PDB Chemical Component 108

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 108

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.392	1.395
C1	C6	1.385	1.395
C1	C8	1.452	1.479
C2	C3	1.400	1.377
C2	H2	1.103	1.081
C3	C4	1.394	1.390
C3	C7	1.452	1.506
C4	C5	1.390	1.389
C4	O1	1.349	1.357
C5	C6	1.378	1.378
C5	H5	1.102	1.080
C6	H6	1.103	1.080
C7	N	1.304	1.468
C7	H71	1.116	1.090
C7	H72	1.114	1.089
C8	N1	1.326	1.378
C8	N2	1.325	1.303
O1	HO1	0.949	0.967
N1	HN11	1.020	0.970
N1	HN12	1.020	0.969
N2	HN2	1.020	0.970
N	CA	1.461	1.469
N	H	1.021	1.008
CA	CB	1.521	1.530
CA	C	1.524	1.507
CA	HA	1.115	1.090
CB	HB1	1.115	1.090
CB	HB2	1.115	1.090
CB	HB3	1.115	1.090
C	O	1.237	1.208
C	OXT	1.287	1.342
OXT	HXT	0.950	0.965

Bond Angles for 108

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	118.9	119.9
C2	C1	C8	120.9	120.1
C1	C2	C3	121.2	120.0
C1	C2	H2	119.1	120.1
C6	C1	C8	120.1	120.1
C1	C6	C5	120.4	119.9
C1	C6	H6	120.1	120.1
C1	C8	N1	120.0	120.0
C1	C8	N2	120.3	120.0
C3	C2	H2	119.7	120.0
C2	C3	C4	118.9	120.0
C2	C3	C7	119.1	120.0
C4	C3	C7	121.9	119.9
C3	C4	C5	119.4	120.1
C3	C4	O1	124.7	119.9
C3	C7	N	125.0	109.5
C3	C7	H71	106.7	109.4
C3	C7	H72	106.7	109.5
C5	C4	O1	115.8	119.9
C4	C5	C6	121.1	120.1
C4	C5	H5	119.9	119.9
C4	O1	HO1	124.7	106.8
C6	C5	H5	119.0	120.0
C5	C6	H6	119.6	120.1
N	C7	H71	106.7	109.5
N	C7	H72	106.7	109.5
C7	N	CA	117.3	106.7
C7	N	H	109.4	106.7
H71	C7	H72	102.9	109.4
N1	C8	N2	119.7	120.0
C8	N1	HN11	120.0	120.0
C8	N1	HN12	108.5	120.1
C8	N2	HN2	119.9	120.0
HN11	N1	HN12	108.5	120.0
CA	N	H	109.4	106.8
N	CA	CB	110.1	109.5
N	CA	C	111.1	109.5
N	CA	HA	108.1	109.5
CB	CA	C	110.0	109.5
CB	CA	HA	109.3	109.5
CA	CB	HB1	110.0	109.5
CA	CB	HB2	112.0	109.5
CA	CB	HB3	111.9	109.5
C	CA	HA	108.1	109.4
CA	C	O	118.5	120.0
CA	C	OXT	116.7	120.1
HB1	CB	HB2	112.0	109.4
HB1	CB	HB3	112.0	109.4
HB2	CB	HB3	98.5	109.5
O	C	OXT	124.9	120.0
C	OXT	HXT	116.7	120.1

Torsion Angles for 108

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	C8	183.9	180.1
C2	C1	C6	C5	0.1	360.0
C2	C1	C6	H6	180.1	179.9
C2	C1	C8	N1	168.5	180.0
C2	C1	C8	N2	348.3	360.0
C3	C2	C1	H2	180.0	179.9
C1	C2	C3	C4	0.0	0.3
C1	C2	C3	C7	180.0	179.9
C2	C1	C6	C8	176.2	179.9
C6	C1	C2	C3	359.9	360.0
C6	C1	C2	H2	179.8	180.1
C6	C1	C8	N1	344.6	360.0
C6	C1	C8	N2	164.4	179.9
C4	C5	C6	C1	360.0	359.8
C1	C6	C5	H5	180.0	180.0
C5	C6	C1	H6	180.0	180.0
C2	C1	C8	C6	183.9	180.1
C8	C1	C2	C3	176.0	179.9
C8	C1	C2	H2	356.0	360.0
C8	C1	C6	C5	183.9	180.0
C8	C1	C6	H6	3.9	0.0
N1	C8	C1	N2	180.3	180.0
C1	C8	N1	HN11	180.1	180.0
C1	C8	N1	HN12	54.7	0.0
C1	C8	N2	HN2	76.3	180.0
C3	C2	C1	C6	359.9	360.0
C3	C2	C1	C8	176.0	179.9
C1	C2	C3	H2	180.0	180.1
C4	C3	C2	C7	180.1	180.4
C2	C3	C4	C5	0.1	359.5
C2	C3	C4	O1	179.8	179.9
C2	C3	C7	N	180.2	120.0
C2	C3	C7	H71	305.4	0.0
C2	C3	C7	H72	54.9	240.1
H2	C2	C1	C6	179.8	180.1
H2	C2	C1	C8	356.0	360.0
C1	C2	H2	C3	180.0	179.9
H2	C2	C3	C4	180.1	180.2
H2	C2	C3	C7	0.0	359.9
C4	C3	C2	H2	180.1	180.2
C2	C3	C4	C7	179.9	179.6
C4	C3	C7	N	0.1	299.7
C4	C3	C7	H71	125.4	179.7
C4	C3	C7	H72	234.8	59.8
C5	C4	C3	O1	180.3	179.5
C3	C4	C5	C6	359.9	0.5
C3	C4	C5	H5	179.9	180.3
C3	C4	O1	HO1	180.0	269.4
C7	C3	C2	H2	0.0	359.9
C2	C3	C7	C4	180.1	180.4
C7	C3	C4	C5	180.1	179.8
C7	C3	C4	O1	359.9	0.3
N	C7	C3	H71	234.7	120.0
N	C7	C3	H72	125.3	239.9
C3	C7	N	CA	180.1	180.1
C3	C7	N	H	54.8	66.2
H71	C7	C3	H72	250.6	119.9
C1	C6	C5	C4	360.0	359.8
C5	C4	C3	C7	180.1	179.8
C3	C4	C5	O1	179.7	180.5
C5	C4	O1	HO1	359.7	89.9
C6	C5	C4	H5	180.0	180.2
C4	C5	C6	H6	180.0	179.8
O1	C4	C3	C7	359.9	0.3
C3	C4	O1	C5	180.3	179.5
O1	C4	C5	C6	180.2	180.0
O1	C4	C5	H5	0.2	359.9
C5	C6	C1	C8	183.9	180.0
C1	C6	C5	H6	180.0	180.0
C6	C5	C4	O1	180.2	180.0
C4	C5	C6	H5	180.0	179.8
H5	C5	C4	O1	0.2	359.9
C4	C5	H5	C6	180.0	180.2
H5	C5	C6	H6	360.0	360.0
H6	C6	C1	C8	3.9	0.0
C1	C6	H6	C5	180.0	180.0
H6	C6	C5	H5	360.0	360.0
C3	C7	N	H71	125.2	240.0
C3	C7	N	H72	234.7	120.1
H71	C7	N	H72	109.5	240.1
CA	N	C7	H	125.2	113.9
C7	N	CA	CB	79.4	90.0
C7	N	CA	C	201.5	210.0
C7	N	CA	HA	320.1	330.0
C3	C7	H71	N	224.3	120.0
C3	C7	H71	H72	112.1	240.0
N	C7	H71	H72	247.8	120.0
H71	C7	N	CA	54.8	300.0
H71	C7	N	H	289.6	186.2
C3	C7	H72	N	135.7	239.9
C3	C7	H72	H71	247.9	119.9
N	C7	H72	H71	112.2	240.0
H72	C7	N	CA	305.4	60.0
H72	C7	N	H	180.1	306.1
C1	C8	N1	N2	179.7	180.0
N1	C8	N2	HN2	256.0	359.9
HN11	N1	C8	HN12	125.3	180.0
C1	C8	N2	N1	180.3	180.0
N2	C8	N1	HN11	0.3	0.1
N2	C8	N1	HN12	235.0	180.1
HN11	N1	C8	N2	0.3	0.1
C8	N1	HN11	HN12	234.6	180.0
HN12	N1	C8	N2	235.0	180.1
C8	N1	HN12	HN11	131.9	180.0
CA	N	C7	H71	54.8	300.0
CA	N	C7	H72	305.4	60.0
C7	N	CA	H	234.7	246.2
CB	CA	N	C	237.8	240.0
CB	CA	N	HA	119.3	120.0
N	CA	CB	HB1	180.0	60.0
N	CA	CB	HB2	305.2	180.0
N	CA	CB	HB3	54.7	300.0
C	CA	N	HA	241.5	240.0
N	CA	C	O	173.3	359.9
N	CA	C	OXT	353.2	180.0
H	N	C7	H71	289.6	186.2
H	N	C7	H72	180.1	306.1
C7	N	H	CA	129.7	113.9
H	N	CA	CB	204.6	203.8
H	N	CA	C	326.8	323.8
H	N	CA	HA	85.3	83.8
CB	CA	N	H	204.6	203.8
N	CA	CB	C	122.8	120.0
N	CA	CB	HA	241.4	240.0
C	CA	CB	HA	118.6	120.0
CB	CA	C	O	295.4	120.0
CB	CA	C	OXT	115.4	300.1
HB1	CB	CA	HB2	234.8	240.0
HB1	CB	CA	HB3	125.3	120.0
HB2	CB	CA	HB3	250.5	239.9
C	CA	N	H	326.8	323.8
N	CA	C	CB	237.8	239.9
N	CA	C	HA	118.5	120.0
CB	CA	C	HA	240.7	240.0
C	CA	CB	HB1	57.2	300.0
C	CA	CB	HB2	182.4	59.9
C	CA	CB	HB3	291.9	180.0
O	C	CA	OXT	180.0	179.9
CA	C	OXT	HXT	179.9	180.0
HA	CA	N	H	85.3	83.8
N	CA	HA	CB	119.8	120.0
N	CA	HA	C	239.6	240.0
CB	CA	HA	C	119.8	120.0
HA	CA	CB	HB1	298.6	180.0
HA	CA	CB	HB2	63.8	300.0
HA	CA	CB	HB3	173.3	60.0
HA	CA	C	O	54.7	240.0
HA	CA	C	OXT	234.7	60.0
HB1	CB	CA	C	57.2	300.0
HB1	CB	CA	HA	298.6	180.0
CA	CB	HB1	HB2	125.2	120.0
CA	CB	HB1	HB3	234.8	240.0
HB2	CB	HB1	HB3	109.6	120.0
HB2	CB	CA	C	182.4	59.9
HB2	CB	CA	HA	63.8	300.0
CA	CB	HB2	HB1	235.9	240.0
CA	CB	HB2	HB3	117.9	120.0
HB1	CB	HB2	HB3	242.0	240.0
HB3	CB	CA	C	291.9	180.0
HB3	CB	CA	HA	173.3	60.0
CA	CB	HB3	HB1	124.1	120.0
CA	CB	HB3	HB2	242.1	239.9
HB1	CB	HB3	HB2	118.0	120.0
O	C	CA	HA	54.7	240.0
CA	C	O	OXT	180.0	180.1
O	C	OXT	HXT	359.9	0.1
OXT	C	CA	HA	234.7	60.0
CA	C	OXT	O	180.0	179.9