data_15U
# 
_chem_comp.id                                    15U 
_chem_comp.name                                  
;(2R,4R)-4-methyl-1-(N~2~-{[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}-L-arginyl)piperidine-2-carboxylic
acid
;
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H36 N6 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         S-argatroban 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-10-16 
_chem_comp.pdbx_modified_date                    2020-06-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        508.634 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     15U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4HFP 
_chem_comp.pdbx_subcomponent_list                "15Y ARG MCP" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
15U S   S   S 0 1 N N N 2.627  13.756 0.106  0.930  -1.336 -2.070 S    15Y 1  
15U O1  O1  O 0 1 N N N 1.796  12.587 0.188  1.964  -1.580 -1.126 O1   15Y 2  
15U O2  O2  O 0 1 N N N 2.519  14.499 1.336  1.060  -1.622 -3.456 O2   15Y 3  
15U C1  C1  C 0 1 N N N 2.859  12.535 -4.232 0.216  -2.450 2.069  C1   15Y 4  
15U C2  C2  C 0 1 N N S 3.206  13.656 -5.211 -0.421 -3.814 2.359  C2   15Y 5  
15U C3  C3  C 0 1 N N N 2.180  14.779 -5.095 -1.788 -3.852 1.672  C3   15Y 6  
15U C4  C4  C 0 1 Y N N 2.018  15.182 -3.641 -1.655 -3.362 0.252  C4   15Y 7  
15U C5  C5  C 0 1 Y N N 1.504  16.435 -3.308 -2.691 -3.627 -0.630 C5   15Y 8  
15U C6  C6  C 0 1 Y N N 1.357  16.810 -1.970 -2.623 -3.197 -1.940 C6   15Y 9  
15U C7  C7  C 0 1 Y N N 1.709  15.964 -0.914 -1.515 -2.494 -2.378 C7   15Y 10 
15U C8  C8  C 0 1 Y N N 2.227  14.690 -1.137 -0.480 -2.230 -1.507 C8   15Y 11 
15U C9  C9  C 0 1 Y N N 2.410  14.244 -2.548 -0.541 -2.666 -0.183 C9   15Y 12 
15U C10 C10 C 0 1 N N N 3.304  13.130 -6.640 -0.596 -3.993 3.869  C10  15Y 13 
15U N   N   N 0 1 N N N 2.910  13.024 -2.861 0.545  -2.380 0.643  N    15Y 14 
15U N1  N1  N 0 1 N N N 4.146  13.289 -0.092 0.565  0.276  -1.958 N    ARG 15 
15U CA  CA  C 0 1 N N S 5.221  14.265 -0.031 0.347  0.888  -0.645 CA   ARG 16 
15U C   C   C 0 1 N N N 5.782  14.569 -1.402 -0.872 1.773  -0.700 C    ARG 17 
15U O   O   O 0 1 N N N 5.719  13.709 -2.264 -1.255 2.212  -1.763 O    ARG 18 
15U CB  CB  C 0 1 N N N 6.286  13.781 0.959  1.569  1.726  -0.263 CB   ARG 19 
15U CG  CG  C 0 1 N N N 7.159  12.658 0.411  2.800  0.822  -0.175 CG   ARG 20 
15U CD  CD  C 0 1 N N N 8.411  12.495 1.256  4.007  1.646  0.275  CD   ARG 21 
15U NE  NE  N 0 1 N N N 8.707  11.093 1.473  5.186  0.781  0.359  NE   ARG 22 
15U CZ  CZ  C 0 1 N N N 9.512  10.378 0.684  6.397  1.304  0.746  CZ   ARG 23 
15U NH1 NH1 N 0 1 N N N 9.637  9.072  0.924  6.502  2.640  1.054  NH1  ARG 24 
15U NH2 NH2 N 0 1 N N N 10.149 10.912 -0.274 7.446  0.534  0.821  NH2  ARG 25 
15U N2  N2  N 0 1 N N N 6.333  15.765 -1.651 -1.536 2.076  0.433  N    MCP 26 
15U C11 C11 C 0 1 N N R 6.421  16.796 -0.597 -2.800 2.823  0.383  C1   MCP 27 
15U C21 C21 C 0 1 N N N 5.855  18.129 -1.110 -3.869 2.035  1.146  C2   MCP 28 
15U C31 C31 C 0 1 N N R 6.396  18.520 -2.484 -3.368 1.742  2.562  C3   MCP 29 
15U C41 C41 C 0 1 N N N 6.145  17.369 -3.452 -2.099 0.890  2.490  C4   MCP 30 
15U C51 C51 C 0 1 N N N 6.918  16.153 -2.946 -1.013 1.660  1.742  C5   MCP 31 
15U C61 C61 C 0 1 N N N 7.828  16.905 -0.060 -3.228 2.996  -1.052 C6   MCP 32 
15U O11 O11 O 0 1 N N N 8.602  15.936 -0.216 -3.355 2.029  -1.765 O1   MCP 33 
15U O21 O21 O 0 1 N N N 8.178  17.951 0.530  -3.468 4.224  -1.537 O2   MCP 34 
15U C71 C71 C 0 1 N N N 5.805  19.833 -2.986 -3.057 3.060  3.275  C7   MCP 35 
15U H1  H1  H 0 1 N N N 1.845  12.166 -4.448 -0.487 -1.656 2.322  H1   15Y 36 
15U H2  H2  H 0 1 N N N 3.581  11.714 -4.351 1.125  -2.335 2.659  H2   15Y 37 
15U H3  H3  H 0 1 N N N 4.189  14.062 -4.929 0.212  -4.609 1.965  H3   15Y 38 
15U H4  H4  H 0 1 N N N 2.522  15.647 -5.678 -2.165 -4.875 1.670  H4   15Y 39 
15U H5  H5  H 0 1 N N N 1.213  14.431 -5.487 -2.484 -3.211 2.213  H5   15Y 40 
15U H6  H6  H 0 1 N N N 1.217  17.121 -4.091 -3.558 -4.174 -0.290 H6   15Y 41 
15U H7  H7  H 0 1 N N N 0.958  17.788 -1.744 -3.434 -3.408 -2.622 H7   15Y 42 
15U H8  H8  H 0 1 N N N 1.576  16.307 0.101  -1.461 -2.155 -3.402 H8   15Y 43 
15U H9  H9  H 0 1 N N N 4.051  12.324 -6.684 -1.074 -4.952 4.069  H9   15Y 44 
15U H10 H10 H 0 1 N N N 2.325  12.740 -6.955 0.380  -3.965 4.353  H10  15Y 45 
15U H11 H11 H 0 1 N N N 3.606  13.947 -7.311 -1.219 -3.188 4.260  H11  15Y 46 
15U H12 H12 H 0 1 N N N 2.416  12.359 -2.301 0.952  -1.487 0.410  H12  15Y 47 
15U H13 H13 H 0 1 N N N 4.200  12.856 -0.992 0.496  0.815  -2.762 H    ARG 48 
15U H14 H14 H 0 1 N N N 4.809  15.203 0.370  0.195  0.106  0.099  HA   ARG 49 
15U H15 H15 H 0 1 N N N 6.934  14.632 1.217  1.734  2.493  -1.020 HB2  ARG 50 
15U H16 H16 H 0 1 N N N 5.780  13.418 1.865  1.396  2.200  0.703  HB3  ARG 51 
15U H17 H17 H 0 1 N N N 6.589  11.717 0.424  2.615  0.025  0.545  HG2  ARG 52 
15U H18 H18 H 0 1 N N N 7.449  12.897 -0.623 3.002  0.386  -1.154 HG3  ARG 53 
15U H19 H19 H 0 1 N N N 9.259  12.967 0.738  4.192  2.443  -0.446 HD2  ARG 54 
15U H20 H20 H 0 1 N N N 8.256  12.985 2.228  3.806  2.082  1.253  HD3  ARG 55 
15U H21 H21 H 0 1 N N N 8.285  10.636 2.256  5.112  -0.162 0.142  HE   ARG 56 
15U H22 H22 H 0 1 N N N 9.134  8.652  1.680  5.721  3.213  0.998  HH11 ARG 57 
15U H23 H23 H 0 1 N N N 10.233 8.513  0.348  7.356  3.009  1.327  HH12 ARG 58 
15U H24 H24 H 0 1 N N N 9.967  11.893 -0.344 7.372  -0.409 0.604  HH21 ARG 59 
15U H26 H26 H 0 1 N N N 5.779  16.475 0.236  -2.665 3.801  0.844  H1   MCP 60 
15U H27 H27 H 0 1 N N N 6.117  18.920 -0.392 -4.786 2.622  1.199  H21  MCP 61 
15U H28 H28 H 0 1 N N N 4.760  18.042 -1.176 -4.068 1.096  0.629  H22  MCP 62 
15U H29 H29 H 0 1 N N N 7.484  18.653 -2.392 -4.137 1.203  3.115  H3   MCP 63 
15U H30 H30 H 0 1 N N N 6.496  17.643 -4.458 -1.754 0.661  3.498  H41  MCP 64 
15U H31 H31 H 0 1 N N N 5.070  17.139 -3.489 -2.318 -0.037 1.961  H42  MCP 65 
15U H32 H32 H 0 1 N N N 6.826  15.324 -3.663 -0.141 1.020  1.602  H51  MCP 66 
15U H33 H33 H 0 1 N N N 7.980  16.410 -2.817 -0.731 2.544  2.314  H52  MCP 67 
15U H34 H34 H 0 1 N N N 9.081  17.868 0.814  -3.740 4.285  -2.463 HO2  MCP 68 
15U H35 H35 H 0 1 N N N 6.011  20.631 -2.257 -3.960 3.667  3.327  H71  MCP 69 
15U H36 H36 H 0 1 N N N 6.260  20.094 -3.953 -2.700 2.852  4.284  H72  MCP 70 
15U H37 H37 H 0 1 N N N 4.718  19.722 -3.111 -2.288 3.600  2.721  H73  MCP 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
15U C10 C2  SING N N 1  
15U C2  C3  SING N N 2  
15U C2  C1  SING N N 3  
15U C3  C4  SING N N 4  
15U C1  N   SING N N 5  
15U C4  C5  DOUB Y N 6  
15U C4  C9  SING Y N 7  
15U C41 C51 SING N N 8  
15U C41 C31 SING N N 9  
15U C5  C6  SING Y N 10 
15U C71 C31 SING N N 11 
15U C51 N2  SING N N 12 
15U N   C9  SING N N 13 
15U C9  C8  DOUB Y N 14 
15U C31 C21 SING N N 15 
15U O   C   DOUB N N 16 
15U C6  C7  DOUB Y N 17 
15U N2  C   SING N N 18 
15U N2  C11 SING N N 19 
15U C   CA  SING N N 20 
15U C8  C7  SING Y N 21 
15U C8  S   SING N N 22 
15U C21 C11 SING N N 23 
15U C11 C61 SING N N 24 
15U NH2 CZ  DOUB N N 25 
15U O11 C61 DOUB N N 26 
15U N1  CA  SING N N 27 
15U N1  S   SING N N 28 
15U C61 O21 SING N N 29 
15U CA  CB  SING N N 30 
15U S   O1  DOUB N N 31 
15U S   O2  DOUB N N 32 
15U CG  CB  SING N N 33 
15U CG  CD  SING N N 34 
15U CZ  NH1 SING N N 35 
15U CZ  NE  SING N N 36 
15U CD  NE  SING N N 37 
15U C1  H1  SING N N 38 
15U C1  H2  SING N N 39 
15U C2  H3  SING N N 40 
15U C3  H4  SING N N 41 
15U C3  H5  SING N N 42 
15U C5  H6  SING N N 43 
15U C6  H7  SING N N 44 
15U C7  H8  SING N N 45 
15U C10 H9  SING N N 46 
15U C10 H10 SING N N 47 
15U C10 H11 SING N N 48 
15U N   H12 SING N N 49 
15U N1  H13 SING N N 50 
15U CA  H14 SING N N 51 
15U CB  H15 SING N N 52 
15U CB  H16 SING N N 53 
15U CG  H17 SING N N 54 
15U CG  H18 SING N N 55 
15U CD  H19 SING N N 56 
15U CD  H20 SING N N 57 
15U NE  H21 SING N N 58 
15U NH1 H22 SING N N 59 
15U NH1 H23 SING N N 60 
15U NH2 H24 SING N N 61 
15U C11 H26 SING N N 62 
15U C21 H27 SING N N 63 
15U C21 H28 SING N N 64 
15U C31 H29 SING N N 65 
15U C41 H30 SING N N 66 
15U C41 H31 SING N N 67 
15U C51 H32 SING N N 68 
15U C51 H33 SING N N 69 
15U O21 H34 SING N N 70 
15U C71 H35 SING N N 71 
15U C71 H36 SING N N 72 
15U C71 H37 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
15U SMILES           ACDLabs              12.01 "O=C(N1C(C(=O)O)CC(C)CC1)C(NS(=O)(=O)c3cccc2c3NCC(C)C2)CCCNC(=[N@H])N" 
15U InChI            InChI                1.03  
"InChI=1S/C23H36N6O5S/c1-14-8-10-29(18(12-14)22(31)32)21(30)17(6-4-9-26-23(24)25)28-35(33,34)19-7-3-5-16-11-15(2)13-27-20(16)19/h3,5,7,14-15,17-18,27-28H,4,6,8-13H2,1-2H3,(H,31,32)(H4,24,25,26)/t14-,15+,17+,18-/m1/s1" 
15U InChIKey         InChI                1.03  KXNPVXPOPUZYGB-MXSMSXNCSA-N 
15U SMILES_CANONICAL CACTVS               3.370 "C[C@@H]1CCN([C@H](C1)C(O)=O)C(=O)[C@H](CCCNC(N)=N)N[S](=O)(=O)c2cccc3C[C@H](C)CNc23" 
15U SMILES           CACTVS               3.370 "C[CH]1CCN([CH](C1)C(O)=O)C(=O)[CH](CCCNC(N)=N)N[S](=O)(=O)c2cccc3C[CH](C)CNc23" 
15U SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(\N)/NCCC[C@@H](C(=O)N1CC[C@H](C[C@@H]1C(=O)O)C)NS(=O)(=O)c2cccc3c2NC[C@H](C3)C" 
15U SMILES           "OpenEye OEToolkits" 1.7.6 "CC1CCN(C(C1)C(=O)O)C(=O)C(CCCNC(=N)N)NS(=O)(=O)c2cccc3c2NCC(C3)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
15U "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,4R)-4-methyl-1-(N~2~-{[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}-L-arginyl)piperidine-2-carboxylic acid"                          
15U "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,4R)-1-[(2S)-5-carbamimidamido-2-[[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonylamino]pentanoyl]-4-methyl-piperidine-2-carboxylic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      15U 
_pdbx_chem_comp_synonyms.name         S-argatroban 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
15U "Create component" 2012-10-16 RCSB 
15U "Initial release"  2013-03-13 RCSB 
15U "Modify synonyms"  2020-06-05 PDBE 
# 
