PDB Chemical Component 129

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 129

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
P O1P 1.539 1.480
P O2P 1.536 1.611
P O3P 1.538 1.609
P C4 1.800 1.823
O2P HOP2 0.950 0.967
O3P HOP3 0.950 0.967
C4 C3 1.544 1.529
C4 H41 1.115 1.090
C4 H42 1.116 1.089
C3 N2 1.471 1.465
C3 H31 1.115 1.091
C3 H32 1.114 1.089
N2 C1 1.307 1.347
N2 O2 1.401 1.415
C1 O1 1.209 1.212
C1 H1 1.103 1.080
O2 HO2 0.950 0.967

Bond Angles for 129

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1P P O2P 109.1 109.4
O1P P O3P 109.7 109.5
O1P P C4 109.7 109.5
O2P P O3P 113.5 109.4
O2P P C4 107.5 109.4
P O2P HOP2 109.1 106.8
O3P P C4 107.2 109.5
P O3P HOP3 109.7 106.8
P C4 C3 111.3 109.4
P C4 H41 111.5 109.5
P C4 H42 111.5 109.5
C3 C4 H41 111.6 109.5
C3 C4 H42 111.5 109.5
C4 C3 N2 104.7 109.4
C4 C3 H31 114.0 109.4
C4 C3 H32 114.0 109.5
H41 C4 H42 98.8 109.4
N2 C3 H31 114.0 109.5
N2 C3 H32 114.0 109.5
C3 N2 C1 127.2 120.0
C3 N2 O2 115.9 120.0
H31 C3 H32 96.5 109.5
C1 N2 O2 114.1 120.0
N2 C1 O1 120.6 120.0
N2 C1 H1 123.6 119.9
N2 O2 HO2 115.9 106.8
O1 C1 H1 115.8 120.0

Torsion Angles for 129

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2P P O1P O3P 125.0 119.9
O2P P O1P C4 242.5 240.1
O1P P O2P HOP2 180.0 300.0
O3P P O1P C4 117.5 120.1
O1P P O3P HOP3 180.1 179.9
O1P P C4 C3 154.3 60.0
O1P P C4 H41 279.7 300.1
O1P P C4 H42 29.1 180.1
O1P P O2P O3P 237.3 240.0
O1P P O2P C4 118.9 120.0
O3P P O2P C4 241.6 240.0
O2P P O3P HOP3 57.7 60.0
O2P P C4 C3 272.9 180.0
O2P P C4 H41 38.2 60.0
O2P P C4 H42 147.6 300.0
O1P P O3P O2P 122.4 119.9
O1P P O3P C4 240.9 239.9
O2P P O3P C4 118.6 120.0
O3P P O2P HOP2 302.7 60.0
O3P P C4 C3 35.3 299.9
O3P P C4 H41 160.6 180.0
O3P P C4 H42 270.0 60.0
O1P P C4 O2P 241.5 240.1
O1P P C4 O3P 119.1 120.1
O2P P C4 O3P 237.6 240.0
C4 P O2P HOP2 61.1 180.0
C4 P O3P HOP3 299.1 300.0
C3 C4 P H41 234.7 120.0
C3 C4 P H42 125.3 239.9
P C4 C3 N2 192.6 180.0
P C4 C3 H31 317.8 60.0
P C4 C3 H32 67.3 300.0
H41 C4 P H42 250.6 120.0
HOP2 O2P P O3P 302.7 60.0
HOP2 O2P P C4 61.1 180.0
HOP3 O3P P C4 299.1 300.0
P C4 C3 H41 125.3 240.1
P C4 C3 H42 234.7 120.1
H41 C4 C3 H42 109.4 240.0
N2 C3 C4 H31 234.8 119.9
N2 C3 C4 H32 125.3 239.9
C4 C3 N2 C1 120.5 90.1
C4 C3 N2 O2 320.8 270.0
H31 C3 C4 H32 250.5 120.0
P C4 H41 C3 234.8 119.9
P C4 H41 H42 117.4 240.0
C3 C4 H41 H42 242.6 120.1
H41 C4 C3 N2 67.3 299.9
H41 C4 C3 H31 192.5 180.0
H41 C4 C3 H32 302.0 60.0
P C4 H42 C3 125.2 240.0
P C4 H42 H41 242.6 120.0
C3 C4 H42 H41 117.4 240.0
H42 C4 C3 N2 317.9 59.9
H42 C4 C3 H31 83.1 300.0
H42 C4 C3 H32 192.6 180.0
N2 C3 C4 H41 67.3 299.9
N2 C3 C4 H42 317.9 59.9
C4 C3 N2 H31 125.2 240.1
C4 C3 N2 H32 234.7 120.1
H31 C3 N2 H32 109.5 240.0
C1 N2 C3 O2 159.7 180.1
C3 N2 C1 O1 199.6 179.9
C3 N2 C1 H1 19.6 360.0
C3 N2 O2 HO2 180.0 180.0
H31 C3 C4 H41 192.5 180.0
H31 C3 C4 H42 83.1 300.0
C4 C3 H31 N2 239.9 119.9
C4 C3 H31 H32 120.0 240.0
N2 C3 H31 H32 240.1 120.1
H31 C3 N2 C1 355.3 210.0
H31 C3 N2 O2 195.6 29.9
H32 C3 C4 H41 302.0 60.0
H32 C3 C4 H42 192.6 180.0
C4 C3 H32 N2 120.2 240.0
C4 C3 H32 H31 240.1 120.0
N2 C3 H32 H31 119.9 240.0
H32 C3 N2 C1 245.8 330.0
H32 C3 N2 O2 86.1 149.9
C1 N2 C3 H31 355.3 210.0
C1 N2 C3 H32 245.8 330.0
C3 N2 C1 O2 200.0 179.9
C1 N2 O2 HO2 17.6 360.0
O1 C1 N2 H1 180.1 180.0
O2 N2 C3 H31 195.6 29.9
O2 N2 C3 H32 86.1 149.9
C3 N2 O2 C1 162.4 180.1
O2 N2 C1 O1 359.7 0.0
O2 N2 C1 H1 179.6 180.1
O1 C1 N2 O2 359.7 0.0
N2 C1 O1 H1 179.9 180.0
H1 C1 N2 O2 179.6 180.1
N2 C1 H1 O1 180.1 180.0