PDB Chemical Component 11U

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 11U

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C14 1.338 1.348
N1 C5 1.409 1.474
N1 C2 1.424 1.470
C14 O32 1.228 1.213
C14 C15 1.456 1.506
C5 C4 1.538 1.549
C4 C3 1.535 1.551
C3 C2 1.556 1.544
C2 C7 1.477 1.507
C7 N23 1.418 1.348
C7 O22 1.278 1.212
N23 C24 1.396 1.466
C24 C25 1.496 1.507
C25 C30 1.413 1.383
C25 C26 1.413 1.384
C30 C29 1.412 1.381
C29 C28 1.421 1.394
C28 C31 1.411 1.481
C28 C27 1.420 1.395
C31 N49 1.281 1.302
C31 N48 1.288 1.378
C27 C26 1.408 1.380
C15 N5 1.486 1.468
N5 C16 1.495 1.469
C16 C17 1.564 1.530
C16 C21 1.558 1.530
C17 C18 1.548 1.530
C18 C19 1.547 1.530
C19 C20 1.550 1.530
C20 C21 1.554 1.530
C15 H15 1.100 1.090
C15 H15A 1.100 1.090
C5 H5 1.100 1.090
C5 H5A 1.100 1.090
C4 H4 1.100 1.091
C4 H4A 1.100 1.090
C3 H3 1.100 1.090
C3 H3A 1.100 1.090
C2 H2 1.100 1.090
N23 HN23 1.000 0.970
C24 H24 1.100 1.089
C24 H24A 1.100 1.090
C30 H30 1.080 1.080
C29 H29 1.080 1.079
N49 HN49 1.000 0.970
N48 HN48 1.000 0.969
N48 HN4A 1.000 0.970
C27 H27 1.080 1.079
C26 H26 1.080 1.080
N5 H20 1.000 1.009
C16 H21 1.100 1.090
C17 H22 1.100 1.090
C17 H23 1.100 1.089
C18 H241 1.100 1.089
C18 H25 1.100 1.090
C19 H261 1.100 1.090
C19 H271 1.100 1.090
C20 H28 1.100 1.090
C20 H291 1.100 1.090
C21 H301 1.100 1.091
C21 H31 1.100 1.090

Bond Angles for 11U

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C5 111.8 108.7
N1 C5 C4 107.7 104.8
N1 C5 H5 110.1 110.4
N1 C5 H5A 110.1 110.4
N1 C2 C7 118.1 109.9
N1 C2 H2 107.1 109.9
O32 C14 C15 115.2 120.0
C14 C15 N5 115.0 109.5
C14 C15 H15 107.7 109.5
C14 C15 H15A 107.7 109.5
C5 C4 H4 111.0 111.0
C5 C4 H4A 111.0 111.0
C4 C3 H3 110.8 110.7
C4 C3 H3A 110.8 110.7
C3 C2 H2 114.0 109.8
C2 C7 N23 114.6 120.0
C2 C7 O22 111.6 120.0
C7 C2 H2 100.3 110.0
O22 C7 N23 133.7 120.0
C7 N23 C24 123.5 120.0
C7 N23 HN23 118.3 120.0
N23 C24 C25 114.6 109.5
C24 N23 HN23 118.3 120.0
N23 C24 H24 107.8 109.5
N23 C24 H24A 107.8 109.5
C24 C25 C30 121.6 119.8
C24 C25 C26 120.8 119.9
C25 C24 H24 107.8 109.5
C25 C24 H24A 107.8 109.5
C26 C25 C30 117.5 120.3
C25 C30 C29 121.1 120.2
C25 C30 H30 119.4 120.0
C25 C26 H26 119.4 119.9
C30 C29 H29 119.2 120.1
C28 C31 N49 123.4 120.0
C28 C31 N48 123.8 120.0
C28 C27 H27 119.1 120.1
N49 C31 N48 112.9 120.0
C31 N49 HN49 112.0 120.0
C31 N48 HN48 120.0 120.0
C31 N48 HN4A 120.0 120.0
C27 C26 H26 119.4 120.0
C15 N5 C16 115.2 111.0
N5 C15 H15 107.7 109.5
N5 C15 H15A 107.7 109.5
C15 N5 H20 107.6 111.0
N5 C16 C17 112.5 109.5
N5 C16 C21 109.0 109.5
C16 N5 H20 107.6 111.0
N5 C16 H21 108.1 109.4
C21 C16 C17 110.4 109.5
C16 C17 C18 113.4 109.5
C17 C16 H21 106.6 109.5
C16 C17 H22 108.2 109.4
C16 C17 H23 108.2 109.5
C21 C16 H21 110.3 109.4
C16 C21 H301 108.4 109.5
C16 C21 H31 108.4 109.5
C17 C18 H241 108.7 109.5
C17 C18 H25 108.7 109.5
C18 C19 H261 108.9 109.5
C18 C19 H271 108.9 109.4
C19 C20 H28 108.7 109.5
C19 C20 H291 108.7 109.5
C20 C21 H301 108.5 109.4
C20 C21 H31 108.4 109.5
H15 C15 H15A 111.2 109.5
H5 C5 H5A 108.9 110.4
H4 C4 H4A 107.9 110.9
H3 C3 H3A 108.1 110.8
H24 C24 H24A 111.1 109.5
HN48 N48 HN4A 120.0 120.1
H22 C17 H23 110.8 109.5
H241 C18 H25 110.3 109.5
H261 C19 H271 110.1 109.5
H28 C20 H291 110.2 109.5
H301 C21 H31 110.5 109.5

Torsion Angles for 11U

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N1 C14 C15 H15 342.7 300.0
N1 C14 C15 H15A 102.7 60.0
C5 N1 C2 C7 147.9 118.1
C5 N1 C2 H2 260.1 239.3
N1 C5 C4 H4 130.1 81.1
N1 C5 C4 H4A 250.1 204.9
H5 C5 N1 H5A 240.0 237.7
C2 N1 C5 C4 339.3 24.4
C2 N1 C5 H5 99.4 143.2
C2 N1 C5 H5A 219.3 265.5
C3 C2 N1 H2 121.9 119.3
N1 C2 C7 N23 122.1 180.0
N1 C2 C7 O22 302.8 0.0
C7 C2 N1 H2 247.8 238.8
O32 C14 C15 N5 44.6 360.0
O32 C14 C15 H15 164.6 120.0
O32 C14 C15 H15A 284.6 240.0
C14 C15 N5 C16 180.3 180.0
N5 C15 C14 H15 240.0 240.0
N5 C15 C14 H15A 120.0 120.0
C14 C15 N5 H20 300.3 304.0
H15 C15 C14 H15A 240.0 240.0
N1 C5 C4 H5 120.0 118.8
N1 C5 C4 H5A 240.0 241.2
C5 C4 C3 H3 122.6 153.8
C5 C4 C3 H3A 242.6 277.1
H4 C4 C5 H4A 240.0 236.2
N1 C5 C4 C3 10.1 323.0
C4 C3 C2 H2 103.1 97.5
H3 C3 C4 H3A 240.0 236.7
C3 C2 N1 C5 22.0 358.6
N1 C2 C3 H2 242.6 240.6
C3 C2 C7 N23 245.0 297.9
C7 C2 C3 H2 112.9 121.1
C7 C2 N1 C5 147.9 118.1
N1 C2 C7 H2 115.9 121.2
C3 C2 C7 H2 238.8 239.0
O22 C7 C2 N23 180.7 180.0
C2 C7 N23 C24 175.3 180.0
C2 C7 N23 HN23 355.3 360.0
C2 C7 N23 O22 180.9 180.0
N23 C7 C2 H2 6.3 58.9
C7 N23 C24 C25 158.4 180.0
C24 N23 C7 HN23 180.0 180.0
C7 N23 C24 H24 278.4 300.0
C7 N23 C24 H24A 38.4 60.0
C2 C7 O22 N23 179.1 180.0
O22 C7 C2 H2 187.0 238.9
O22 C7 N23 C24 354.4 0.0
O22 C7 N23 HN23 174.4 180.0
C7 N23 C24 HN23 180.0 180.0
N23 C24 C25 C30 72.1 90.0
N23 C24 C25 C26 248.6 269.7
C25 C24 N23 H24 240.0 240.0
C25 C24 N23 H24A 120.0 120.0
H24 C24 N23 H24A 240.0 240.0
C25 C24 N23 HN23 338.4 0.0
N23 C24 C25 H24 120.0 120.0
N23 C24 C25 H24A 240.0 240.0
C26 C25 C24 C30 176.5 179.8
C24 C25 C30 C29 173.1 180.0
C24 C25 C30 H30 353.1 0.0
C24 C25 C26 H26 6.6 360.0
H24 C24 C25 H24A 120.0 120.0
C24 C25 C30 C26 176.6 179.8
C30 C25 C24 H24 312.1 330.0
C30 C25 C24 H24A 192.1 209.9
C30 C25 C26 H26 183.2 179.8
C25 C30 C29 H29 180.3 180.0
C24 C25 C26 C30 183.4 180.2
C26 C25 C24 H24 128.6 149.7
C26 C25 C24 H24A 8.6 29.7
C26 C25 C30 C29 356.5 0.3
C26 C25 C30 H30 176.5 180.3
C27 C26 C25 H26 180.0 179.8
C25 C30 C29 H30 180.0 180.0
C25 C30 C29 C28 0.3 360.0
C29 C28 C27 H27 176.7 179.9
C31 C28 C27 H27 355.6 359.9
N49 C31 C28 N48 178.8 180.0
C28 C31 N49 HN49 181.0 180.0
C28 C31 N48 HN48 178.9 360.0
C28 C31 N48 HN4A 358.9 180.0
C28 C27 C26 H26 180.2 180.2
C28 C31 N49 N48 181.0 180.0
N49 C31 N48 HN48 360.0 180.0
N49 C31 N48 HN4A 180.0 360.0
C28 C31 N48 N49 179.0 180.0
N48 C31 N49 HN49 0.0 360.0
HN48 N48 C31 HN4A 180.0 180.0
C27 C26 C25 C30 3.3 359.5
C25 C26 C27 H26 180.0 180.2
C14 C15 N5 H15 120.0 120.0
C14 C15 N5 H15A 240.0 240.0
C15 N5 C16 C17 296.2 205.0
C15 N5 C16 C21 173.4 85.0
C16 N5 C15 H20 240.0 236.1
C15 N5 C16 H21 53.6 325.1
H15 C15 N5 H15A 120.0 120.0
C16 N5 C15 H15 60.3 60.0
C16 N5 C15 H15A 300.3 300.0
C15 N5 C16 H20 120.0 124.0
C21 C16 N5 C17 237.2 240.0
N5 C16 C17 C18 186.1 180.0
C17 C16 N5 H21 242.6 240.0
N5 C16 C17 H22 306.1 300.0
N5 C16 C17 H23 66.1 60.0
C21 C16 N5 H21 119.9 119.9
N5 C16 C21 H301 296.3 300.0
N5 C16 C21 H31 56.3 60.0
N5 C16 C17 C21 238.0 240.0
C17 C16 N5 H20 176.2 81.1
N5 C16 C17 H21 118.3 120.0
C21 C16 C17 H21 240.2 240.0
C17 C16 C21 H301 172.3 180.0
C17 C16 C21 H31 292.3 300.0
C16 C17 C18 H241 173.3 179.9
C16 C17 C18 H25 293.4 300.0
H22 C17 C16 H23 240.0 240.0
N5 C16 C21 C17 124.0 120.0
C21 C16 N5 H20 53.4 321.0
N5 C16 C21 H21 241.5 240.1
C21 C16 C17 C18 308.0 300.0
C17 C16 C21 H21 117.5 120.0
C21 C16 C17 H22 68.0 60.0
C21 C16 C17 H23 188.1 180.0
C20 C21 C16 H301 240.0 240.0
C20 C21 C16 H31 120.0 120.0
H301 C21 C16 H31 240.0 240.0
C18 C17 C16 H21 67.8 60.0
C16 C17 C18 H22 120.0 120.0
C16 C17 C18 H23 240.0 240.0
C17 C18 C19 H261 66.2 60.0
C17 C18 C19 H271 186.2 180.0
H241 C18 C17 H25 240.0 239.9
C16 C17 C18 C19 53.3 60.0
C18 C19 C20 H28 174.6 180.0
C18 C19 C20 H291 294.5 300.0
H261 C19 C18 H271 240.0 240.0
C19 C20 C21 H301 185.4 180.0
C19 C20 C21 H31 65.4 60.0
H28 C20 C19 H291 240.0 239.9
C20 C21 C16 C17 52.3 60.0
C20 C21 C16 H21 294.8 300.0
C16 C21 C20 H301 120.0 120.0
C16 C21 C20 H31 240.0 240.0
H301 C21 C20 H31 120.0 120.0
C14 C15 H15 N5 235.5 240.0
C14 C15 H15 H15A 117.7 120.0
H15 C15 N5 C16 60.3 60.0
N5 C15 H15 H15A 242.3 240.0
H15 C15 N5 H20 180.3 183.9
C14 C15 H15A N5 124.5 120.0
C14 C15 H15A H15 242.3 240.0
H15A C15 N5 C16 300.3 300.0
N5 C15 H15A H15 117.8 120.0
H15A C15 N5 H20 60.3 64.0
N1 C5 H5 C4 241.4 244.6
N1 C5 H5 H5A 120.7 122.3
H5 C5 C4 H4 10.1 322.2
H5 C5 C4 H4A 130.1 86.1
N1 C5 H5A C4 118.6 115.4
N1 C5 H5A H5 239.3 237.7
H5A C5 C4 H4 250.1 199.9
H5A C5 C4 H4A 10.1 323.7
C5 C4 H4 H4A 121.9 123.9
H4 C4 C3 H3 2.6 35.8
H4 C4 C3 H3A 122.6 159.1
C5 C4 H4A H4 238.1 236.1
H4A C4 C3 H3 242.6 271.9
H4A C4 C3 H3A 2.6 35.2
C4 C3 H3 H3A 121.6 123.2
H3 C3 C2 H2 343.1 339.1
C4 C3 H3A H3 238.4 236.7
H3A C3 C2 H2 223.2 215.8
H2 C2 N1 C5 260.1 239.3
N1 C2 H2 C7 236.2 238.9
H2 C2 C7 N23 6.3 58.9
H2 C2 C7 O22 187.0 238.9
C7 N23 HN23 C24 180.0 180.0
HN23 N23 C24 C25 338.4 0.0
HN23 N23 C24 H24 98.4 120.0
HN23 N23 C24 H24A 218.4 240.0
N23 C24 H24 C25 235.8 240.0
H24 C24 N23 HN23 98.4 120.0
N23 C24 H24 H24A 117.9 120.0
H24 C24 C25 C30 312.1 330.0
H24 C24 C25 C26 128.6 149.7
C25 C24 H24 H24A 242.1 240.0
N23 C24 H24A C25 124.2 120.0
H24A C24 N23 HN23 218.4 240.0
N23 C24 H24A H24 242.1 240.0
H24A C24 C25 C30 192.1 209.9
H24A C24 C25 C26 8.6 29.7
C25 C24 H24A H24 117.9 120.0
C25 C30 H30 C29 180.0 180.0
H30 C30 C29 H29 0.3 360.0
HN49 N49 C31 N48 0.0 360.0
C31 N48 HN48 HN4A 180.0 180.0
C31 N48 HN4A HN48 180.0 180.0
H27 C27 C26 H26 0.2 0.1
H26 C26 C25 C30 183.2 179.8
C15 N5 H20 C16 235.3 236.0
H20 N5 C15 H15 180.3 183.9
H20 N5 C15 H15A 60.3 64.0
H20 N5 C16 C17 176.2 81.1
H20 N5 C16 C21 53.4 321.0
H20 N5 C16 H21 293.6 201.1
N5 C16 H21 C17 238.9 240.0
N5 C16 H21 C21 119.0 119.9
H21 C16 N5 H20 293.6 201.1
C21 C16 H21 C17 119.8 120.0
H21 C16 C17 C18 67.8 60.0
H21 C16 C17 H22 187.8 180.0
H21 C16 C17 H23 307.8 300.0
H21 C16 C21 H301 54.8 60.0
H21 C16 C21 H31 174.8 180.0
C16 C17 H22 C18 236.8 240.0
H22 C17 C16 H21 187.8 180.0
C16 C17 H22 H23 118.4 120.0
H22 C17 C18 H241 53.4 60.0
H22 C17 C18 H25 173.4 180.1
C16 C17 H23 C18 123.2 120.0
H23 C17 C16 H21 307.8 300.0
C16 C17 H23 H22 241.6 240.0
H23 C17 C18 H241 293.3 300.0
H23 C17 C18 H25 53.3 60.0
C17 C18 H241 H25 119.0 120.0
H241 C18 C19 H261 306.2 300.0
H241 C18 C19 H271 66.2 60.0
C17 C18 H25 H241 241.0 239.9
H25 C18 C19 H261 186.2 180.0
H25 C18 C19 H271 306.2 300.0
C18 C19 H261 H271 119.2 120.0
H261 C19 C20 H28 54.6 59.9
H261 C19 C20 H291 174.5 180.0
C18 C19 H271 H261 240.8 240.0
H271 C19 C20 H28 294.6 299.9
H271 C19 C20 H291 54.5 60.0
C19 C20 H28 H291 119.0 120.0
H28 C20 C21 H301 65.4 60.0
H28 C20 C21 H31 305.4 300.0
C19 C20 H291 H28 241.0 240.0
H291 C20 C21 H301 305.4 300.0
H291 C20 C21 H31 185.4 180.0
H301 C21 C16 C17 172.3 180.0
H301 C21 C16 H21 54.8 60.0
C16 C21 H301 H31 118.7 120.0
C20 C21 H301 H31 241.3 240.0
H31 C21 C16 C17 292.3 300.0
H31 C21 C16 H21 174.8 180.0
C16 C21 H31 H301 241.3 240.0
C20 C21 H31 H301 118.7 120.0