HN14 180.0 180.0
C16 C15 C20 C19 359.9 359.9
C16 C15 C20 H20 179.9 179.9
N14 C15 C16 C20 180.3 180.2
C15 C16 C17 CL 179.8 180.0
C15 C16 C17 C18 360.0 360.0
C17 C16 C15 H16 180.0 180.1
C16 C15 N14 HN14 208.5 35.0
C20 C15 C16 C17 0.1 0.1
C20 C15 C16 H16 180.1 180.0
N14 C15 C20 C16 179.7 179.8
C15 C20 C19 H19 180.1 180.0
C20 C15 N14 HN14 28.7 215.2
C16 C17 CL C18 180.2 180.0
CL C17 C18 F21 0.1 0.0
CL C17 C16 H16 359.8 0.1
C16 C17 C18 CL 179.8 180.0
C19 C18 C17 F21 180.1 180.0
C18 C17 C16 H16 180.0 180.1
C15 C20 C19 H20 180.0 180.0
N14 C15 C20 C19 179.6 179.7
C20 C19 C18 F21 180.1 179.9
C15 C20 H20 C19 180.0 180.0
N14 C15 C20 H20 359.6 359.7
H20 C20 C19 H19 0.1 360.0
C26 C24 C23 H24 180.0 180.0
C23 C24 C26 O27 360.0 360.0
N13 C26 C24 C23 178.5 180.0
C25 C23 C24 H23 180.0 180.0
C24 C23 C25 N33 194.7 125.0
C24 C23 C25 H25 315.0 245.0
C24 C23 C25 H25A 74.5 4.9
C26 C24 H24 C23 180.0 180.0
H24 C24 C23 C25 349.8 0.0
H24 C24 C23 H23 169.9 180.0
H24 C24 C26 O27 180.0 180.0
N13 C26 C24 H24 358.5 0.0
C23 C24 C26 H24 180.0 180.0
C26 C24 C23 C25 169.9 180.0
C26 C24 C23 H23 349.9 0.0
N13 C26 C24 O27 178.5 180.1
C1 N13 C26 C24 181.8 185.6
C24 C26 N13 HN13 1.8 5.5
O27 C26 C24 C23 360.0 360.0
O27 C26 C24 H24 180.0 180.0
N13 C26 O27 C24 181.7 179.9
C1 N13 C26 O27 0.2 5.6
O27 C26 N13 HN13 180.2 185.6
C15 C20 C19 C18 0.1 0.1
C19 C18 C17 CL 180.2 180.0
C17 C18 C19 F21 179.9 180.0
H19 C19 C18 F21 0.1 0.0
C3 C2 C1 C6 0.7 359.9
C3 C2 C1 N13 181.7 180.0
H3 C3 C4 C5 179.4 180.0
C17 C16 C15 C20 0.1 0.1
C15 C16 C17 H16 180.0 179.9
N14 C15 C16 C17 180.4 180.3
C18 C17 C16 CL 180.2 180.0
C16 C17 C18 F21 179.8 180.1
H16 C16 C15 C20 180.1 180.0
C15 C16 H16 C17 180.0 180.1
N14 C15 C16 H16 0.3 0.2
H16 C16 C17 CL 359.8 0.1
H16 C16 C17 C18 180.0 180.1
C4 C5 C6 C1 359.9 359.9
C5 C6 C1 H6 180.0 180.1
C2 C1 C6 N13 181.0 180.1
C6 C1 N13 C26 307.2 24.9
C6 C1 N13 HN13 127.3 204.9
N13 C1 C6 C5 178.4 180.0
N13 C1 C6 H6 358.4 359.9
C2 C1 N13 C6 179.0 179.9
C26 N13 C1 HN13 180.0 180.0
C6 C1 C2 N13 179.1 179.9
C2 C1 N13 C26 126.3 204.8
C2 C1 N13 HN13 306.3 24.9
F21 C18 C17 CL 0.1 0.0
H12A C12 H12 H12B 120.0 120.0
H12 C12 H12A H12B 240.0 240.0
H12 C12 H12B H12A 120.0 120.0
C25 C23 C24 H24 349.8 0.0
C24 C23 C25 H23 180.0 180.0
N33 C25 C23 H25 239.8 240.0
N33 C25 C23 H25A 120.2 120.1
C23 C25 N33 C30 196.3 170.0
C23 C25 N33 C34 341.8 294.2
H25 C25 C23 H25A 240.4 240.1
H23 C23 C24 H24 169.9 180.0
C24 C23 H23 C25 180.0 180.0
H23 C23 C25 N33 14.7 305.0
H23 C23 C25 H25 134.9 65.0
H23 C23 C25 H25A 254.5 185.0
N33 C25 C23 H23 14.7 305.0
C23 C25 N33 H25 120.2 120.0
C23 C25 N33 H25A 239.8 239.9
H25 C25 N33 H25A 119.6 119.9
C30 N33 C25 C34 214.5 235.8
C25 N33 C30 C31 151.1 185.8
C25 N33 C30 H161 272.6 305.9
C25 N33 C30 H17 29.6 65.8
C25 N33 C34 C33 220.2 174.1
C25 N33 C34 H241 341.7 294.2
C25 N33 C34 H251 98.8 54.1
H25 C25 C23 H23 134.9 65.0
C23 C25 H25 N33 238.7 240.0
C23 C25 H25 H25A 119.3 120.0
N33 C25 H25 H25A 240.6 240.0
H25 C25 N33 C30 76.1 50.0
H25 C25 N33 C34 221.6 174.2
H25A C25 C23 H23 254.5 185.0
C23 C25 H25A N33 121.3 120.1
C23 C25 H25A H25 240.7 240.0
N33 C25 H25A H25 119.4 120.0
H25A C25 N33 C30 316.5 290.0
H25A C25 N33 C34 102.0 54.3
N7 C4 C5 C10 0.5 0.3
N7 C4 C3 H3 359.5 359.7
N9 C8 N7 H8 180.0 179.2
N7 C8 N9 C10 0.4 0.8
C5 C10 N9 N14 179.9 180.0
C10 N9 C8 H8 180.4 180.0
N9 C10 N14 C15 25.3 355.2
N9 C10 N14 HN14 205.3 175.2
C10 N14 C15 HN14 180.0 180.0
C16 C15 N14 C20 179.7 179.8
C10 N14 HN14 C15 180.0 180.0
HN14 N14 C15 C16 208.5 35.0
HN14 N14 C15 C20 28.7 215.2
C24 C26 N13 O27 181.6 179.9
C1 N13 C26 HN13 180.0 180.0
HN13 N13 C26 C24 1.8 5.5
HN13 N13 C26 O27 180.2 185.6
C1 N13 HN13 C26 180.0 180.0
O11 C2 C1 N13 1.6 0.1
C30 N33 C25 H25 76.1 50.0
C30 N33 C25 H25A 316.5 290.0
C25 N33 C30 C34 151.1 124.1
C30 N33 C34 C33 -0.0 298.2
C30 N33 C34 H241 121.5 58.3
C30 N33 C34 H251 238.5 178.2
N33 C30 C31 C32 -0.0 300.8
C31 C30 N33 H161 238.5 240.0
C31 C30 N33 H17 121.5 120.0
N33 C30 C31 H18 121.5 60.8
N33 C30 C31 H191 238.5 180.9
H161 C30 N33 H17 243.0 240.0
C34 N33 C25 H25 221.6 174.2
C34 N33 C25 H25A 102.0 54.3
C25 N33 C34 C30 220.2 235.9
C34 N33 C30 C31 -0.0 61.8
C34 N33 C30 H161 121.5 181.8
C34 N33 C30 H17 238.5 301.7
C32 C33 C34 N33 -0.0 59.2
N33 C34 C33 H22 238.5 299.2
N33 C34 C33 H231 121.5 179.1
C33 C34 N33 H241 238.5 239.9
C33 C34 N33 H251 121.5 120.0
H241 C34 N33 H251 243.0 240.1
C31 C30 N33 C34 360.0 61.8
N33 C30 C31 H161 121.5 120.0
N33 C30 C31 H17 238.5 240.0
C30 C31 C32 C33 -0.0 57.7
C32 C31 C30 H18 238.5 240.0
C32 C31 C30 H191 121.5 119.9
C30 C31 C32 H201 121.5 177.6
C30 C31 C32 H21 238.5 297.7
H161 C30 C31 H17 117.0 119.9
H18 C31 C30 H191 243.0 239.9
C32 C31 C30 H161 238.5 180.8
C32 C31 C30 H17 121.5 60.8
C30 C31 C32 H18 121.5 119.9
C30 C31 C32 H191 238.5 240.1
C31 C32 C33 C34 360.0 302.3
C33 C32 C31 H201 238.5 240.1
C33 C32 C31 H21 121.5 119.9
C31 C32 C33 H22 121.5 62.3
C31 C32 C33 H231 238.5 182.4
H18 C31 C32 H191 117.0 120.1
H201 C32 C31 H21 243.0 239.9
N33 C34 C33 C32 -0.0 59.2
C33 C32 C31 H18 238.5 297.7
C33 C32 C31 H191 121.5 177.6
C31 C32 C33 H201 121.5 119.9
C31 C32 C33 H21 238.5 240.1
C34 C33 C32 H22 238.5 240.0
C34 C33 C32 H231 121.5 119.9
C32 C33 C34 H241 238.5 299.2
C32 C33 C34 H251 121.5 179.2
H201 C32 C33 H21 117.0 120.2
H22 C33 C32 H231 243.0 239.8
N33 C34 C33 H241 121.5 120.0
N33 C34 C33 H251 238.5 240.0
C34 C33 C32 H201 238.5 182.4
C34 C33 C32 H21 121.5 62.2
C32 C33 C34 H22 121.5 120.0
C32 C33 C34 H231 238.5 240.1
H22 C33 C34 H231 117.0 120.1
H241 C34 C33 H251 117.0 120.0
H161 C30 N33 C34 121.5 181.8
N33 C30 H161 C31 230.5 239.9
N33 C30 H161 H17 115.2 120.0
H161 C30 C31 C32 238.5 180.8
C31 C30 H161 H17 244.8 240.1
H161 C30 C31 H18 360.0 300.7
H161 C30 C31 H191 117.0 60.8
H17 C30 N33 C34 238.5 301.7
N33 C30 H17 C31 129.5 120.0
N33 C30 H17 H161 244.8 240.0
H17 C30 C31 C32 121.5 60.8
C31 C30 H17 H161 115.2 119.9
H17 C30 C31 H18 243.0 180.8
H17 C30 C31 H191 0.0 300.9
C30 C31 H18 C32 230.5 240.2
H18 C31 C30 H161 360.0 300.7
H18 C31 C30 H17 243.0 180.8
C30 C31 H18 H191 115.2 120.1
H18 C31 C32 C33 238.5 297.7
C32 C31 H18 H191 244.8 239.9
H18 C31 C32 H201 0.0 57.7
H18 C31 C32 H21 117.0 177.8
C30 C31 H191 C32 129.5 119.8
H191 C31 C30 H161 117.0 60.8
H191 C31 C30 H17 0.0 300.9
C30 C31 H191 H18 244.8 239.9
H191 C31 C32 C33 121.5 177.6
C32 C31 H191 H18 115.2 120.1
H191 C31 C32 H201 243.0 297.5
H191 C31 C32 H21 360.0 57.7
C31 C32 H201 C33 230.5 240.3
H201 C32 C31 H18 0.0 57.7
H201 C32 C31 H191 243.0 297.5
C31 C32 H201 H21 115.2 120.1
H201 C32 C33 C34 238.5 182.4
C33 C32 H201 H21 244.7 239.8
H201 C32 C33 H22 0.0 302.3
H201 C32 C33 H231 117.0 62.5
C31 C32 H21 C33 129.5 119.7
H21 C32 C31 H18 117.0 177.8
H21 C32 C31 H191 360.0 57.7
C31 C32 H21 H201 244.8 239.9
H21 C32 C33 C34 121.5 62.2
C33 C32 H21 H201 115.3 120.2
H21 C32 C33 H22 243.0 182.2
H21 C32 C33 H231 360.0 302.3
C32 C33 H22 C34 230.4 240.2
H22 C33 C32 H201 0.0 302.3
H22 C33 C32 H21 243.0 182.2
C32 C33 H22 H231 115.2 120.1
C34 C33 H22 H231 244.8 239.9
H22 C33 C34 H241 117.0 179.2
H22 C33 C34 H251 360.0 59.2
C32 C33 H231 C34 129.6 119.7
H231 C33 C32 H201 117.0 62.5
H231 C33 C32 H21 360.0 302.3
C32 C33 H231 H22 244.8 239.9
C34 C33 H231 H22 115.2 120.1
H231 C33 C34 H241 0.0 59.1
H231 C33 C34 H251 243.0 299.1
N33 C34 H241 C33 230.5 240.0
N33 C34 H241 H251 115.2 119.9
H241 C34 C33 H22 117.0 179.2
H241 C34 C33 H231 0.0 59.1
C33 C34 H241 H251 244.8 240.0
N33 C34 H251 C33 129.5 120.0
N33 C34 H251 H241 244.8 240.1
H251 C34 C33 H22 360.0 59.2
H251 C34 C33 H231 243.0 299.1
C33 C34 H251 H241 115.2 120.1