PDB Chemical Component 10L

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 10L

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N3 C3 1.374 1.397
C3 C2 1.416 1.399
C3 C4 1.396 1.382
C2 C1 1.387 1.406
C2 N9 1.373 1.373
C4 C5 1.384 1.389
C5 C6 1.385 1.364
C6 C1 1.391 1.403
C1 C1' 1.403 1.417
C1' N1' 1.344 1.302
N1' N9 1.361 1.400
N3 H31N 1.000 0.970
N3 H32N 1.000 0.970
C4 H4 1.080 1.080
N9 H9 1.000 0.970
C5 H5 1.080 1.080
C6 H6 1.080 1.079
C1' H1' 1.080 1.080

Bond Angles for 10L

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N3 C3 C2 123.0 120.2
N3 C3 C4 119.9 120.2
C3 N3 H31N 109.5 120.1
C3 N3 H32N 109.4 120.0
C2 C3 C4 117.1 119.6
C3 C2 C1 121.2 119.6
C3 C2 N9 132.3 133.8
C3 C4 C5 121.4 120.5
C3 C4 H4 119.3 119.8
C1 C2 N9 106.5 106.6
C2 C1 C6 120.3 119.6
C2 C1 C1' 105.4 106.9
C2 N9 N1' 111.6 108.1
C2 N9 H9 124.2 126.0
C4 C5 C6 120.9 120.8
C5 C4 H4 119.3 119.7
C4 C5 H5 119.6 119.7
C5 C6 C1 119.0 120.0
C6 C5 H5 119.5 119.6
C5 C6 H6 120.5 120.1
C6 C1 C1' 134.3 133.5
C1 C6 H6 120.5 120.0
C1 C1' N1' 111.4 108.7
C1 C1' H1' 124.3 125.6
C1' N1' N9 105.2 109.8
N1' C1' H1' 124.3 125.7
N1' N9 H9 124.2 126.0
H31N N3 H32N 109.5 119.9

Torsion Angles for 10L

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C3 N3 C4 179.5 180.3
N3 C3 C2 C1 180.7 180.0
N3 C3 C2 N9 0.1 0.0
N3 C3 C4 C5 179.6 180.0
N3 C3 C4 H4 359.6 359.9
H31N N3 C3 H32N 240.0 180.3
N3 C3 C2 C4 180.5 179.7
C2 C3 N3 H31N 180.0 0.0
C2 C3 N3 H32N 300.0 179.7
C2 C3 C4 C5 0.1 359.8
C2 C3 C4 H4 180.1 179.6
C1 C2 C3 N9 180.6 179.9
C3 C2 C1 C6 359.8 0.0
C3 C2 C1 C1' 179.7 180.0
C3 C2 N9 N1' 180.4 180.0
C3 C2 N9 H9 0.4 359.9
N3 C3 C4 C2 179.5 180.3
C4 C3 N3 H31N 0.5 179.7
C4 C3 N3 H32N 120.6 359.4
C4 C3 C2 C1 0.2 0.2
C4 C3 C2 N9 179.6 180.3
C3 C4 C5 C6 359.6 359.9
C5 C4 C3 H4 180.0 180.1
C3 C4 C5 H5 179.6 180.0
C1 C2 C3 C4 0.2 0.2
C3 C2 C1 N9 179.5 180.0
C1 C2 N9 N1' 359.9 0.1
C1 C2 N9 H9 179.8 180.0
C5 C6 C1 C2 359.9 359.7
C6 C1 C2 C1' 180.2 180.1
C2 C1 C6 H6 179.9 180.0
C2 C1 C1' N1' 360.0 0.0
C2 C1 C1' H1' 180.0 180.0
N9 C2 C3 C4 179.6 180.3
C3 C2 N9 C1 180.5 180.0
N9 C2 C1 C6 180.3 180.0
N9 C2 C1 C1' 0.1 360.0
C1' N1' N9 C2 0.1 360.0
N1' N9 C2 H9 180.0 180.1
C3 C4 C5 H4 180.0 179.9
C4 C5 C6 C1 0.4 0.3
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 H6 180.4 180.0
C2 C1 C6 C5 359.9 359.7
C6 C5 C4 H4 179.6 180.1
C4 C5 C6 H5 180.0 180.1
C5 C6 C1 C1' 180.1 179.7
C1 C6 C5 H6 180.0 180.3
C6 C1 C2 N9 180.3 180.0
C2 C1 C6 C1' 179.7 179.9
C1 C6 C5 H5 180.4 180.3
C5 C6 C1 H6 180.0 179.7
C6 C1 C1' N1' 179.7 180.0
C6 C1 C1' H1' 359.7 360.0
C1' C1 C2 N9 0.1 360.0
C2 C1 C1' C6 180.2 180.1
C1' C1 C6 H6 0.1 0.1
C1 C1' N1' N9 360.0 0.0
N1' C1' C1 H1' 180.0 180.0
C2 N9 N1' C1' 0.1 360.0
C1 C1' N1' H1' 180.0 180.0
C1' N1' N9 H9 180.1 180.0
C2 N9 N1' H9 180.0 179.9
N9 N1' C1' H1' 180.0 180.0
H31N N3 C3 C2 180.0 0.0
H31N N3 C3 C4 0.5 179.7
C3 N3 H31N H32N 120.0 179.7
H32N N3 C3 C2 300.0 179.7
H32N N3 C3 C4 120.6 359.4
C3 N3 H32N H31N 240.0 180.3
C3 C4 H4 C5 180.0 180.1
H4 C4 C5 C6 179.6 180.1
H4 C4 C5 H5 359.6 0.1
C2 N9 H9 N1' 180.0 180.1
C4 C5 H5 C6 180.0 179.9
H5 C5 C4 H4 359.6 0.1
H5 C5 C6 C1 180.4 180.3
H5 C5 C6 H6 0.4 359.9
C5 C6 H6 C1 180.0 180.3
H6 C6 C5 H5 0.4 359.9
H6 C6 C1 C1' 0.1 0.1
C1 C1' H1' N1' 180.0 180.0
H1' C1' N1' N9 180.0 180.0