PDB Chemical Component 13P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 13P
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
P |
O1P |
1.596 |
1.480 |
P |
O2P |
1.580 |
1.610 |
P |
O3P |
1.557 |
1.609 |
P |
O1 |
1.607 |
1.609 |
O2P |
HOP2 |
1.002 |
0.967 |
O3P |
HOP3 |
0.950 |
0.968 |
O1 |
C1 |
1.426 |
1.427 |
C1 |
C2 |
1.507 |
1.507 |
C1 |
H11 |
1.114 |
1.090 |
C1 |
H12 |
1.115 |
1.090 |
C2 |
O2 |
1.231 |
1.207 |
C2 |
C3 |
1.517 |
1.506 |
C3 |
O3 |
1.416 |
1.430 |
C3 |
H31 |
1.115 |
1.090 |
C3 |
H32 |
1.115 |
1.090 |
O3 |
HO3 |
0.965 |
0.967 |
Bond Angles for 13P
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1P |
P |
O2P |
106.6 |
109.4 |
O1P |
P |
O3P |
108.7 |
109.4 |
O1P |
P |
O1 |
108.5 |
109.4 |
O2P |
P |
O3P |
109.2 |
109.5 |
O2P |
P |
O1 |
112.8 |
109.5 |
P |
O2P |
HOP2 |
105.5 |
106.8 |
O3P |
P |
O1 |
110.8 |
109.5 |
P |
O3P |
HOP3 |
108.8 |
106.7 |
P |
O1 |
C1 |
118.7 |
106.8 |
O1 |
C1 |
C2 |
106.1 |
109.5 |
O1 |
C1 |
H11 |
113.5 |
109.5 |
O1 |
C1 |
H12 |
113.5 |
109.5 |
C2 |
C1 |
H11 |
113.5 |
109.5 |
C2 |
C1 |
H12 |
113.5 |
109.4 |
C1 |
C2 |
O2 |
119.9 |
119.9 |
C1 |
C2 |
C3 |
119.9 |
120.1 |
H11 |
C1 |
H12 |
97.0 |
109.4 |
O2 |
C2 |
C3 |
120.1 |
120.0 |
C2 |
C3 |
O3 |
108.9 |
109.5 |
C2 |
C3 |
H31 |
112.4 |
109.5 |
C2 |
C3 |
H32 |
112.5 |
109.5 |
O3 |
C3 |
H31 |
112.4 |
109.5 |
O3 |
C3 |
H32 |
112.4 |
109.4 |
C3 |
O3 |
HO3 |
111.4 |
106.8 |
H31 |
C3 |
H32 |
97.9 |
109.4 |
Torsion Angles for 13P
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2P |
P |
O1P |
O3P |
117.7 |
120.0 |
O2P |
P |
O1P |
O1 |
238.2 |
240.0 |
O1P |
P |
O2P |
HOP2 |
283.4 |
300.0 |
O3P |
P |
O1P |
O1 |
120.6 |
120.0 |
O1P |
P |
O3P |
HOP3 |
180.0 |
180.0 |
O1P |
P |
O1 |
C1 |
150.9 |
60.1 |
O1P |
P |
O2P |
O3P |
242.7 |
240.0 |
O1P |
P |
O2P |
O1 |
119.0 |
119.9 |
O3P |
P |
O2P |
O1 |
236.3 |
239.9 |
O2P |
P |
O3P |
HOP3 |
64.0 |
60.0 |
O2P |
P |
O1 |
C1 |
268.8 |
180.0 |
O1P |
P |
O3P |
O2P |
116.0 |
119.9 |
O1P |
P |
O3P |
O1 |
240.9 |
240.0 |
O2P |
P |
O3P |
O1 |
124.9 |
120.1 |
O3P |
P |
O2P |
HOP2 |
40.7 |
59.9 |
O3P |
P |
O1 |
C1 |
31.6 |
300.1 |
O1P |
P |
O1 |
O2P |
242.1 |
240.1 |
O1P |
P |
O1 |
O3P |
119.3 |
120.0 |
O2P |
P |
O1 |
O3P |
237.1 |
239.9 |
O1 |
P |
O2P |
HOP2 |
164.4 |
180.0 |
O1 |
P |
O3P |
HOP3 |
299.1 |
299.9 |
P |
O1 |
C1 |
C2 |
107.0 |
180.0 |
P |
O1 |
C1 |
H11 |
232.2 |
59.9 |
P |
O1 |
C1 |
H12 |
341.7 |
300.0 |
HOP2 |
O2P |
P |
O3P |
40.7 |
59.9 |
HOP2 |
O2P |
P |
O1 |
164.4 |
180.0 |
HOP3 |
O3P |
P |
O1 |
299.1 |
299.9 |
C2 |
C1 |
O1 |
H11 |
234.7 |
120.1 |
C2 |
C1 |
O1 |
H12 |
125.2 |
240.0 |
O1 |
C1 |
C2 |
O2 |
106.0 |
359.9 |
O1 |
C1 |
C2 |
C3 |
285.3 |
180.0 |
H11 |
C1 |
O1 |
H12 |
250.5 |
119.9 |
O1 |
C1 |
C2 |
H11 |
125.3 |
239.9 |
O1 |
C1 |
C2 |
H12 |
234.8 |
120.0 |
H11 |
C1 |
C2 |
H12 |
109.5 |
240.1 |
O2 |
C2 |
C1 |
C3 |
180.7 |
179.9 |
C1 |
C2 |
C3 |
O3 |
177.6 |
180.0 |
C1 |
C2 |
C3 |
H31 |
302.8 |
59.9 |
C1 |
C2 |
C3 |
H32 |
52.3 |
299.9 |
O1 |
C1 |
H11 |
C2 |
238.8 |
120.1 |
O1 |
C1 |
H11 |
H12 |
119.4 |
240.0 |
C2 |
C1 |
H11 |
H12 |
240.6 |
119.9 |
H11 |
C1 |
C2 |
O2 |
340.7 |
120.0 |
H11 |
C1 |
C2 |
C3 |
160.1 |
300.1 |
O1 |
C1 |
H12 |
C2 |
121.2 |
240.0 |
O1 |
C1 |
H12 |
H11 |
240.6 |
120.0 |
C2 |
C1 |
H12 |
H11 |
119.4 |
240.1 |
H12 |
C1 |
C2 |
O2 |
231.2 |
239.9 |
H12 |
C1 |
C2 |
C3 |
50.6 |
60.0 |
O2 |
C2 |
C1 |
H11 |
340.7 |
120.0 |
O2 |
C2 |
C1 |
H12 |
231.2 |
239.9 |
C1 |
C2 |
O2 |
C3 |
179.3 |
180.1 |
O2 |
C2 |
C3 |
O3 |
356.9 |
0.1 |
O2 |
C2 |
C3 |
H31 |
122.2 |
240.0 |
O2 |
C2 |
C3 |
H32 |
231.6 |
120.0 |
C3 |
C2 |
C1 |
H11 |
160.1 |
300.1 |
C3 |
C2 |
C1 |
H12 |
50.6 |
60.0 |
C1 |
C2 |
C3 |
O2 |
180.7 |
179.9 |
O3 |
C3 |
C2 |
H31 |
234.7 |
120.0 |
O3 |
C3 |
C2 |
H32 |
125.3 |
240.0 |
C2 |
C3 |
O3 |
HO3 |
96.5 |
180.0 |
H31 |
C3 |
C2 |
H32 |
250.6 |
120.0 |
C2 |
C3 |
O3 |
H31 |
125.3 |
239.9 |
C2 |
C3 |
O3 |
H32 |
234.7 |
120.0 |
H31 |
C3 |
O3 |
H32 |
109.4 |
240.1 |
C2 |
C3 |
H31 |
O3 |
236.7 |
120.1 |
C2 |
C3 |
H31 |
H32 |
118.4 |
240.0 |
O3 |
C3 |
H31 |
H32 |
241.7 |
119.9 |
H31 |
C3 |
O3 |
HO3 |
331.2 |
300.1 |
C2 |
C3 |
H32 |
O3 |
123.4 |
240.0 |
C2 |
C3 |
H32 |
H31 |
241.7 |
120.1 |
O3 |
C3 |
H32 |
H31 |
118.3 |
240.1 |
H32 |
C3 |
O3 |
HO3 |
221.8 |
60.0 |
HO3 |
O3 |
C3 |
H31 |
331.2 |
300.1 |
HO3 |
O3 |
C3 |
H32 |
221.8 |
60.0 |