PDB Chemical Component 19Z

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 19Z

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N01 C06 1.312 1.388
N01 C11 1.497 1.465
N01 HN01 1.000 0.970
N02 C10 1.378 1.347
N02 HN02 1.001 0.970
N02 HN0A 1.000 0.970
N03 C09 1.285 1.480
N03 O20 1.331 1.218
N03 O21 1.323 1.217
C04 C05 1.428 1.397
C04 C09 1.428 1.378
C04 H04 1.080 1.080
C05 C06 1.446 1.404
C05 C10 1.384 1.475
C06 C07 1.447 1.390
C07 C08 1.419 1.380
C07 H07 1.080 1.080
C08 C09 1.426 1.386
C08 H08 1.080 1.079
C10 O18 1.213 1.216
C11 C12 1.507 1.508
C11 H11 1.100 1.090
C11 H11A 1.100 1.089
C12 C13 1.427 1.383
C12 C17 1.426 1.382
C13 C14 1.421 1.382
C13 H13 1.080 1.080
C14 C15 1.422 1.387
C14 H14 1.080 1.080
C15 C16 1.427 1.387
C15 O19 1.351 1.359
C16 C17 1.419 1.382
C16 H16 1.080 1.080
C17 H17 1.080 1.080
O19 HO19 0.950 0.967

Bond Angles for 19Z

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C06 N01 C11 124.4 120.0
C06 N01 HN01 104.8 120.0
N01 C06 C05 120.0 120.2
N01 C06 C07 121.4 120.1
C11 N01 HN01 104.7 120.0
N01 C11 C12 110.4 109.5
N01 C11 H11 109.2 109.4
N01 C11 H11A 109.2 109.5
C10 N02 HN02 120.0 120.0
C10 N02 HN0A 120.0 120.0
N02 C10 C05 119.3 120.0
N02 C10 O18 119.1 120.0
HN02 N02 HN0A 120.0 119.9
C09 N03 O20 120.8 119.9
C09 N03 O21 120.6 120.0
N03 C09 C04 120.3 119.8
N03 C09 C08 120.7 119.8
O20 N03 O21 118.6 120.0
C05 C04 C09 121.6 119.9
C05 C04 H04 119.2 120.0
C04 C05 C06 119.4 119.6
C04 C05 C10 118.3 120.2
C09 C04 H04 119.2 120.0
C04 C09 C08 119.0 120.3
C06 C05 C10 122.3 120.2
C05 C06 C07 118.5 119.6
C05 C10 O18 121.6 120.0
C06 C07 C08 121.0 120.0
C06 C07 H07 119.5 120.0
C08 C07 H07 119.5 120.0
C07 C08 C09 120.5 120.4
C07 C08 H08 119.7 119.8
C09 C08 H08 119.8 119.8
C12 C11 H11 109.2 109.4
C12 C11 H11A 109.2 109.5
C11 C12 C13 120.4 120.0
C11 C12 C17 119.6 119.9
H11 C11 H11A 109.8 109.5
C13 C12 C17 120.0 120.1
C12 C13 C14 120.0 120.1
C12 C13 H13 120.0 119.9
C12 C17 C16 120.0 120.0
C12 C17 H17 120.0 120.0
C14 C13 H13 120.0 120.0
C13 C14 C15 120.0 119.9
C13 C14 H14 120.0 120.0
C15 C14 H14 120.0 120.1
C14 C15 C16 120.1 119.9
C14 C15 O19 119.9 120.0
C16 C15 O19 120.0 120.0
C15 C16 C17 120.0 119.9
C15 C16 H16 120.0 120.0
C15 O19 HO19 109.5 114.0
C17 C16 H16 120.0 120.0
C16 C17 H17 120.0 119.9

Torsion Angles for 19Z

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C11 N01 C06 HN01 240.0 180.3
C06 N01 C11 C12 86.5 180.0
C06 N01 C11 H11 206.5 300.0
C06 N01 C11 H11A 326.5 60.0
C04 C05 C06 N01 180.0 179.9
N01 C06 C05 C10 359.7 360.0
C05 C06 N01 C07 179.8 180.0
N01 C06 C07 C08 179.9 180.0
N01 C06 C07 H07 359.9 0.1
C06 N01 C11 HN01 120.0 179.7
C11 N01 C06 C05 171.8 174.4
C11 N01 C06 C07 352.0 354.4
C12 C11 N01 H11 240.0 240.1
C12 C11 N01 H11A 120.0 120.1
N01 C11 C12 C13 59.2 90.0
N01 C11 C12 C17 239.6 269.7
H11 C11 N01 H11A 240.0 240.0
C06 N01 HN01 C11 227.6 180.3
HN01 N01 C06 C05 291.8 354.1
HN01 N01 C06 C07 111.9 174.1
HN01 N01 C11 C12 326.5 0.3
HN01 N01 C11 H11 86.5 120.2
HN01 N01 C11 H11A 206.5 240.3
HN02 N02 C10 HN0A 180.0 180.0
C04 C05 C10 N02 30.5 5.9
C06 C05 C10 N02 210.9 185.8
C05 C10 N02 O18 179.2 180.0
C10 N02 HN02 HN0A 180.0 180.0
HN02 N02 C10 C05 179.2 0.0
HN02 N02 C10 O18 0.0 180.0
C10 N02 HN0A HN02 180.0 180.0
HN0A N02 C10 C05 359.2 180.0
HN0A N02 C10 O18 180.0 360.0
O20 N03 C09 O21 180.0 180.1
C05 C04 C09 N03 180.0 180.0
N03 C09 C04 H04 360.0 0.3
C04 C09 N03 C08 180.0 180.0
C07 C08 C09 N03 180.0 180.0
N03 C09 C08 H08 0.0 0.1
C09 N03 O20 O21 180.0 179.9
O20 N03 C09 C04 0.1 0.0
O20 N03 C09 C08 180.1 180.0
C09 N03 O21 O20 180.0 180.1
O21 N03 C09 C04 180.1 180.0
O21 N03 C09 C08 0.0 359.9
N01 C06 C05 C04 180.0 179.9
N02 C10 C05 C04 30.5 5.9
N03 C09 C04 C05 180.0 180.0
C09 C04 C05 H04 180.0 180.3
C05 C04 C09 C08 360.0 360.0
C06 C05 C04 C10 179.6 180.1
C04 C05 C06 C07 359.9 360.0
C04 C05 C10 O18 209.7 185.9
C04 C09 N03 O20 0.1 0.0
C04 C09 N03 O21 180.1 180.0
N03 C09 C04 C08 180.0 180.0
C05 C04 C09 H04 180.0 179.7
C09 C04 C05 C06 0.1 0.0
C09 C04 C05 C10 180.5 180.0
C07 C08 C09 C04 360.0 360.0
C04 C09 C08 H08 180.0 180.1
C05 C04 H04 C09 180.0 180.3
H04 C04 C05 C06 180.1 179.7
H04 C04 C05 C10 0.4 359.7
H04 C04 C09 C08 180.0 180.3
C05 C06 N01 C11 171.8 174.4
C05 C06 N01 HN01 291.8 354.1
N01 C06 C05 C07 180.2 180.0
N02 C10 C05 C06 210.9 185.8
C06 C05 C04 C09 0.1 0.0
C06 C05 C04 H04 180.1 179.7
C04 C05 C06 C10 180.4 179.9
C06 C05 C10 O18 30.1 5.8
C05 C06 C07 C08 0.1 360.0
C05 C06 C07 H07 180.1 180.0
C05 C10 N02 HN02 179.2 0.0
C05 C10 N02 HN0A 359.2 180.0
N02 C10 C05 O18 180.8 180.0
C10 C05 C04 C09 180.5 180.0
C10 C05 C04 H04 0.4 359.7
C04 C05 C10 C06 179.6 180.1
C10 C05 C06 C07 179.5 180.0
C07 C06 N01 C11 352.0 354.4
C07 C06 N01 HN01 111.9 174.1
N01 C06 C07 C05 179.8 180.0
C07 C06 C05 C10 179.5 180.0
C08 C07 C06 H07 180.0 180.0
C06 C07 C08 C09 360.0 0.0
C06 C07 C08 H08 180.0 180.0
N03 C09 C08 C07 180.0 180.0
C04 C09 C08 C07 360.0 360.0
C06 C07 C08 H07 180.0 180.0
C09 C08 C07 H08 180.0 180.1
C06 C07 H07 C08 180.0 180.0
H07 C07 C08 C09 180.0 180.0
H07 C07 C08 H08 360.0 359.9
C08 C09 N03 O20 180.1 180.0
C08 C09 N03 O21 0.0 359.9
N03 C09 C08 C04 180.0 180.0
C08 C09 C04 H04 180.0 180.3
C09 C08 C07 H07 180.0 180.0
C07 C08 C09 H08 180.0 179.9
H08 C08 C07 H07 360.0 359.9
C07 C08 H08 C09 180.0 180.1
O18 C10 N02 HN02 0.0 180.0
O18 C10 N02 HN0A 180.0 360.0
N02 C10 O18 C05 179.2 180.0
C12 C11 N01 HN01 326.5 0.3
N01 C11 C12 H11 120.0 119.9
N01 C11 C12 H11A 240.0 239.9
H11 C11 C12 H11A 120.0 120.1
C13 C12 C11 C17 179.6 180.3
C11 C12 C13 C14 180.5 180.0
C11 C12 C13 H13 0.5 359.9
C11 C12 C17 C16 179.4 179.8
C11 C12 C17 H17 359.4 360.0
H11 C11 N01 HN01 86.5 120.2
N01 C11 H11 C12 239.2 240.1
N01 C11 H11 H11A 119.6 120.0
C12 C11 H11 H11A 240.4 240.0
H11 C11 C12 C13 299.2 330.1
H11 C11 C12 C17 119.6 149.8
H11A C11 N01 HN01 206.5 240.3
N01 C11 H11A C12 120.8 120.0
N01 C11 H11A H11 240.4 240.0
C12 C11 H11A H11 119.6 120.0
H11A C11 C12 C13 179.2 210.1
H11A C11 C12 C17 359.6 29.8
C13 C12 C11 H11 299.2 330.1
C13 C12 C11 H11A 179.2 210.1
C11 C12 C13 C17 180.5 179.7
C13 C12 C17 C16 359.9 359.5
C13 C12 C17 H17 179.9 179.7
C14 C13 C12 H13 180.0 180.2
C12 C13 C14 C15 0.0 359.9
C12 C13 C14 H14 180.0 180.0
C17 C12 C11 H11 119.6 149.8
C17 C12 C11 H11A 359.6 29.8
C11 C12 C17 C13 179.6 180.3
C17 C12 C13 C14 0.1 0.3
C17 C12 C13 H13 180.1 180.2
C15 C16 C17 C12 0.1 0.5
C12 C17 C16 H16 180.1 180.2
C16 C17 C12 H17 180.0 179.8
C14 C13 C12 C17 0.1 0.3
C12 C13 C14 H13 180.0 179.8
C15 C14 C13 H14 180.0 180.0
C13 C14 C15 C16 360.0 0.0
C13 C14 C15 O19 179.9 180.0
H13 C13 C12 C17 180.1 180.2
C12 C13 H13 C14 180.0 180.2
H13 C13 C14 C15 180.0 180.1
H13 C13 C14 H14 360.0 0.1
C15 C14 C13 H13 180.0 180.1
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 O19 180.1 180.0
C14 C15 C16 C17 0.0 359.7
C14 C15 C16 H16 180.0 180.0
C14 C15 O19 HO19 180.0 90.0
H14 C14 C13 H13 360.0 0.1
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 C16 180.0 180.0
H14 C14 C15 O19 359.9 360.0
C12 C17 C16 C15 0.1 0.5
C16 C15 C14 H14 180.0 180.0
C14 C15 C16 O19 179.9 180.0
C16 C15 O19 HO19 359.9 270.0
C17 C16 C15 H16 180.0 179.7
C15 C16 C17 H17 180.1 180.3
O19 C15 C14 H14 359.9 360.0
C14 C15 O19 C16 180.1 180.0
O19 C15 C16 C17 180.1 179.8
O19 C15 C16 H16 0.1 0.1
C12 C17 C16 H17 180.0 180.2
C17 C16 C15 O19 180.1 179.8
C15 C16 C17 H16 180.0 180.3
H16 C16 C15 O19 0.1 0.1
C15 C16 H16 C17 180.0 179.7
H16 C16 C17 H17 0.1 0.0
C12 C17 H17 C16 180.0 179.8
H17 C17 C16 H16 0.1 0.0