PDB Chemical Component 10L
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 10L
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N3 |
C3 |
1.374 |
1.397 |
C3 |
C2 |
1.416 |
1.399 |
C3 |
C4 |
1.396 |
1.382 |
C2 |
C1 |
1.387 |
1.406 |
C2 |
N9 |
1.373 |
1.373 |
C4 |
C5 |
1.384 |
1.389 |
C5 |
C6 |
1.385 |
1.364 |
C6 |
C1 |
1.391 |
1.403 |
C1 |
C1' |
1.403 |
1.417 |
C1' |
N1' |
1.344 |
1.302 |
N1' |
N9 |
1.361 |
1.400 |
N3 |
H31N |
1.000 |
0.970 |
N3 |
H32N |
1.000 |
0.970 |
C4 |
H4 |
1.080 |
1.080 |
N9 |
H9 |
1.000 |
0.970 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.079 |
C1' |
H1' |
1.080 |
1.080 |
Bond Angles for 10L
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N3 |
C3 |
C2 |
123.0 |
120.2 |
N3 |
C3 |
C4 |
119.9 |
120.2 |
C3 |
N3 |
H31N |
109.5 |
120.1 |
C3 |
N3 |
H32N |
109.4 |
120.0 |
C2 |
C3 |
C4 |
117.1 |
119.6 |
C3 |
C2 |
C1 |
121.2 |
119.6 |
C3 |
C2 |
N9 |
132.3 |
133.8 |
C3 |
C4 |
C5 |
121.4 |
120.5 |
C3 |
C4 |
H4 |
119.3 |
119.8 |
C1 |
C2 |
N9 |
106.5 |
106.6 |
C2 |
C1 |
C6 |
120.3 |
119.6 |
C2 |
C1 |
C1' |
105.4 |
106.9 |
C2 |
N9 |
N1' |
111.6 |
108.1 |
C2 |
N9 |
H9 |
124.2 |
126.0 |
C4 |
C5 |
C6 |
120.9 |
120.8 |
C5 |
C4 |
H4 |
119.3 |
119.7 |
C4 |
C5 |
H5 |
119.6 |
119.7 |
C5 |
C6 |
C1 |
119.0 |
120.0 |
C6 |
C5 |
H5 |
119.5 |
119.6 |
C5 |
C6 |
H6 |
120.5 |
120.1 |
C6 |
C1 |
C1' |
134.3 |
133.5 |
C1 |
C6 |
H6 |
120.5 |
120.0 |
C1 |
C1' |
N1' |
111.4 |
108.7 |
C1 |
C1' |
H1' |
124.3 |
125.6 |
C1' |
N1' |
N9 |
105.2 |
109.8 |
N1' |
C1' |
H1' |
124.3 |
125.7 |
N1' |
N9 |
H9 |
124.2 |
126.0 |
H31N |
N3 |
H32N |
109.5 |
119.9 |
Torsion Angles for 10L
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C3 |
N3 |
C4 |
179.5 |
180.3 |
N3 |
C3 |
C2 |
C1 |
180.7 |
180.0 |
N3 |
C3 |
C2 |
N9 |
0.1 |
0.0 |
N3 |
C3 |
C4 |
C5 |
179.6 |
180.0 |
N3 |
C3 |
C4 |
H4 |
359.6 |
359.9 |
H31N |
N3 |
C3 |
H32N |
240.0 |
180.3 |
N3 |
C3 |
C2 |
C4 |
180.5 |
179.7 |
C2 |
C3 |
N3 |
H31N |
180.0 |
0.0 |
C2 |
C3 |
N3 |
H32N |
300.0 |
179.7 |
C2 |
C3 |
C4 |
C5 |
0.1 |
359.8 |
C2 |
C3 |
C4 |
H4 |
180.1 |
179.6 |
C1 |
C2 |
C3 |
N9 |
180.6 |
179.9 |
C3 |
C2 |
C1 |
C6 |
359.8 |
0.0 |
C3 |
C2 |
C1 |
C1' |
179.7 |
180.0 |
C3 |
C2 |
N9 |
N1' |
180.4 |
180.0 |
C3 |
C2 |
N9 |
H9 |
0.4 |
359.9 |
N3 |
C3 |
C4 |
C2 |
179.5 |
180.3 |
C4 |
C3 |
N3 |
H31N |
0.5 |
179.7 |
C4 |
C3 |
N3 |
H32N |
120.6 |
359.4 |
C4 |
C3 |
C2 |
C1 |
0.2 |
0.2 |
C4 |
C3 |
C2 |
N9 |
179.6 |
180.3 |
C3 |
C4 |
C5 |
C6 |
359.6 |
359.9 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H5 |
179.6 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.2 |
0.2 |
C3 |
C2 |
C1 |
N9 |
179.5 |
180.0 |
C1 |
C2 |
N9 |
N1' |
359.9 |
0.1 |
C1 |
C2 |
N9 |
H9 |
179.8 |
180.0 |
C5 |
C6 |
C1 |
C2 |
359.9 |
359.7 |
C6 |
C1 |
C2 |
C1' |
180.2 |
180.1 |
C2 |
C1 |
C6 |
H6 |
179.9 |
180.0 |
C2 |
C1 |
C1' |
N1' |
360.0 |
0.0 |
C2 |
C1 |
C1' |
H1' |
180.0 |
180.0 |
N9 |
C2 |
C3 |
C4 |
179.6 |
180.3 |
C3 |
C2 |
N9 |
C1 |
180.5 |
180.0 |
N9 |
C2 |
C1 |
C6 |
180.3 |
180.0 |
N9 |
C2 |
C1 |
C1' |
0.1 |
360.0 |
C1' |
N1' |
N9 |
C2 |
0.1 |
360.0 |
N1' |
N9 |
C2 |
H9 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
C1 |
0.4 |
0.3 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
H6 |
180.4 |
180.0 |
C2 |
C1 |
C6 |
C5 |
359.9 |
359.7 |
C6 |
C5 |
C4 |
H4 |
179.6 |
180.1 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
C5 |
C6 |
C1 |
C1' |
180.1 |
179.7 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.3 |
C6 |
C1 |
C2 |
N9 |
180.3 |
180.0 |
C2 |
C1 |
C6 |
C1' |
179.7 |
179.9 |
C1 |
C6 |
C5 |
H5 |
180.4 |
180.3 |
C5 |
C6 |
C1 |
H6 |
180.0 |
179.7 |
C6 |
C1 |
C1' |
N1' |
179.7 |
180.0 |
C6 |
C1 |
C1' |
H1' |
359.7 |
360.0 |
C1' |
C1 |
C2 |
N9 |
0.1 |
360.0 |
C2 |
C1 |
C1' |
C6 |
180.2 |
180.1 |
C1' |
C1 |
C6 |
H6 |
0.1 |
0.1 |
C1 |
C1' |
N1' |
N9 |
360.0 |
0.0 |
N1' |
C1' |
C1 |
H1' |
180.0 |
180.0 |
C2 |
N9 |
N1' |
C1' |
0.1 |
360.0 |
C1 |
C1' |
N1' |
H1' |
180.0 |
180.0 |
C1' |
N1' |
N9 |
H9 |
180.1 |
180.0 |
C2 |
N9 |
N1' |
H9 |
180.0 |
179.9 |
N9 |
N1' |
C1' |
H1' |
180.0 |
180.0 |
H31N |
N3 |
C3 |
C2 |
180.0 |
0.0 |
H31N |
N3 |
C3 |
C4 |
0.5 |
179.7 |
C3 |
N3 |
H31N |
H32N |
120.0 |
179.7 |
H32N |
N3 |
C3 |
C2 |
300.0 |
179.7 |
H32N |
N3 |
C3 |
C4 |
120.6 |
359.4 |
C3 |
N3 |
H32N |
H31N |
240.0 |
180.3 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.1 |
H4 |
C4 |
C5 |
C6 |
179.6 |
180.1 |
H4 |
C4 |
C5 |
H5 |
359.6 |
0.1 |
C2 |
N9 |
H9 |
N1' |
180.0 |
180.1 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C4 |
H4 |
359.6 |
0.1 |
H5 |
C5 |
C6 |
C1 |
180.4 |
180.3 |
H5 |
C5 |
C6 |
H6 |
0.4 |
359.9 |
C5 |
C6 |
H6 |
C1 |
180.0 |
180.3 |
H6 |
C6 |
C5 |
H5 |
0.4 |
359.9 |
H6 |
C6 |
C1 |
C1' |
0.1 |
0.1 |
C1 |
C1' |
H1' |
N1' |
180.0 |
180.0 |
H1' |
C1' |
N1' |
N9 |
180.0 |
180.0 |