PDB Chemical Component 0ZB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0ZB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N OH 1.397 1.416
N C1 1.318 1.347
N HN 1.000 0.970
OH HOH 0.950 0.967
C1 O1 1.246 1.213
C1 CA 1.546 1.507
CA CB 1.542 1.530
CA C 1.532 1.507
CA HA 1.100 1.090
CB CG 1.542 1.530
CB HB1 1.100 1.090
CB HB2 1.099 1.091
CG CD1 1.517 1.530
CG CD2 1.515 1.531
CG HG 1.099 1.089
CD1 HD11 1.100 1.090
CD1 HD12 1.100 1.090
CD1 HD13 1.100 1.090
CD2 HD21 1.100 1.089
CD2 HD22 1.100 1.089
CD2 HD23 1.100 1.090
C O 1.235 1.214
N1 CA1 1.453 1.464
N1 H 1.000 0.970
CA1 C2 1.534 1.507
CA1 CB1 1.531 1.531
CA1 HA1 1.100 1.090
C2 O2 1.236 1.213
CB1 CG1 1.516 1.507
CB1 HB21 1.100 1.089
CB1 HB3 1.100 1.090
CG1 OD1 1.250 1.209
CG1 OD2 1.247 1.342
OD2 HD2 0.950 0.967
N2 C3 1.460 1.465
N2 HN2 1.000 0.970
C3 C11 1.507 1.507
C3 H1 1.100 1.090
C3 H2A 1.101 1.090
C11 C21 1.403 1.383
C11 C6 1.398 1.382
C21 C31 1.394 1.383
C21 H2 1.080 1.079
C31 C4 1.404 1.383
C31 H3 1.080 1.080
C4 C5 1.400 1.383
C4 H4 1.080 1.080
C5 C6 1.404 1.383
C5 H5 1.080 1.079
C6 H6 1.080 1.081
C N1 1.327 1.347
C2 N2 1.333 1.347

Bond Angles for 0ZB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OH N C1 103.0 120.0
OH N HN 128.5 120.0
N OH HOH 109.5 114.0
C1 N HN 128.5 120.0
N C1 O1 121.2 120.0
N C1 CA 114.3 120.0
O1 C1 CA 123.2 120.0
C1 CA CB 111.8 109.5
C1 CA C 117.2 109.5
C1 CA HA 102.4 109.4
CB CA C 110.5 109.5
CB CA HA 110.3 109.5
CA CB CG 119.5 109.5
CA CB HB1 106.2 109.5
CA CB HB2 103.9 109.5
C CA HA 103.9 109.5
CA C O 120.7 120.0
CA C N1 116.7 120.0
CG CB HB1 106.3 109.5
CG CB HB2 103.9 109.5
CB CG CD1 110.7 109.5
CB CG CD2 111.9 109.4
CB CG HG 107.0 109.5
HB1 CB HB2 117.8 109.5
CD1 CG CD2 109.5 109.5
CD1 CG HG 109.5 109.5
CG CD1 HD11 109.5 109.5
CG CD1 HD12 109.4 109.5
CG CD1 HD13 109.4 109.5
CD2 CG HG 108.2 109.5
CG CD2 HD21 109.5 109.5
CG CD2 HD22 109.5 109.5
CG CD2 HD23 109.5 109.4
HD11 CD1 HD12 109.4 109.5
HD11 CD1 HD13 109.5 109.4
HD12 CD1 HD13 109.5 109.5
HD21 CD2 HD22 109.5 109.5
HD21 CD2 HD23 109.4 109.5
HD22 CD2 HD23 109.5 109.4
O C N1 122.5 120.0
CA1 N1 H 119.8 120.0
N1 CA1 C2 109.6 109.5
N1 CA1 CB1 110.6 109.5
N1 CA1 HA1 109.1 109.5
C N1 CA1 120.4 120.0
C N1 H 119.8 120.0
C2 CA1 CB1 110.8 109.4
C2 CA1 HA1 108.8 109.4
CA1 C2 O2 121.0 120.0
CA1 C2 N2 116.3 120.0
CB1 CA1 HA1 107.8 109.5
CA1 CB1 CG1 112.7 109.4
CA1 CB1 HB21 108.4 109.4
CA1 CB1 HB3 107.7 109.5
O2 C2 N2 122.8 120.0
CG1 CB1 HB21 108.4 109.5
CG1 CB1 HB3 107.7 109.5
CB1 CG1 OD1 118.7 120.0
CB1 CG1 OD2 118.1 120.0
HB21 CB1 HB3 112.0 109.5
OD1 CG1 OD2 123.1 120.0
CG1 OD2 HD2 109.5 117.0
C3 N2 HN2 117.8 119.9
N2 C3 C11 125.4 109.5
N2 C3 H1 104.5 109.4
N2 C3 H2A 100.7 109.4
C2 N2 C3 124.3 120.0
C2 N2 HN2 117.9 120.0
C11 C3 H1 104.5 109.5
C11 C3 H2A 100.7 109.5
C3 C11 C21 120.4 120.0
C3 C11 C6 120.9 120.0
H1 C3 H2A 123.0 109.5
C21 C11 C6 118.7 120.0
C11 C21 C31 120.6 120.0
C11 C21 H2 119.7 120.0
C11 C6 C5 121.2 120.0
C11 C6 H6 119.4 120.0
C31 C21 H2 119.7 120.0
C21 C31 C4 120.5 120.0
C21 C31 H3 119.8 120.0
C4 C31 H3 119.8 120.0
C31 C4 C5 119.4 120.0
C31 C4 H4 120.3 120.0
C5 C4 H4 120.3 120.0
C4 C5 C6 119.6 119.9
C4 C5 H5 120.2 120.0
C6 C5 H5 120.2 120.0
C5 C6 H6 119.4 119.9

Torsion Angles for 0ZB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 N OH HN 180.0 180.2
OH N C1 O1 34.9 355.1
OH N C1 CA 202.0 175.1
OH N C1 HN 180.0 179.8
C1 N OH HOH 23.4 179.9
O1 C1 N CA 192.9 180.1
N C1 CA CB 150.1 143.7
N C1 CA C 279.2 263.7
N C1 CA HA 32.1 23.7
OH N HN C1 180.0 180.2
HN N OH HOH 203.4 359.7
HN N C1 O1 214.9 175.4
HN N C1 CA 22.0 355.3
HOH OH N C1 23.4 179.9
HOH OH N HN 203.4 359.7
O1 C1 N HN 214.9 175.4
N C1 O1 CA 166.0 179.9
O1 C1 CA CB 316.9 323.6
O1 C1 CA C 86.0 83.6
O1 C1 CA HA 198.9 203.6
CA C1 N HN 22.0 355.3
N C1 CA O1 193.2 180.1
CB CA C1 C 230.9 240.0
CB CA C1 HA 118.0 120.0
C1 CA CB CG 272.6 295.0
C1 CA CB HB1 32.6 55.0
C1 CA CB HB2 157.5 175.0
C CA C1 HA 247.1 240.0
C1 CA C O 120.6 259.5
C1 CA C N1 301.9 79.4
C1 CA CB C 132.5 120.0
C1 CA CB HA 246.8 240.0
C CA CB HA 114.3 120.0
CB CA C O 250.3 19.5
CB CA C N1 71.6 199.4
CG CB CA HB1 240.0 240.0
CG CB CA HB2 115.1 120.0
CA CB CG CD1 292.8 175.0
CA CB CG CD2 55.2 295.0
CA CB CG HG 173.6 55.0
HB1 CB CA HB2 235.1 240.0
C1 CA C CB 230.3 240.0
C1 CA C HA 112.0 120.0
CB CA C HA 241.7 240.0
C CA CB CG 140.1 175.0
C CA CB HB1 260.1 295.0
C CA CB HB2 25.0 55.0
O C CA N1 178.7 180.0
CA C N1 CA1 178.7 175.0
CA C N1 H 358.7 355.1
C1 CA HA CB 119.1 120.0
C1 CA HA C 237.6 240.0
CB CA HA C 118.4 120.0
HA CA CB CG 25.8 55.0
HA CA CB HB1 145.8 175.0
HA CA CB HB2 270.7 295.0
HA CA C O 8.6 139.5
HA CA C N1 189.8 319.5
CG CB CA C 140.1 175.0
CG CB CA HA 25.8 55.0
CA CB CG HB1 120.0 120.0
CA CB CG HB2 244.9 240.0
HB1 CB CG HB2 124.9 120.0
CD1 CG CB CD2 237.6 240.0
CD1 CG CB HG 119.2 120.0
CB CG CD1 HD11 186.4 59.9
CB CG CD1 HD12 306.4 180.0
CB CG CD1 HD13 66.4 300.0
CD2 CG CB HG 241.6 240.0
CB CG CD2 HD21 132.2 300.0
CB CG CD2 HD22 252.2 60.0
CB CG CD2 HD23 12.2 180.0
HB1 CB CA C 260.1 295.0
HB1 CB CA HA 145.8 175.0
CA CB HB1 CG 231.7 240.0
CA CB HB1 HB2 115.8 120.0
CG CB HB1 HB2 244.1 240.0
HB1 CB CG CD1 172.8 55.0
HB1 CB CG CD2 295.2 175.0
HB1 CB CG HG 53.6 295.0
HB2 CB CA C 25.0 55.0
HB2 CB CA HA 270.7 295.0
CA CB HB2 CG 125.8 120.0
CA CB HB2 HB1 242.9 240.0
CG CB HB2 HB1 117.1 120.0
HB2 CB CG CD1 47.9 295.0
HB2 CB CG CD2 170.3 55.0
HB2 CB CG HG 288.7 175.0
CD1 CG CB HB1 172.8 55.0
CD1 CG CB HB2 47.9 295.0
CB CG CD1 CD2 123.8 120.0
CB CG CD1 HG 242.3 240.0
CD2 CG CD1 HG 118.5 120.0
CD1 CG CD2 HD21 255.3 60.0
CD1 CG CD2 HD22 15.3 180.1
CD1 CG CD2 HD23 135.3 300.0
HD11 CD1 CG HD12 240.0 239.9
HD11 CD1 CG HD13 120.0 119.9
HD12 CD1 CG HD13 240.0 240.0
CD2 CG CB HB1 295.2 175.0
CD2 CG CB HB2 170.3 55.0
CB CG CD2 CD1 236.9 240.0
CB CG CD2 HG 117.7 120.0
CD1 CG CD2 HG 240.7 240.0
CD2 CG CD1 HD11 62.6 300.0
CD2 CG CD1 HD12 182.6 60.0
CD2 CG CD1 HD13 302.6 180.1
HD21 CD2 CG HD22 240.0 239.9
HD21 CD2 CG HD23 120.0 120.0
HD22 CD2 CG HD23 240.0 240.1
HG CG CB HB1 53.6 295.0
HG CG CB HB2 288.7 175.0
CB CG HG CD1 120.0 120.1
CB CG HG CD2 239.3 240.1
CD1 CG HG CD2 119.3 120.0
HG CG CD1 HD11 304.1 179.9
HG CG CD1 HD12 64.1 300.0
HG CG CD1 HD13 184.1 60.1
HG CG CD2 HD21 14.5 180.0
HG CG CD2 HD22 134.6 300.1
HG CG CD2 HD23 254.6 60.0
HD11 CD1 CG CD2 62.6 300.0
HD11 CD1 CG HG 304.1 179.9
CG CD1 HD11 HD12 120.0 120.1
CG CD1 HD11 HD13 240.0 240.1
HD12 CD1 HD11 HD13 120.0 120.0
HD12 CD1 CG CD2 182.6 60.0
HD12 CD1 CG HG 64.1 300.0
CG CD1 HD12 HD11 240.0 239.9
CG CD1 HD12 HD13 120.0 120.0
HD11 CD1 HD12 HD13 240.0 240.1
HD13 CD1 CG CD2 302.6 180.1
HD13 CD1 CG HG 184.1 60.1
CG CD1 HD13 HD11 120.0 120.0
CG CD1 HD13 HD12 240.0 240.0
HD11 CD1 HD13 HD12 120.0 120.0
HD21 CD2 CG HG 14.5 180.0
CG CD2 HD21 HD22 120.0 120.0
CG CD2 HD21 HD23 240.0 240.1
HD22 CD2 HD21 HD23 120.0 120.0
HD22 CD2 CG HG 134.6 300.1
CG CD2 HD22 HD21 240.0 240.0
CG CD2 HD22 HD23 120.0 119.9
HD21 CD2 HD22 HD23 240.0 239.9
HD23 CD2 CG HG 254.6 60.0
CG CD2 HD23 HD21 120.0 120.0
CG CD2 HD23 HD22 240.0 240.1
HD21 CD2 HD23 HD22 120.0 120.1
O C CA HA 8.6 139.5
CA C O N1 181.4 180.0
O C N1 CA1 0.1 354.9
O C N1 H 180.0 175.0
C N1 CA1 H 180.0 180.1
C2 CA1 N1 CB1 122.5 120.0
C2 CA1 N1 HA1 240.9 240.0
N1 CA1 C2 O2 192.7 0.1
N1 CA1 C2 N2 12.3 180.0
CB1 CA1 N1 HA1 118.4 120.0
N1 CA1 CB1 CG1 193.4 293.7
N1 CA1 CB1 HB21 313.4 53.6
N1 CA1 CB1 HB3 74.8 173.6
H N1 CA1 C2 79.0 48.5
H N1 CA1 CB1 316.5 288.6
H N1 CA1 HA1 198.1 168.5
C N1 H CA1 180.0 179.9
C2 CA1 N1 H 79.0 48.5
N1 CA1 C2 CB1 237.7 240.0
N1 CA1 C2 HA1 119.3 120.1
C N1 CA1 C2 258.9 228.6
CB1 CA1 C2 HA1 241.6 240.0
C2 CA1 CB1 CG1 71.7 173.6
C2 CA1 CB1 HB21 191.7 293.6
C2 CA1 CB1 HB3 313.0 53.6
O2 C2 CA1 N2 180.4 180.0
CA1 C2 N2 C3 179.1 180.0
CA1 C2 N2 HN2 359.1 360.0
CB1 CA1 N1 H 316.5 288.6
N1 CA1 CB1 C2 121.7 120.0
N1 CA1 CB1 HA1 240.8 239.9
C N1 CA1 CB1 136.5 108.7
C2 CA1 CB1 HA1 119.0 119.9
CB1 CA1 C2 O2 315.0 120.1
CB1 CA1 C2 N2 134.6 300.0
CG1 CB1 CA1 HB21 240.0 240.0
CG1 CB1 CA1 HB3 118.6 120.0
CA1 CB1 CG1 OD1 76.1 351.9
CA1 CB1 CG1 OD2 256.0 171.9
HB21 CB1 CA1 HB3 238.6 240.0
HA1 CA1 N1 H 198.1 168.5
N1 CA1 HA1 C2 240.5 240.0
N1 CA1 HA1 CB1 120.2 120.0
C N1 CA1 HA1 18.0 348.6
C2 CA1 HA1 CB1 239.7 240.1
HA1 CA1 C2 O2 73.4 240.0
HA1 CA1 C2 N2 253.0 60.0
HA1 CA1 CB1 CG1 312.7 53.7
HA1 CA1 CB1 HB21 72.7 173.7
HA1 CA1 CB1 HB3 194.0 293.7
O2 C2 CA1 CB1 315.0 120.1
O2 C2 CA1 HA1 73.4 240.0
CA1 C2 O2 N2 179.6 180.0
O2 C2 N2 C3 358.7 360.0
O2 C2 N2 HN2 178.7 180.0
CG1 CB1 CA1 HA1 312.7 53.7
CA1 CB1 CG1 HB21 120.0 119.9
CA1 CB1 CG1 HB3 241.4 240.0
HB21 CB1 CG1 HB3 121.4 120.1
OD1 CG1 CB1 OD2 180.2 180.0
CB1 CG1 OD2 HD2 180.2 180.0
HB21 CB1 CA1 HA1 72.7 173.7
CA1 CB1 HB21 CG1 237.4 240.0
CA1 CB1 HB21 HB3 118.7 120.0
CG1 CB1 HB21 HB3 241.3 239.9
HB21 CB1 CG1 OD1 316.1 232.0
HB21 CB1 CG1 OD2 136.0 52.0
HB3 CB1 CA1 HA1 194.0 293.7
CA1 CB1 HB3 CG1 121.8 120.0
CA1 CB1 HB3 HB21 240.9 240.0
CG1 CB1 HB3 HB21 119.1 120.1
HB3 CB1 CG1 OD1 194.8 111.9
HB3 CB1 CG1 OD2 14.6 291.9
OD1 CG1 CB1 HB21 316.1 232.0
OD1 CG1 CB1 HB3 194.8 111.9
CB1 CG1 OD1 OD2 179.8 180.0
OD1 CG1 OD2 HD2 360.0 360.0
OD2 CG1 CB1 HB21 136.0 52.0
OD2 CG1 CB1 HB3 14.6 291.9
CB1 CG1 OD2 OD1 180.2 180.0
C2 N2 C3 HN2 180.0 180.0
C11 C3 N2 H1 240.0 240.0
C11 C3 N2 H2A 111.5 120.0
N2 C3 C11 C21 200.0 90.0
N2 C3 C11 C6 21.6 269.8
H1 C3 N2 H2A 231.5 240.1
HN2 N2 C3 C11 249.6 0.0
HN2 N2 C3 H1 9.6 120.0
HN2 N2 C3 H2A 138.1 240.0
C2 N2 HN2 C3 180.0 180.0
C11 C3 N2 HN2 249.6 0.0
N2 C3 C11 H1 120.0 120.0
N2 C3 C11 H2A 248.5 240.0
C2 N2 C3 C11 69.6 180.0
H1 C3 C11 H2A 128.5 120.0
C21 C11 C3 C6 178.4 180.2
C3 C11 C21 C31 181.8 180.0
C3 C11 C21 H2 1.7 0.0
C3 C11 C6 C5 178.3 179.8
C3 C11 C6 H6 358.3 359.9
H1 C3 N2 HN2 9.6 120.0
N2 C3 H1 C11 226.8 240.0
N2 C3 H1 H2A 113.4 119.9
C2 N2 C3 H1 189.6 300.0
C11 C3 H1 H2A 246.6 240.0
H1 C3 C11 C21 79.9 330.0
H1 C3 C11 C6 261.6 149.8
H2A C3 N2 HN2 138.1 240.0
N2 C3 H2A C11 129.5 120.0
N2 C3 H2A H1 244.7 240.1
C2 N2 C3 H2A 318.1 60.0
C11 C3 H2A H1 115.2 120.0
H2A C3 C11 C21 311.5 210.0
H2A C3 C11 C6 133.1 29.7
C21 C11 C3 H1 79.9 330.0
C21 C11 C3 H2A 311.5 210.0
C3 C11 C21 C6 181.6 179.8
C21 C11 C6 C5 359.9 359.6
C21 C11 C6 H6 179.9 179.7
C31 C21 C11 H2 180.0 180.0
C11 C21 C31 C4 360.0 0.0
C11 C21 C31 H3 180.0 179.9
C6 C11 C3 H1 261.6 149.8
C6 C11 C3 H2A 133.1 29.7
C3 C11 C6 C21 178.4 180.2
C6 C11 C21 C31 0.2 0.2
C6 C11 C21 H2 180.1 180.2
C4 C5 C6 C11 360.0 0.4
C11 C6 C5 H5 180.0 180.2
C5 C6 C11 H6 180.0 179.9
C31 C21 C11 C6 0.2 0.2
C11 C21 C31 H2 180.0 180.0
C4 C31 C21 H3 180.0 180.1
C21 C31 C4 C5 359.8 360.0
C21 C31 C4 H4 179.8 179.9
H2 C21 C11 C6 180.1 180.2
C11 C21 H2 C31 180.0 180.0
H2 C21 C31 C4 180.0 180.0
H2 C21 C31 H3 0.0 359.9
C4 C31 C21 H2 180.0 180.0
C21 C31 C4 H3 180.0 179.9
C5 C4 C31 H4 180.0 180.1
C31 C4 C5 C6 0.2 359.8
C31 C4 C5 H5 180.2 180.0
H3 C31 C21 H2 0.0 359.9
C21 C31 H3 C4 180.0 180.1
H3 C31 C4 C5 179.8 180.1
H3 C31 C4 H4 359.8 0.0
C11 C6 C5 C4 360.0 0.4
C5 C4 C31 H3 179.8 180.1
C31 C4 C5 H4 180.0 179.9
C6 C5 C4 H5 180.0 179.8
C4 C5 C6 H6 180.0 180.3
H4 C4 C31 H3 359.8 0.0
C31 C4 H4 C5 180.0 180.1
H4 C4 C5 C6 180.2 179.8
H4 C4 C5 H5 0.2 0.0
C11 C6 C5 H6 180.0 180.1
C6 C5 C4 H4 180.2 179.8
C4 C5 C6 H5 180.0 180.2
H5 C5 C4 H4 0.2 0.0
C4 C5 H5 C6 180.0 179.8
H5 C5 C6 H6 360.0 0.1
C11 C6 H6 C5 180.0 179.9
H6 C6 C5 H5 360.0 0.1
N1 C CA HA 189.8 319.5
CA C N1 O 178.7 180.0
CA1 N1 C H 180.0 179.9
N2 C2 CA1 CB1 134.6 300.0
N2 C2 CA1 HA1 253.0 60.0
CA1 C2 N2 O2 180.4 180.0
C3 N2 C2 HN2 180.0 180.0