PDB Chemical Component 1AY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 1AY

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CL8	C7	1.773	1.737
C1	C7	1.375	1.384
C1	N2	1.344	1.318
C7	C6	1.390	1.389
N2	C3	1.372	1.326
C6	C5	1.389	1.385
C3	C5	1.384	1.392
C3	C4	1.383	1.484
N25	C4	1.350	1.326
N25	C23	1.346	1.325
C24	C23	1.520	1.506
C4	N9	1.362	1.326
C23	C21	1.386	1.383
N9	C10	1.366	1.327
C21	C10	1.395	1.399
C21	CL2	1.788	1.736
C10	N11	1.363	1.386
N11	C12	1.471	1.465
C12	C13	1.545	1.529
C13	C14	1.507	1.507
C13	N15	1.373	1.469
C26	C14	1.408	1.382
C26	C27	1.404	1.382
C14	C30	1.408	1.382
N15	C16	1.463	1.470
C27	C28	1.402	1.382
C30	C29	1.404	1.383
C16	C17	1.533	1.530
C28	C29	1.400	1.382
C17	C18	1.534	1.530
C36	C35	1.399	1.382
C36	C31	1.406	1.383
C18	C19	1.533	1.531
C35	C34	1.399	1.382
C19	C31	1.522	1.507
C31	C32	1.399	1.382
C34	C33	1.401	1.382
C32	C33	1.402	1.382
C5	H1	1.080	1.080
C6	H2	1.080	1.079
C1	H3	1.080	1.080
C24	H4	1.100	1.091
C24	H5	1.100	1.091
C24	H6	1.100	1.089
N11	H7	1.001	0.970
C12	H8	1.100	1.091
C12	H9	1.100	1.090
C13	H10	1.100	1.090
C26	H11	1.079	1.080
C27	H12	1.080	1.080
C28	H13	1.080	1.080
C29	H14	1.080	1.080
C30	H15	1.080	1.079
N15	H16	1.000	1.008
C16	H18	1.100	1.090
C16	H19	1.100	1.090
C17	H20	1.100	1.090
C17	H21	1.099	1.091
C18	H22	1.100	1.090
C18	H23	1.100	1.090
C19	H24	1.101	1.090
C19	H25	1.099	1.090
C36	H26	1.079	1.079
C35	H27	1.080	1.080
C34	H28	1.080	1.080
C33	H29	1.080	1.081
C32	H30	1.080	1.080

Bond Angles for 1AY

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C7	C6	H2	120.2	120.8
C6	C5	H1	120.9	120.4
C5	C3	C4	119.9	119.7
C3	C5	H1	120.9	120.5
C3	C4	N9	121.3	119.2
N25	C4	N9	121.0	121.7
N25	C23	C21	117.9	119.3
C24	C23	C21	121.5	120.4
C4	N9	C10	119.6	120.6
C23	C21	C10	120.9	118.5
C23	C21	CL2	116.9	120.8
N9	C10	N11	120.6	120.5
C21	C10	N11	120.8	120.5
C10	N11	C12	123.8	120.0
C10	N11	H7	105.8	120.0
N11	C12	C13	107.1	109.5
C12	N11	H7	105.8	120.0
N11	C12	H8	110.0	109.4
N11	C12	H9	110.1	109.4
C12	C13	C14	115.3	109.5
C12	C13	N15	119.4	109.5
C13	C12	H8	110.1	109.5
C13	C12	H9	110.0	109.5
C12	C13	H10	99.0	109.4
C14	C13	N15	117.4	109.5
C13	C14	C30	120.5	120.0
C14	C13	H10	99.2	109.5
C13	N15	C16	124.4	111.0
N15	C13	H10	100.1	109.5
C13	N15	H16	105.6	111.0
C26	C14	C30	118.2	120.0
C26	C27	C28	120.4	120.0
C27	C26	H11	119.7	120.0
C26	C27	H12	119.8	120.0
C14	C30	C29	121.3	120.0
C14	C30	H15	119.4	120.0
N15	C16	C17	114.5	109.5
C16	N15	H16	105.6	111.0
N15	C16	H18	108.2	109.5
N15	C16	H19	108.2	109.4
C27	C28	C29	119.6	120.0
C28	C27	H12	119.8	120.0
C27	C28	H13	120.2	120.0
C30	C29	H14	120.0	120.0
C16	C17	C18	114.1	109.5
C17	C16	H18	108.2	109.5
C17	C16	H19	108.2	109.5
C16	C17	H20	108.3	109.5
C16	C17	H21	108.3	109.4
C29	C28	H13	120.2	120.0
C28	C29	H14	120.1	120.0
C17	C18	C19	111.6	109.4
C18	C17	H20	108.3	109.5
C18	C17	H21	108.3	109.5
C17	C18	H22	108.9	109.5
C17	C18	H23	108.9	109.4
C36	C35	C34	120.0	120.0
C35	C36	H26	119.7	120.0
C36	C35	H27	120.0	120.0
C36	C31	C32	119.1	120.0
C18	C19	C31	113.7	109.4
C19	C18	H22	108.9	109.5
C19	C18	H23	108.9	109.5
C18	C19	H24	108.4	109.5
C18	C19	H25	108.4	109.4
C35	C34	C33	119.8	120.0
C34	C35	H27	120.0	120.0
C35	C34	H28	120.1	120.0
C19	C31	C32	119.6	120.0
C31	C19	H24	108.4	109.5
C31	C19	H25	108.4	109.5
C31	C32	C33	120.6	120.0
C31	C32	H30	119.7	120.0
C33	C34	H28	120.1	120.0
C34	C33	H29	120.0	120.0
C32	C33	H29	120.1	120.0
H4	C24	H5	109.5	109.4
H4	C24	H6	109.5	109.5
H5	C24	H6	109.5	109.4
H8	C12	H9	109.5	109.5
H18	C16	H19	109.5	109.5
H20	C17	H21	109.5	109.5
H22	C18	H23	109.5	109.5
H24	C19	H25	109.5	109.5

Torsion Angles for 1AY

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CL8	C7	C6	H2	359.0	0.0
C1	C7	C6	H2	181.7	180.5
C7	C6	C5	H1	178.6	180.0
N2	C3	C5	H1	180.4	179.7
N2	C3	C4	N9	181.9	0.3
C6	C5	C3	C4	179.7	180.0
C3	C5	C6	H1	180.0	180.0
C6	C5	C3	H1	180.0	180.0
C5	C3	C4	N9	2.6	180.0
C4	C3	C5	H1	359.7	0.0
N25	C4	C3	N9	178.5	180.2
C3	C4	N9	C10	179.4	180.0
C3	C4	N25	N9	181.5	179.7
N25	C4	N9	C10	1.0	359.8
C23	N25	C4	N9	359.3	0.2
C24	C23	N25	C21	178.9	180.0
N25	C23	C21	C10	359.5	359.7
N25	C23	C21	CL2	178.6	180.0
N25	C23	C24	C21	181.2	180.0
C24	C23	C21	C10	180.6	179.7
C24	C23	C21	CL2	359.7	360.0
C4	N9	C10	N11	179.5	180.0
C23	C21	C10	N11	180.2	180.3
C23	C21	C10	N9	0.7	0.3
C21	C10	N9	N11	179.5	180.0
N9	C10	N11	C12	358.7	359.9
N9	C10	N11	H7	120.6	180.0
C23	C21	C10	CL2	179.0	180.3
N9	C10	C21	N11	180.5	180.0
C21	C10	N11	C12	179.1	180.0
C21	C10	N11	H7	301.1	0.0
C23	C21	CL2	C10	180.9	179.7
CL2	C21	C10	N11	1.2	0.0
C10	N11	C12	C13	171.4	180.0
C12	N11	C10	H7	238.1	179.9
C10	N11	C12	H8	291.1	300.1
C10	N11	C12	H9	51.8	60.0
C10	N11	C12	H7	122.0	180.1
N11	C12	C13	C14	81.3	185.0
N11	C12	C13	N15	229.6	305.0
C13	C12	N11	H8	240.4	240.0
C13	C12	N11	H9	119.6	120.0
N11	C12	C13	H10	336.6	65.0
H8	C12	N11	H9	239.3	240.1
C13	C12	N11	H7	49.5	360.0
N11	C12	C13	H8	119.6	120.0
N11	C12	C13	H9	240.4	240.0
C14	C13	C12	N15	211.7	240.0
C12	C13	C14	C30	99.0	260.0
C14	C13	C12	H10	104.7	120.0
C12	C13	N15	C16	105.5	155.0
N15	C13	C12	H10	253.0	240.0
C12	C13	N15	H16	227.6	278.9
H8	C12	C13	H9	120.8	120.1
C12	C13	C14	N15	149.0	120.0
C14	C13	C12	H8	321.7	65.0
C14	C13	C12	H9	200.9	305.0
C12	C13	C14	H10	255.5	240.0
C14	C13	N15	C16	253.2	275.0
N15	C13	C14	H10	106.5	120.0
C14	C13	N15	H16	15.2	38.9
C26	C14	C13	C30	178.5	180.3
C13	C14	C30	C29	179.6	179.8
C13	C14	C30	H15	359.7	0.0
C12	C13	N15	C14	212.3	240.0
N15	C13	C12	H8	110.0	185.0
N15	C13	C12	H9	349.2	65.0
C12	C13	N15	H10	106.4	120.0
N15	C13	C14	C30	310.1	140.0
C14	C13	N15	H10	254.0	240.0
C13	N15	C16	C17	155.8	180.0
C16	N15	C13	H16	238.0	236.0
C13	N15	C16	H18	276.5	300.0
C13	N15	C16	H19	35.0	60.0
C26	C14	C13	N15	128.5	320.3
C13	C14	C26	C30	181.5	179.7
C26	C14	C13	H10	22.1	200.2
C26	C14	C30	C29	1.1	359.5
C26	C14	C30	H15	181.2	179.8
C27	C26	C14	C30	358.9	0.3
C26	C27	C28	C29	359.9	360.0
C28	C27	C26	H12	180.0	179.9
C26	C27	C28	H13	179.9	180.0
C30	C14	C13	N15	310.1	140.0
C30	C14	C13	H10	203.6	20.0
C14	C30	C29	H14	179.4	180.3
C16	N15	C13	H10	359.1	35.0
C13	N15	C16	H16	122.0	124.0
N15	C16	C17	C18	303.5	180.0
C17	C16	N15	H18	239.3	240.0
C17	C16	N15	H19	120.7	120.0
N15	C16	C17	H20	64.1	300.0
N15	C16	C17	H21	182.8	60.0
H18	C16	N15	H19	241.5	240.0
C28	C27	C26	H11	180.6	180.0
C26	C27	C28	H12	180.0	180.1
C29	C28	C27	H13	180.0	180.0
C27	C28	C29	H14	180.1	179.9
C14	C30	C29	H15	180.0	180.2
C30	C29	C28	H13	180.1	179.8
C28	C29	C30	H14	180.0	180.1
C17	C16	N15	H16	33.7	56.0
N15	C16	C17	H18	120.7	120.0
N15	C16	C17	H19	239.3	240.0
C16	C17	C18	C19	134.5	180.0
C18	C17	C16	H20	239.3	240.0
C18	C17	C16	H21	120.7	120.0
C16	C17	C18	H22	254.8	300.0
C16	C17	C18	H23	14.2	60.1
H18	C16	C17	H19	118.5	120.0
H20	C17	C16	H21	241.4	240.0
C14	C30	C29	C28	359.4	0.4
C29	C28	C27	H12	179.9	179.9
C27	C28	C29	H13	180.0	180.0
C30	C29	C28	H14	180.0	179.9
C18	C17	C16	H18	182.7	60.0
C18	C17	C16	H19	64.2	300.0
C16	C17	C18	H20	120.7	120.0
C16	C17	C18	H21	239.3	240.0
C17	C18	C19	C31	222.4	180.0
C19	C18	C17	H22	239.7	240.0
C19	C18	C17	H23	120.3	120.0
C17	C18	C19	H24	343.0	300.0
C17	C18	C19	H25	101.8	60.0
H20	C17	C18	H21	118.6	120.0
H22	C18	C17	H23	240.6	239.9
C35	C36	C31	C32	1.0	0.3
C36	C35	C34	C33	0.2	0.0
C34	C35	C36	H27	180.0	180.0
C36	C35	C34	H28	180.2	180.0
C19	C31	C36	C32	179.0	179.7
C36	C31	C19	H24	293.1	150.3
C36	C31	C19	H25	174.3	30.2
C36	C31	C32	C33	358.9	359.5
C36	C31	C32	H30	179.0	179.7
C19	C18	C17	H20	13.8	60.0
C19	C18	C17	H21	255.2	300.0
C17	C18	C19	H22	120.3	120.0
C17	C18	C19	H23	239.7	240.1
C18	C19	C31	C32	232.6	90.0
C31	C19	C18	H24	239.4	240.0
C31	C19	C18	H25	120.6	120.0
H22	C18	C19	H23	119.3	120.1
H24	C19	C18	H25	241.2	240.0
C34	C35	C36	H26	179.4	180.0
C36	C35	C34	H27	180.0	180.0
C33	C34	C35	H28	180.0	180.0
C35	C34	C33	H29	179.7	179.9
C36	C31	C19	C32	181.1	180.3
C31	C19	C18	H22	102.1	60.0
C31	C19	C18	H23	342.8	300.0
C18	C19	C31	H24	120.6	120.0
C18	C19	C31	H25	239.4	240.1
C19	C31	C32	C33	180.0	179.7
C19	C31	C32	H30	360.0	0.0
H24	C19	C31	H25	118.7	120.1
C32	C31	C19	H24	112.0	330.0
C32	C31	C19	H25	353.3	209.9
C31	C32	C33	H29	180.7	180.3
C33	C34	C35	H27	180.2	180.0
C35	C34	C33	H28	180.0	180.0
C31	C32	C33	C34	0.7	0.5
C32	C33	C34	H29	180.0	179.8
C31	C32	C33	H30	180.0	180.3
C32	C33	C34	H28	179.7	179.8
C34	C33	C32	H29	180.0	180.2
H1	C5	C3	C4	359.7	0.0
H2	C6	C5	H1	358.6	360.0
H4	C24	C23	C21	178.8	270.0
H5	C24	H4	H6	120.0	119.9
H5	C24	C23	C21	298.8	30.0
H4	C24	H5	H6	240.0	240.1
H6	C24	C23	C21	58.8	150.0
H4	C24	H6	H5	120.0	119.9
C10	N11	H7	C12	227.1	179.9
H7	N11	C12	C13	49.5	360.0
H7	N11	C12	H8	169.1	120.0
H7	N11	C12	H9	289.9	239.9
N11	C12	H8	C13	242.2	240.0
H8	C12	N11	H7	169.1	120.0
N11	C12	H8	H9	121.1	119.9
H8	C12	C13	C14	321.7	65.0
H8	C12	C13	N15	110.0	185.0
C13	C12	H8	H9	238.9	239.9
H8	C12	C13	H10	217.0	305.0
N11	C12	H9	C13	117.8	120.0
H9	C12	N11	H7	289.9	239.9
N11	C12	H9	H8	238.9	240.1
H9	C12	C13	C14	200.9	305.0
H9	C12	C13	N15	349.2	65.0
C13	C12	H9	H8	121.1	120.1
H9	C12	C13	H10	96.2	185.0
C12	C13	H10	C14	117.6	120.0
C12	C13	H10	N15	237.8	240.0
H10	C13	C12	H8	217.0	305.0
H10	C13	C12	H9	96.2	185.0
C14	C13	H10	N15	120.2	120.0
H10	C13	C14	C30	203.6	20.0
H10	C13	N15	C16	359.1	35.0
H10	C13	N15	H16	121.2	159.0
H11	C26	C14	C30	178.9	180.2
H11	C26	C27	C28	180.6	180.0
H11	C26	C27	H12	0.6	0.1
C26	C27	H12	C28	180.0	179.9
H12	C27	C26	H11	0.6	0.1
H12	C27	C28	C29	179.9	179.9
H12	C27	C28	H13	360.0	359.9
C27	C28	H13	C29	180.0	180.0
H13	C28	C27	H12	360.0	359.9
H13	C28	C29	H14	0.1	359.9
H14	C29	C28	H13	0.1	359.9
C14	C30	H15	C29	180.0	179.8
H15	C30	C29	H14	359.3	0.0
C13	N15	H16	C16	226.6	236.0
H16	N15	C13	H10	121.2	159.0
H16	N15	C16	C17	33.7	56.0
H16	N15	C16	H18	154.5	176.0
H16	N15	C16	H19	273.0	296.0
N15	C16	H18	C17	235.4	240.0
H18	C16	N15	H16	154.5	176.0
N15	C16	H18	H19	117.7	120.0
H18	C16	C17	C18	182.7	60.0
C17	C16	H18	H19	242.3	240.0
H18	C16	C17	H20	303.4	180.0
H18	C16	C17	H21	62.0	300.0
N15	C16	H19	C17	124.6	120.0
H19	C16	N15	H16	273.0	296.0
N15	C16	H19	H18	242.3	240.0
H19	C16	C17	C18	64.2	300.0
C17	C16	H19	H18	117.7	120.0
H19	C16	C17	H20	184.9	60.0
H19	C16	C17	H21	303.5	180.0
C16	C17	H20	C18	235.8	240.0
H20	C17	C16	H18	303.4	180.0
H20	C17	C16	H19	184.9	60.0
C16	C17	H20	H21	117.9	120.0
H20	C17	C18	C19	13.8	60.0
C18	C17	H20	H21	242.1	240.0
H20	C17	C18	H22	134.1	180.0
H20	C17	C18	H23	253.5	300.1
C16	C17	H21	C18	124.2	120.0
H21	C17	C16	H18	62.0	300.0
H21	C17	C16	H19	303.5	180.0
C16	C17	H21	H20	242.1	240.0
H21	C17	C18	C19	255.2	300.0
C18	C17	H21	H20	117.9	120.0
H21	C17	C18	H22	15.5	60.0
H21	C17	C18	H23	134.9	180.0
C17	C18	H22	C19	238.0	240.0
H22	C18	C17	H20	134.1	180.0
H22	C18	C17	H21	15.5	60.0
C17	C18	H22	H23	119.0	120.0
H22	C18	C19	C31	102.1	60.0
C19	C18	H22	H23	241.0	240.0
H22	C18	C19	H24	222.7	180.0
H22	C18	C19	H25	341.5	300.0
C17	C18	H23	C19	122.0	119.9
H23	C18	C17	H20	253.5	300.1
H23	C18	C17	H21	134.9	180.0
C17	C18	H23	H22	241.0	240.0
H23	C18	C19	C31	342.8	300.0
C19	C18	H23	H22	119.0	120.0
H23	C18	C19	H24	103.4	59.9
H23	C18	C19	H25	222.1	180.0
C18	C19	H24	C31	236.2	240.0
H24	C19	C18	H22	222.7	180.0
H24	C19	C18	H23	103.4	59.9
C18	C19	H24	H25	118.1	120.0
H24	C19	C31	C32	112.0	330.0
C31	C19	H24	H25	241.9	239.9
C18	C19	H25	C31	123.8	120.0
H25	C19	C18	H22	341.5	300.0
H25	C19	C18	H23	222.1	180.0
C18	C19	H25	H24	241.9	240.0
H25	C19	C31	C32	353.3	209.9
C31	C19	H25	H24	118.1	120.1
H26	C36	C35	C34	179.4	180.0
H26	C36	C35	H27	359.4	359.9
H26	C36	C31	C32	181.0	180.3
C36	C35	H27	C34	180.0	180.0
H27	C35	C36	H26	359.4	359.9
H27	C35	C34	C33	180.2	180.0
H27	C35	C34	H28	0.2	0.0
C35	C34	H28	C33	180.0	180.0
H28	C34	C35	H27	0.2	0.0
H28	C34	C33	H29	359.7	360.0
H29	C33	C34	H28	359.7	360.0
C31	C32	H30	C33	180.0	179.7
H30	C32	C33	H29	0.7	0.1