PDB Chemical Component 1C8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 1C8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C14 |
C13 |
1.503 |
1.530 |
C13 |
C8 |
1.528 |
1.529 |
C24 |
C23 |
1.378 |
1.346 |
C24 |
N20 |
1.301 |
1.375 |
C23 |
N22 |
1.328 |
1.339 |
C19 |
C18 |
1.520 |
1.549 |
C19 |
C15 |
1.521 |
1.543 |
C11 |
N10 |
1.458 |
1.465 |
C1 |
N6 |
1.325 |
1.327 |
C1 |
C2 |
1.379 |
1.384 |
N6 |
C5 |
1.335 |
1.322 |
N10 |
C2 |
1.390 |
1.401 |
N10 |
C9 |
1.417 |
1.351 |
C2 |
C3 |
1.461 |
1.399 |
O12 |
C9 |
1.236 |
1.213 |
C9 |
C8 |
1.470 |
1.507 |
C5 |
N20 |
1.309 |
1.395 |
C5 |
N4 |
1.337 |
1.324 |
N20 |
C21 |
1.298 |
1.369 |
C3 |
N4 |
1.322 |
1.328 |
C3 |
N7 |
1.382 |
1.382 |
C18 |
C17 |
1.525 |
1.549 |
C8 |
N7 |
1.447 |
1.465 |
N7 |
C15 |
1.447 |
1.470 |
N22 |
C21 |
1.327 |
1.315 |
C15 |
C16 |
1.513 |
1.539 |
C21 |
C25 |
1.484 |
1.478 |
C17 |
C16 |
1.507 |
1.543 |
C25 |
N26 |
1.352 |
1.327 |
C25 |
C29 |
1.376 |
1.351 |
N26 |
C27 |
1.323 |
1.287 |
C29 |
S28 |
1.699 |
1.762 |
C27 |
S28 |
1.715 |
1.710 |
C11 |
H1 |
1.100 |
1.090 |
C11 |
H2 |
1.100 |
1.090 |
C11 |
H3 |
1.100 |
1.090 |
C8 |
H4 |
1.100 |
1.090 |
C13 |
H5 |
1.100 |
1.089 |
C13 |
H6 |
1.100 |
1.090 |
C14 |
H7 |
1.100 |
1.090 |
C14 |
H8 |
1.100 |
1.090 |
C14 |
H9 |
1.100 |
1.090 |
C15 |
H10 |
1.100 |
1.090 |
C19 |
H11 |
1.100 |
1.089 |
C19 |
H12 |
1.100 |
1.091 |
C18 |
H13 |
1.100 |
1.090 |
C18 |
H14 |
1.100 |
1.090 |
C17 |
H15 |
1.100 |
1.090 |
C17 |
H16 |
1.100 |
1.090 |
C16 |
H17 |
1.100 |
1.090 |
C16 |
H18 |
1.100 |
1.090 |
C1 |
H19 |
1.080 |
1.080 |
C24 |
H20 |
1.080 |
1.079 |
C23 |
H21 |
1.079 |
1.081 |
C29 |
H22 |
1.080 |
1.080 |
C27 |
H23 |
1.080 |
1.080 |
Bond Angles for 1C8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
H5 |
108.0 |
109.5 |
C14 |
C13 |
H6 |
108.0 |
109.4 |
C13 |
C8 |
N7 |
105.9 |
109.4 |
C13 |
C8 |
H4 |
107.4 |
109.3 |
C24 |
C23 |
N22 |
109.1 |
108.6 |
C23 |
C24 |
H20 |
127.3 |
126.5 |
C24 |
C23 |
H21 |
125.4 |
125.7 |
C24 |
N20 |
C21 |
109.5 |
106.9 |
C23 |
N22 |
C21 |
105.0 |
109.3 |
N22 |
C23 |
H21 |
125.4 |
125.7 |
C19 |
C18 |
C17 |
109.0 |
102.8 |
C18 |
C19 |
H11 |
110.7 |
110.5 |
C18 |
C19 |
H12 |
110.7 |
110.5 |
C19 |
C18 |
H13 |
109.6 |
110.7 |
C19 |
C18 |
H14 |
109.6 |
110.8 |
C19 |
C15 |
C16 |
109.8 |
106.6 |
C19 |
C15 |
H10 |
102.8 |
110.1 |
C11 |
N10 |
C2 |
120.0 |
120.8 |
N6 |
C5 |
N20 |
119.2 |
119.0 |
N10 |
C2 |
C3 |
119.3 |
120.0 |
N10 |
C9 |
C8 |
122.0 |
119.4 |
C2 |
C3 |
N4 |
118.7 |
118.9 |
C2 |
C3 |
N7 |
121.5 |
120.4 |
O12 |
C9 |
C8 |
118.4 |
120.3 |
C9 |
C8 |
N7 |
116.3 |
110.2 |
C9 |
C8 |
H4 |
108.2 |
109.3 |
C5 |
N20 |
C21 |
129.4 |
126.6 |
N20 |
C21 |
N22 |
110.7 |
108.3 |
N20 |
C21 |
C25 |
128.1 |
125.9 |
C18 |
C17 |
C16 |
107.8 |
104.2 |
C17 |
C18 |
H13 |
109.6 |
110.8 |
C17 |
C18 |
H14 |
109.6 |
110.7 |
C18 |
C17 |
H15 |
109.9 |
110.5 |
C18 |
C17 |
H16 |
109.9 |
110.5 |
C8 |
N7 |
C15 |
119.1 |
111.0 |
N7 |
C8 |
H4 |
108.5 |
109.3 |
N7 |
C15 |
C16 |
111.4 |
110.0 |
N7 |
C15 |
H10 |
103.5 |
110.0 |
N22 |
C21 |
C25 |
121.0 |
125.9 |
C15 |
C16 |
C17 |
106.2 |
106.6 |
C16 |
C15 |
H10 |
102.9 |
110.0 |
C15 |
C16 |
H17 |
110.3 |
110.0 |
C15 |
C16 |
H18 |
110.3 |
110.0 |
C21 |
C25 |
N26 |
119.6 |
123.0 |
C21 |
C25 |
C29 |
117.2 |
123.0 |
C16 |
C17 |
H15 |
109.9 |
110.4 |
C16 |
C17 |
H16 |
109.9 |
110.5 |
C17 |
C16 |
H17 |
110.3 |
110.0 |
C17 |
C16 |
H18 |
110.3 |
110.0 |
C29 |
C25 |
N26 |
123.2 |
114.0 |
C25 |
N26 |
C27 |
110.9 |
117.1 |
C25 |
C29 |
S28 |
99.9 |
107.8 |
C25 |
C29 |
H22 |
130.0 |
126.1 |
N26 |
C27 |
H23 |
126.0 |
124.7 |
S28 |
C29 |
H22 |
130.0 |
126.1 |
H1 |
C11 |
H2 |
109.5 |
109.5 |
H1 |
C11 |
H3 |
109.5 |
109.5 |
H2 |
C11 |
H3 |
109.5 |
109.5 |
H5 |
C13 |
H6 |
109.5 |
109.5 |
H7 |
C14 |
H8 |
109.5 |
109.5 |
H7 |
C14 |
H9 |
109.5 |
109.4 |
H8 |
C14 |
H9 |
109.5 |
109.4 |
H11 |
C19 |
H12 |
109.5 |
110.6 |
H13 |
C18 |
H14 |
109.4 |
110.8 |
H15 |
C17 |
H16 |
109.5 |
110.6 |
H17 |
C16 |
H18 |
109.5 |
110.1 |
Torsion Angles for 1C8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
C8 |
N7 |
301.9 |
176.9 |
C14 |
C13 |
C8 |
H4 |
186.1 |
57.3 |
H5 |
C13 |
C14 |
H6 |
241.7 |
120.0 |
C9 |
C8 |
C13 |
N7 |
126.6 |
120.8 |
C9 |
C8 |
C13 |
H4 |
242.3 |
240.4 |
C13 |
C8 |
N7 |
C15 |
299.5 |
305.7 |
N7 |
C8 |
C13 |
H4 |
115.7 |
119.6 |
C23 |
C24 |
N20 |
C21 |
357.1 |
0.3 |
C24 |
C23 |
N22 |
C21 |
1.2 |
359.7 |
N22 |
C23 |
C24 |
H21 |
180.0 |
180.0 |
C5 |
N20 |
C24 |
C21 |
185.1 |
179.7 |
C24 |
N20 |
C21 |
N22 |
3.8 |
359.5 |
C24 |
N20 |
C21 |
C25 |
179.2 |
179.8 |
N22 |
C23 |
C24 |
H20 |
181.1 |
180.0 |
C24 |
C23 |
N22 |
H21 |
180.0 |
180.0 |
N20 |
C21 |
N22 |
C23 |
357.0 |
0.5 |
C23 |
N22 |
C21 |
C25 |
181.2 |
180.2 |
C18 |
C19 |
C15 |
C16 |
342.7 |
336.3 |
C18 |
C19 |
C15 |
H10 |
91.7 |
95.7 |
C19 |
C18 |
C17 |
C16 |
356.7 |
322.1 |
C17 |
C18 |
C19 |
H13 |
240.0 |
241.7 |
C17 |
C18 |
C19 |
H14 |
119.9 |
118.3 |
C19 |
C18 |
C17 |
H15 |
116.5 |
80.6 |
C19 |
C18 |
C17 |
H16 |
237.0 |
203.3 |
H11 |
C19 |
C18 |
H12 |
238.3 |
122.7 |
H13 |
C18 |
C19 |
H14 |
239.9 |
236.7 |
N7 |
C15 |
C19 |
C16 |
225.1 |
240.8 |
N7 |
C15 |
C19 |
H10 |
116.1 |
121.4 |
C19 |
C15 |
C16 |
C17 |
15.6 |
0.0 |
C16 |
C15 |
C19 |
H10 |
251.0 |
240.6 |
C19 |
C15 |
C16 |
H17 |
135.1 |
119.3 |
C19 |
C15 |
C16 |
H18 |
256.1 |
240.8 |
C11 |
N10 |
C2 |
C3 |
181.4 |
167.3 |
C11 |
N10 |
C9 |
C8 |
178.1 |
174.4 |
C1 |
N6 |
C5 |
N20 |
177.4 |
179.5 |
N6 |
C5 |
N20 |
C21 |
149.6 |
49.0 |
C2 |
N10 |
C9 |
C8 |
1.4 |
354.4 |
N10 |
C2 |
C3 |
N4 |
180.9 |
178.7 |
N10 |
C2 |
C3 |
N7 |
0.7 |
356.9 |
O12 |
C9 |
N10 |
C8 |
180.4 |
179.8 |
N10 |
C9 |
C8 |
N7 |
0.2 |
36.6 |
N10 |
C9 |
C8 |
H4 |
122.5 |
156.7 |
N10 |
C9 |
O12 |
C8 |
179.6 |
180.2 |
O12 |
C9 |
C8 |
N7 |
179.8 |
216.8 |
O12 |
C9 |
C8 |
H4 |
302.1 |
336.9 |
C13 |
C8 |
C9 |
N7 |
239.5 |
239.7 |
C13 |
C8 |
C9 |
H4 |
117.2 |
119.6 |
C9 |
C8 |
N7 |
C15 |
176.7 |
185.4 |
N7 |
C8 |
C9 |
H4 |
237.7 |
239.8 |
C24 |
N20 |
C5 |
C21 |
173.7 |
180.4 |
C5 |
N20 |
C21 |
N22 |
178.1 |
179.8 |
C5 |
N20 |
C21 |
C25 |
353.5 |
0.1 |
C23 |
N22 |
C21 |
N20 |
357.0 |
0.5 |
N22 |
C21 |
N20 |
C25 |
184.6 |
179.8 |
N20 |
C21 |
C25 |
N26 |
136.9 |
5.5 |
N20 |
C21 |
C25 |
C29 |
315.0 |
185.9 |
C2 |
C3 |
N4 |
N7 |
179.8 |
178.3 |
C2 |
C3 |
N7 |
N4 |
180.2 |
181.8 |
C3 |
N7 |
C8 |
H4 |
236.5 |
190.1 |
C3 |
N7 |
C15 |
H10 |
27.1 |
305.7 |
C17 |
C18 |
C19 |
H11 |
131.5 |
279.3 |
C17 |
C18 |
C19 |
H12 |
253.2 |
156.6 |
C19 |
C18 |
C17 |
H13 |
119.9 |
118.3 |
C19 |
C18 |
C17 |
H14 |
240.1 |
241.6 |
C15 |
C16 |
C17 |
C18 |
352.6 |
23.6 |
C16 |
C17 |
C18 |
H15 |
240.3 |
241.4 |
C16 |
C17 |
C18 |
H16 |
119.7 |
118.7 |
C18 |
C17 |
C16 |
H17 |
233.2 |
264.3 |
C18 |
C17 |
C16 |
H18 |
112.1 |
142.9 |
H13 |
C18 |
C17 |
H14 |
120.1 |
123.3 |
H15 |
C17 |
C18 |
H16 |
239.4 |
237.3 |
C13 |
C8 |
N7 |
H4 |
245.0 |
240.4 |
C2 |
C3 |
N7 |
C8 |
1.0 |
35.4 |
C9 |
C8 |
N7 |
H4 |
122.1 |
120.2 |
C8 |
N7 |
C15 |
C16 |
319.0 |
192.7 |
C8 |
N7 |
C15 |
H10 |
209.0 |
71.3 |
C19 |
C15 |
N7 |
C16 |
134.3 |
117.2 |
C19 |
C15 |
N7 |
H10 |
244.2 |
238.5 |
C2 |
C3 |
N7 |
C15 |
182.9 |
160.2 |
C15 |
N7 |
C8 |
H4 |
54.6 |
65.3 |
N7 |
C15 |
C16 |
C17 |
156.3 |
119.3 |
C16 |
C15 |
N7 |
H10 |
110.0 |
121.4 |
N7 |
C15 |
C16 |
H17 |
275.8 |
238.6 |
N7 |
C15 |
C16 |
H18 |
36.8 |
360.0 |
C21 |
N22 |
C23 |
H21 |
181.1 |
179.7 |
N20 |
C21 |
N22 |
C25 |
175.7 |
180.2 |
N22 |
C21 |
C25 |
N26 |
311.8 |
185.8 |
N22 |
C21 |
C25 |
C29 |
129.9 |
6.1 |
C19 |
C15 |
C16 |
H10 |
108.9 |
119.4 |
C18 |
C17 |
C16 |
C15 |
352.6 |
23.6 |
N7 |
C15 |
C16 |
H10 |
249.7 |
238.7 |
C15 |
C16 |
C17 |
H15 |
232.9 |
265.0 |
C15 |
C16 |
C17 |
H16 |
112.4 |
142.2 |
C17 |
C16 |
C15 |
H17 |
240.5 |
240.7 |
C17 |
C16 |
C15 |
H18 |
119.5 |
119.3 |
H17 |
C16 |
C15 |
H18 |
239.0 |
238.6 |
N20 |
C21 |
C25 |
N22 |
185.1 |
179.7 |
C29 |
C25 |
C21 |
N26 |
178.1 |
180.4 |
C21 |
C25 |
N26 |
C27 |
179.1 |
179.8 |
C21 |
C25 |
C29 |
S28 |
181.1 |
180.0 |
C21 |
C25 |
C29 |
H22 |
1.2 |
359.9 |
C16 |
C17 |
C18 |
H13 |
236.8 |
203.7 |
C16 |
C17 |
C18 |
H14 |
116.7 |
80.4 |
C18 |
C17 |
C16 |
H15 |
119.7 |
118.6 |
C18 |
C17 |
C16 |
H16 |
240.3 |
241.3 |
C17 |
C16 |
C15 |
H10 |
266.6 |
240.6 |
C15 |
C16 |
C17 |
H17 |
119.5 |
119.3 |
C15 |
C16 |
C17 |
H18 |
240.5 |
240.7 |
H15 |
C17 |
C16 |
H16 |
120.6 |
122.7 |
H17 |
C16 |
C17 |
H18 |
121.1 |
121.5 |
C21 |
C25 |
N26 |
C29 |
177.9 |
180.3 |
N26 |
C25 |
C29 |
S28 |
359.1 |
0.3 |
N26 |
C25 |
C29 |
H22 |
179.2 |
180.2 |
C25 |
N26 |
C27 |
H23 |
179.2 |
180.3 |
C21 |
C25 |
C29 |
N26 |
182.0 |
179.7 |
C29 |
C25 |
N26 |
C27 |
1.2 |
359.4 |
S28 |
C29 |
C25 |
H22 |
180.0 |
180.1 |
S28 |
C29 |
C25 |
N26 |
359.1 |
0.3 |
C25 |
C29 |
S28 |
H22 |
180.0 |
179.9 |
C25 |
N26 |
C27 |
S28 |
359.2 |
0.5 |
C27 |
S28 |
C29 |
H22 |
180.3 |
180.1 |
H1 |
C11 |
N10 |
C2 |
180.0 |
90.0 |
H2 |
C11 |
H1 |
H3 |
120.0 |
120.0 |
H2 |
C11 |
N10 |
C2 |
300.0 |
210.0 |
H1 |
C11 |
H2 |
H3 |
240.0 |
240.0 |
H3 |
C11 |
N10 |
C2 |
60.0 |
330.0 |
H1 |
C11 |
H3 |
H2 |
120.0 |
120.0 |
C13 |
C8 |
H4 |
N7 |
114.0 |
119.6 |
C9 |
C8 |
H4 |
N7 |
233.1 |
239.3 |
H4 |
C8 |
N7 |
C15 |
54.6 |
65.3 |
C14 |
C13 |
H5 |
H6 |
117.3 |
240.0 |
H5 |
C13 |
C8 |
N7 |
181.0 |
296.9 |
H5 |
C13 |
C8 |
H4 |
65.3 |
177.3 |
C14 |
C13 |
H6 |
H5 |
242.7 |
120.0 |
H6 |
C13 |
C8 |
N7 |
62.7 |
56.9 |
H6 |
C13 |
C8 |
H4 |
307.0 |
297.3 |
H7 |
C14 |
C13 |
H5 |
300.9 |
65.3 |
H7 |
C14 |
C13 |
H6 |
59.2 |
305.3 |
H8 |
C14 |
H7 |
H9 |
120.0 |
120.0 |
H8 |
C14 |
C13 |
H5 |
60.9 |
185.4 |
H8 |
C14 |
C13 |
H6 |
179.2 |
65.4 |
H7 |
C14 |
H8 |
H9 |
239.9 |
240.0 |
H9 |
C14 |
C13 |
H5 |
180.8 |
305.4 |
H9 |
C14 |
C13 |
H6 |
299.1 |
185.4 |
H7 |
C14 |
H9 |
H8 |
120.0 |
120.0 |
C19 |
C15 |
H10 |
C16 |
245.9 |
242.8 |
N7 |
C15 |
H10 |
C16 |
116.1 |
121.4 |
H10 |
C15 |
C16 |
C17 |
266.6 |
240.6 |
H10 |
C15 |
C16 |
H17 |
26.1 |
359.9 |
H10 |
C15 |
C16 |
H18 |
147.1 |
121.3 |
H11 |
C19 |
C18 |
C17 |
131.5 |
279.3 |
C18 |
C19 |
H11 |
H12 |
122.4 |
237.4 |
H11 |
C19 |
C18 |
H13 |
251.5 |
37.6 |
H11 |
C19 |
C18 |
H14 |
11.6 |
161.0 |
H11 |
C19 |
C15 |
C16 |
223.6 |
95.0 |
H11 |
C19 |
C15 |
H10 |
332.6 |
214.4 |
H12 |
C19 |
C18 |
C17 |
253.2 |
156.6 |
C18 |
C19 |
H12 |
H11 |
237.6 |
122.7 |
H12 |
C19 |
C18 |
H13 |
13.2 |
274.9 |
H12 |
C19 |
C18 |
H14 |
133.3 |
38.3 |
H12 |
C19 |
C15 |
C16 |
101.9 |
217.7 |
H12 |
C19 |
C15 |
H10 |
210.9 |
337.1 |
C19 |
C18 |
H13 |
C17 |
240.4 |
246.6 |
H13 |
C18 |
C19 |
H11 |
251.5 |
37.6 |
H13 |
C18 |
C19 |
H12 |
13.2 |
274.9 |
C19 |
C18 |
H13 |
H14 |
120.2 |
123.3 |
H13 |
C18 |
C17 |
C16 |
236.8 |
203.7 |
C17 |
C18 |
H13 |
H14 |
239.8 |
236.7 |
H13 |
C18 |
C17 |
H15 |
356.5 |
322.3 |
H13 |
C18 |
C17 |
H16 |
117.1 |
85.0 |
C19 |
C18 |
H14 |
C17 |
119.6 |
113.4 |
H14 |
C18 |
C19 |
H11 |
11.6 |
161.0 |
H14 |
C18 |
C19 |
H12 |
133.3 |
38.3 |
C19 |
C18 |
H14 |
H13 |
239.8 |
236.7 |
H14 |
C18 |
C17 |
C16 |
116.7 |
80.4 |
C17 |
C18 |
H14 |
H13 |
120.2 |
123.3 |
H14 |
C18 |
C17 |
H15 |
236.4 |
199.0 |
H14 |
C18 |
C17 |
H16 |
357.0 |
321.7 |
C18 |
C17 |
H15 |
C16 |
241.6 |
245.3 |
H15 |
C17 |
C18 |
H13 |
356.5 |
322.3 |
H15 |
C17 |
C18 |
H14 |
236.4 |
199.0 |
C18 |
C17 |
H15 |
H16 |
120.8 |
122.6 |
C16 |
C17 |
H15 |
H16 |
239.2 |
237.3 |
H15 |
C17 |
C16 |
H17 |
113.4 |
145.7 |
H15 |
C17 |
C16 |
H18 |
352.4 |
24.3 |
C18 |
C17 |
H16 |
C16 |
118.4 |
114.7 |
H16 |
C17 |
C18 |
H13 |
117.1 |
85.0 |
H16 |
C17 |
C18 |
H14 |
357.0 |
321.7 |
C18 |
C17 |
H16 |
H15 |
239.2 |
237.4 |
C16 |
C17 |
H16 |
H15 |
120.8 |
122.6 |
H16 |
C17 |
C16 |
H17 |
352.9 |
23.0 |
H16 |
C17 |
C16 |
H18 |
231.8 |
261.5 |
C15 |
C16 |
H17 |
C17 |
243.0 |
242.8 |
H17 |
C16 |
C15 |
H10 |
26.1 |
359.9 |
C15 |
C16 |
H17 |
H18 |
121.5 |
121.4 |
H17 |
C16 |
C17 |
H15 |
113.4 |
145.7 |
H17 |
C16 |
C17 |
H16 |
352.9 |
23.0 |
C17 |
C16 |
H17 |
H18 |
238.5 |
238.6 |
C15 |
C16 |
H18 |
C17 |
117.0 |
117.2 |
H18 |
C16 |
C15 |
H10 |
147.1 |
121.3 |
C15 |
C16 |
H18 |
H17 |
238.5 |
238.6 |
H18 |
C16 |
C17 |
H15 |
352.4 |
24.3 |
H18 |
C16 |
C17 |
H16 |
231.8 |
261.5 |
C17 |
C16 |
H18 |
H17 |
121.5 |
121.4 |
H20 |
C24 |
C23 |
N22 |
181.1 |
180.0 |
H20 |
C24 |
C23 |
H21 |
1.1 |
0.1 |
H20 |
C24 |
N20 |
C21 |
177.1 |
180.2 |
C24 |
C23 |
H21 |
N22 |
180.0 |
179.9 |
H21 |
C23 |
C24 |
H20 |
1.1 |
0.1 |
H21 |
C23 |
N22 |
C21 |
181.1 |
179.7 |
H22 |
C29 |
C25 |
N26 |
179.2 |
180.2 |
C25 |
C29 |
H22 |
S28 |
180.0 |
180.1 |