PDB Chemical Component 115
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 115
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O5 |
C5 |
1.399 |
1.429 |
C92 |
C91 |
1.540 |
1.530 |
C93 |
C91 |
1.550 |
1.530 |
C91 |
N1 |
1.537 |
1.465 |
C5 |
C4 |
1.534 |
1.529 |
C5 |
C6 |
1.507 |
1.508 |
C4 |
C3 |
1.533 |
1.530 |
C6 |
C7 |
1.332 |
1.331 |
N1 |
C9 |
1.457 |
1.376 |
N1 |
C15 |
1.297 |
1.379 |
C7 |
C9 |
1.369 |
1.469 |
C3 |
C2 |
1.536 |
1.530 |
C3 |
O3 |
1.425 |
1.429 |
C2 |
C1 |
1.520 |
1.507 |
C14 |
C15 |
1.417 |
1.391 |
C14 |
C13 |
1.409 |
1.378 |
C9 |
C8 |
1.350 |
1.382 |
C15 |
C10 |
1.382 |
1.406 |
C13 |
C12 |
1.412 |
1.388 |
C1 |
O1B |
1.224 |
1.208 |
C1 |
O1A |
1.354 |
1.343 |
C8 |
C10 |
1.503 |
1.469 |
C8 |
C81 |
1.520 |
1.480 |
C10 |
C11 |
1.412 |
1.396 |
C12 |
C11 |
1.402 |
1.366 |
C81 |
C86 |
1.409 |
1.395 |
C81 |
C82 |
1.406 |
1.395 |
C86 |
C85 |
1.390 |
1.380 |
C82 |
C83 |
1.402 |
1.379 |
C85 |
C84 |
1.400 |
1.386 |
C83 |
C84 |
1.402 |
1.386 |
C84 |
F1 |
1.362 |
1.351 |
C14 |
H1 |
1.080 |
1.080 |
C13 |
H2 |
1.080 |
1.080 |
C12 |
H3 |
1.080 |
1.080 |
C11 |
H4 |
1.080 |
1.080 |
C83 |
H5 |
1.080 |
1.080 |
C82 |
H6 |
1.080 |
1.081 |
C86 |
H7 |
1.080 |
1.080 |
C85 |
H8 |
1.080 |
1.079 |
O1A |
H9 |
0.950 |
0.968 |
O3 |
H10 |
0.951 |
0.968 |
C2 |
H11 |
1.100 |
1.090 |
C2 |
H12 |
1.100 |
1.090 |
C3 |
H13 |
1.101 |
1.090 |
C4 |
H14 |
1.100 |
1.090 |
C4 |
H15 |
1.100 |
1.091 |
C5 |
H16 |
1.100 |
1.090 |
C6 |
H17 |
1.080 |
1.079 |
C7 |
H18 |
1.080 |
1.080 |
C91 |
H19 |
1.100 |
1.090 |
C92 |
H20 |
1.100 |
1.090 |
C92 |
H21 |
1.101 |
1.090 |
C92 |
H22 |
1.100 |
1.090 |
C93 |
H23 |
1.100 |
1.090 |
C93 |
H24 |
1.100 |
1.090 |
C93 |
H25 |
1.100 |
1.091 |
O5 |
H26 |
0.950 |
0.967 |
Bond Angles for 115
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O5 |
C5 |
H16 |
110.5 |
109.5 |
C92 |
C91 |
H19 |
107.5 |
109.4 |
C93 |
C91 |
H19 |
107.3 |
109.5 |
C5 |
C4 |
H14 |
108.6 |
109.5 |
C5 |
C4 |
H15 |
108.6 |
109.5 |
C5 |
C6 |
C7 |
126.3 |
120.0 |
C6 |
C5 |
H16 |
108.9 |
109.5 |
C5 |
C6 |
H17 |
116.9 |
120.0 |
C4 |
C3 |
H13 |
109.2 |
109.4 |
C7 |
C6 |
H17 |
116.8 |
120.0 |
C6 |
C7 |
H18 |
114.5 |
120.1 |
C3 |
C2 |
H11 |
108.2 |
109.4 |
C3 |
C2 |
H12 |
108.2 |
109.5 |
C3 |
O3 |
H10 |
109.5 |
114.0 |
C14 |
C13 |
C12 |
120.0 |
120.6 |
C13 |
C14 |
H1 |
120.2 |
120.0 |
C14 |
C13 |
H2 |
120.0 |
119.8 |
C9 |
C8 |
C81 |
130.3 |
126.8 |
C15 |
C10 |
C11 |
121.8 |
120.0 |
C13 |
C12 |
C11 |
120.4 |
120.5 |
C12 |
C13 |
H2 |
120.0 |
119.6 |
C13 |
C12 |
H3 |
119.8 |
119.7 |
C1 |
O1A |
H9 |
109.5 |
117.0 |
C8 |
C81 |
C86 |
118.7 |
120.1 |
C8 |
C81 |
C82 |
121.2 |
120.1 |
C10 |
C11 |
C12 |
118.7 |
119.8 |
C10 |
C11 |
H4 |
120.6 |
120.0 |
C11 |
C12 |
H3 |
119.8 |
119.8 |
C12 |
C11 |
H4 |
120.6 |
120.2 |
C81 |
C86 |
C85 |
120.1 |
119.9 |
C81 |
C86 |
H7 |
120.0 |
120.1 |
C81 |
C82 |
H6 |
120.3 |
120.1 |
C86 |
C85 |
C84 |
119.8 |
120.1 |
C85 |
C86 |
H7 |
119.9 |
120.0 |
C86 |
C85 |
H8 |
120.1 |
120.0 |
C82 |
C83 |
C84 |
119.9 |
120.1 |
C82 |
C83 |
H5 |
120.0 |
119.9 |
C83 |
C84 |
C85 |
120.5 |
120.3 |
C85 |
C84 |
F1 |
119.4 |
119.9 |
C84 |
C85 |
H8 |
120.1 |
120.0 |
C83 |
C84 |
F1 |
120.1 |
119.9 |
C84 |
C83 |
H5 |
120.0 |
120.0 |
H11 |
C2 |
H12 |
109.5 |
109.5 |
H14 |
C4 |
H15 |
109.5 |
109.4 |
H20 |
C92 |
H21 |
109.5 |
109.5 |
H20 |
C92 |
H22 |
109.5 |
109.5 |
H21 |
C92 |
H22 |
109.5 |
109.5 |
H23 |
C93 |
H24 |
109.5 |
109.5 |
H23 |
C93 |
H25 |
109.5 |
109.5 |
H24 |
C93 |
H25 |
109.5 |
109.4 |
Torsion Angles for 115
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O5 |
C5 |
C4 |
H14 |
313.3 |
175.0 |
O5 |
C5 |
C4 |
H15 |
72.3 |
55.0 |
C6 |
C5 |
O5 |
H16 |
238.9 |
240.0 |
O5 |
C5 |
C6 |
H17 |
295.1 |
185.0 |
C93 |
C91 |
C92 |
H19 |
116.9 |
120.0 |
C92 |
C91 |
C93 |
H19 |
243.0 |
240.1 |
C5 |
C4 |
C3 |
H13 |
301.5 |
305.0 |
H14 |
C4 |
C5 |
H15 |
241.0 |
120.0 |
O5 |
C5 |
C6 |
H16 |
122.0 |
120.0 |
C6 |
C5 |
C4 |
H14 |
192.1 |
55.0 |
C6 |
C5 |
C4 |
H15 |
311.1 |
295.0 |
C7 |
C6 |
C5 |
H17 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
H18 |
359.7 |
5.2 |
C4 |
C3 |
C2 |
H11 |
300.5 |
55.0 |
C4 |
C3 |
C2 |
H12 |
59.0 |
295.0 |
C4 |
C3 |
O3 |
H10 |
180.0 |
60.0 |
C7 |
C6 |
C5 |
H16 |
353.0 |
245.0 |
C5 |
C6 |
C7 |
H17 |
180.0 |
180.0 |
N1 |
C9 |
C8 |
C81 |
180.2 |
180.2 |
C2 |
C3 |
O3 |
H10 |
59.0 |
300.0 |
H11 |
C2 |
C3 |
H12 |
241.4 |
120.0 |
C2 |
C1 |
O1A |
H9 |
180.4 |
180.0 |
C14 |
C15 |
C10 |
C11 |
359.9 |
360.0 |
C14 |
C13 |
C12 |
C11 |
0.1 |
0.0 |
C12 |
C13 |
C14 |
H2 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H3 |
180.1 |
180.0 |
C9 |
C8 |
C81 |
C86 |
54.7 |
293.7 |
C9 |
C8 |
C81 |
C82 |
235.9 |
113.7 |
C15 |
C10 |
C11 |
C12 |
0.2 |
0.0 |
C15 |
C10 |
C11 |
H4 |
180.1 |
180.0 |
C12 |
C13 |
C14 |
H1 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H2 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
C13 |
359.9 |
360.0 |
C11 |
C12 |
C13 |
H3 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H4 |
179.9 |
180.0 |
C8 |
C10 |
C11 |
H4 |
0.0 |
359.6 |
C8 |
C81 |
C86 |
C85 |
181.2 |
180.0 |
C8 |
C81 |
C86 |
H7 |
1.1 |
360.0 |
C8 |
C81 |
C82 |
H6 |
358.8 |
0.0 |
C13 |
C12 |
C11 |
C10 |
359.9 |
360.0 |
C10 |
C11 |
C12 |
H3 |
179.9 |
180.0 |
C12 |
C11 |
C10 |
H4 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
H2 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H3 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H4 |
180.0 |
180.0 |
C8 |
C81 |
C86 |
C82 |
181.2 |
180.0 |
C86 |
C81 |
C82 |
H6 |
180.0 |
180.0 |
C81 |
C86 |
C85 |
C84 |
0.1 |
360.0 |
C85 |
C86 |
C81 |
H7 |
180.0 |
180.1 |
C81 |
C86 |
C85 |
H8 |
180.1 |
180.0 |
C8 |
C81 |
C82 |
C86 |
178.8 |
180.0 |
C81 |
C82 |
C83 |
C84 |
359.9 |
0.1 |
C81 |
C82 |
C83 |
H5 |
179.9 |
179.7 |
C81 |
C86 |
C85 |
H7 |
180.0 |
179.9 |
C83 |
C84 |
C85 |
C86 |
359.8 |
0.0 |
C86 |
C85 |
C84 |
F1 |
179.9 |
180.3 |
C84 |
C85 |
C86 |
H8 |
180.0 |
180.0 |
C8 |
C81 |
C82 |
C83 |
178.8 |
179.9 |
C82 |
C83 |
C84 |
C85 |
0.1 |
359.9 |
C82 |
C83 |
C84 |
F1 |
180.1 |
179.7 |
C84 |
C83 |
C82 |
H5 |
180.0 |
180.4 |
C84 |
C85 |
C86 |
H7 |
180.1 |
180.0 |
C86 |
C85 |
C84 |
H8 |
180.0 |
180.0 |
C83 |
C84 |
C85 |
F1 |
180.0 |
179.8 |
C85 |
C84 |
C83 |
H5 |
180.1 |
180.3 |
C86 |
C85 |
C84 |
C83 |
359.8 |
0.0 |
C82 |
C83 |
C84 |
H5 |
180.0 |
179.6 |
C85 |
C84 |
C83 |
F1 |
180.0 |
180.2 |
C83 |
C84 |
C85 |
H8 |
179.8 |
180.0 |
C83 |
C84 |
F1 |
C85 |
180.0 |
180.2 |
F1 |
C84 |
C85 |
H8 |
359.9 |
0.3 |
F1 |
C84 |
C83 |
H5 |
0.1 |
0.1 |
H1 |
C14 |
C13 |
C12 |
180.0 |
180.0 |
H1 |
C14 |
C13 |
H2 |
0.0 |
0.1 |
C14 |
C13 |
H2 |
C12 |
180.0 |
180.0 |
H2 |
C13 |
C14 |
H1 |
0.0 |
0.1 |
H2 |
C13 |
C12 |
C11 |
180.0 |
180.0 |
H2 |
C13 |
C12 |
H3 |
0.0 |
0.0 |
C13 |
C12 |
H3 |
C11 |
180.0 |
180.0 |
H3 |
C12 |
C13 |
H2 |
0.0 |
0.0 |
H3 |
C12 |
C11 |
H4 |
359.9 |
0.0 |
C10 |
C11 |
H4 |
C12 |
180.0 |
180.0 |
H4 |
C11 |
C12 |
H3 |
359.9 |
0.0 |
C82 |
C83 |
H5 |
C84 |
180.0 |
180.4 |
H5 |
C83 |
C84 |
C85 |
180.1 |
180.3 |
H5 |
C83 |
C84 |
F1 |
0.1 |
0.1 |
H6 |
C82 |
C83 |
C84 |
179.9 |
180.0 |
H6 |
C82 |
C83 |
H5 |
359.9 |
359.6 |
C81 |
C86 |
H7 |
C85 |
180.0 |
180.1 |
H7 |
C86 |
C85 |
C84 |
180.1 |
180.0 |
H7 |
C86 |
C85 |
H8 |
0.1 |
0.0 |
C86 |
C85 |
H8 |
C84 |
180.0 |
180.0 |
H8 |
C85 |
C86 |
H7 |
0.1 |
0.0 |
H8 |
C85 |
C84 |
F1 |
359.9 |
0.3 |
C3 |
C2 |
H11 |
H12 |
117.8 |
240.0 |
C3 |
C2 |
H12 |
H11 |
242.2 |
120.0 |
H13 |
C3 |
C2 |
H11 |
179.6 |
295.0 |
H13 |
C3 |
C2 |
H12 |
298.2 |
175.0 |
H13 |
C3 |
O3 |
H10 |
299.5 |
180.0 |
C5 |
C4 |
H14 |
H15 |
118.4 |
239.9 |
H14 |
C4 |
C3 |
H13 |
181.0 |
65.1 |
C5 |
C4 |
H15 |
H14 |
241.6 |
120.1 |
H15 |
C4 |
C3 |
H13 |
62.1 |
185.0 |
H16 |
C5 |
C4 |
H14 |
72.5 |
295.0 |
H16 |
C5 |
C4 |
H15 |
191.4 |
175.0 |
H16 |
C5 |
C6 |
C7 |
353.0 |
245.0 |
H16 |
C5 |
C6 |
H17 |
173.0 |
65.0 |
C5 |
C6 |
H17 |
C7 |
180.0 |
180.0 |
H17 |
C6 |
C5 |
H16 |
173.0 |
65.0 |
H17 |
C6 |
C7 |
H18 |
179.7 |
185.2 |
H18 |
C7 |
C6 |
H17 |
179.7 |
185.2 |
H20 |
C92 |
C91 |
H19 |
63.1 |
180.0 |
H21 |
C92 |
H20 |
H22 |
120.0 |
120.0 |
H21 |
C92 |
C91 |
H19 |
183.1 |
300.0 |
H20 |
C92 |
H21 |
H22 |
240.0 |
240.0 |
H22 |
C92 |
C91 |
H19 |
303.1 |
60.0 |
H20 |
C92 |
H22 |
H21 |
120.0 |
120.0 |
H23 |
C93 |
C91 |
H19 |
297.0 |
59.9 |
H24 |
C93 |
H23 |
H25 |
120.0 |
120.0 |
H24 |
C93 |
C91 |
H19 |
57.0 |
180.0 |
H23 |
C93 |
H24 |
H25 |
240.0 |
240.0 |
H25 |
C93 |
C91 |
H19 |
177.0 |
299.9 |
H23 |
C93 |
H25 |
H24 |
120.0 |
120.1 |
H26 |
O5 |
C5 |
H16 |
62.1 |
179.9 |