PDB Chemical Component 0YV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0YV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAI |
CAK |
1.384 |
1.381 |
| CAI |
CAJ |
1.381 |
1.381 |
| CAK |
CAZ |
1.384 |
1.398 |
| CAJ |
CAY |
1.368 |
1.399 |
| CAZ |
CAF |
1.447 |
1.432 |
| CAZ |
CAP |
1.397 |
1.394 |
| CAY |
CAP |
1.382 |
1.395 |
| CAY |
CAE |
1.384 |
1.431 |
| CAF |
CAH |
0.913 |
1.173 |
| CAE |
CAG |
1.299 |
1.175 |
| CAH |
CBB |
1.531 |
1.433 |
| BRC |
CAW |
1.908 |
1.891 |
| BRD |
CAX |
1.863 |
1.891 |
| CAM |
CBB |
1.391 |
1.397 |
| CAM |
CAX |
1.394 |
1.380 |
| CAG |
CBA |
1.425 |
1.432 |
| CAL |
CAW |
1.383 |
1.380 |
| CAL |
CBA |
1.373 |
1.397 |
| CBB |
CAR |
1.392 |
1.397 |
| CAX |
CAO |
1.368 |
1.385 |
| CAW |
CAN |
1.364 |
1.385 |
| CBA |
CAQ |
1.371 |
1.397 |
| CAR |
CBD |
1.393 |
1.380 |
| CAO |
CBD |
1.391 |
1.383 |
| CAN |
CBC |
1.394 |
1.384 |
| CAQ |
CBC |
1.370 |
1.379 |
| CBD |
CAV |
1.383 |
1.507 |
| CBC |
CAU |
1.390 |
1.507 |
| CAV |
CAT |
1.529 |
1.530 |
| CAU |
CAS |
1.521 |
1.530 |
| CAT |
NAB |
1.469 |
1.469 |
| CAS |
NAA |
1.475 |
1.469 |
| NAA |
H1 |
1.001 |
1.009 |
| NAA |
H2 |
1.000 |
1.009 |
| CAS |
H4 |
1.100 |
1.090 |
| CAS |
H5 |
1.100 |
1.090 |
| CAU |
H6 |
1.100 |
1.090 |
| CAU |
H7 |
1.100 |
1.090 |
| CAQ |
H8 |
1.080 |
1.080 |
| CAN |
H9 |
1.080 |
1.080 |
| CAL |
H10 |
1.080 |
1.080 |
| CAP |
H11 |
1.080 |
1.080 |
| CAJ |
H12 |
1.080 |
1.079 |
| CAI |
H13 |
1.080 |
1.080 |
| CAK |
H14 |
1.080 |
1.080 |
| CAR |
H15 |
1.080 |
1.080 |
| CAM |
H16 |
1.080 |
1.080 |
| CAO |
H17 |
1.080 |
1.080 |
| CAV |
H18 |
1.100 |
1.090 |
| CAV |
H19 |
1.100 |
1.090 |
| CAT |
H20 |
1.100 |
1.090 |
| CAT |
H21 |
1.100 |
1.090 |
| NAB |
H22 |
1.000 |
1.010 |
| NAB |
H23 |
1.000 |
1.009 |
Bond Angles for 0YV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAI |
CAK |
CAZ |
119.5 |
120.2 |
| CAK |
CAI |
H13 |
120.4 |
119.9 |
| CAI |
CAK |
H14 |
120.3 |
119.9 |
| CAI |
CAJ |
H12 |
118.7 |
119.9 |
| CAK |
CAZ |
CAF |
120.1 |
120.1 |
| CAZ |
CAK |
H14 |
120.3 |
119.9 |
| CAZ |
CAF |
CAH |
178.0 |
179.9 |
| CAZ |
CAP |
H11 |
119.5 |
120.2 |
| CAY |
CAP |
H11 |
119.5 |
120.1 |
| CAF |
CAH |
CBB |
178.7 |
180.0 |
| CAH |
CBB |
CAR |
120.4 |
120.2 |
| BRD |
CAX |
CAO |
119.5 |
119.9 |
| CAM |
CAX |
CAO |
119.1 |
120.1 |
| CAX |
CAM |
H16 |
119.2 |
120.0 |
| CBA |
CAL |
H10 |
117.6 |
120.1 |
| CBB |
CAR |
CBD |
119.7 |
119.8 |
| CBB |
CAR |
H15 |
120.2 |
120.1 |
| CAX |
CAO |
CBD |
120.3 |
120.4 |
| CAX |
CAO |
H17 |
119.8 |
119.8 |
| CAW |
CAN |
H9 |
119.9 |
119.8 |
| CBA |
CAQ |
H8 |
119.4 |
120.1 |
| CAR |
CBD |
CAO |
120.6 |
120.2 |
| CAR |
CBD |
CAV |
120.5 |
119.9 |
| CBD |
CAR |
H15 |
120.2 |
120.1 |
| CAO |
CBD |
CAV |
118.9 |
119.9 |
| CBD |
CAO |
H17 |
119.9 |
119.9 |
| CBD |
CAV |
CAT |
110.1 |
109.4 |
| CBD |
CAV |
H18 |
109.3 |
109.4 |
| CBD |
CAV |
H19 |
109.3 |
109.4 |
| CBC |
CAU |
H6 |
109.1 |
109.4 |
| CBC |
CAU |
H7 |
109.1 |
109.5 |
| CAV |
CAT |
NAB |
116.5 |
109.4 |
| CAT |
CAV |
H18 |
109.3 |
109.5 |
| CAT |
CAV |
H19 |
109.3 |
109.5 |
| CAV |
CAT |
H20 |
107.7 |
109.5 |
| CAV |
CAT |
H21 |
107.7 |
109.5 |
| CAU |
CAS |
H4 |
108.4 |
109.5 |
| CAU |
CAS |
H5 |
108.4 |
109.5 |
| NAB |
CAT |
H20 |
107.7 |
109.5 |
| NAB |
CAT |
H21 |
107.7 |
109.5 |
| CAT |
NAB |
H22 |
109.5 |
111.0 |
| CAT |
NAB |
H23 |
109.5 |
111.0 |
| CAS |
NAA |
H1 |
109.5 |
111.0 |
| CAS |
NAA |
H2 |
109.5 |
111.0 |
| H1 |
NAA |
H2 |
109.5 |
111.0 |
| H4 |
CAS |
H5 |
109.5 |
109.4 |
| H6 |
CAU |
H7 |
109.4 |
109.5 |
| H18 |
CAV |
H19 |
109.5 |
109.5 |
| H20 |
CAT |
H21 |
109.5 |
109.5 |
| H22 |
NAB |
H23 |
109.4 |
111.0 |
Torsion Angles for 0YV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAK |
CAI |
CAJ |
H12 |
178.1 |
180.0 |
| CAI |
CAK |
CAZ |
CAF |
180.6 |
180.0 |
| CAZ |
CAK |
CAI |
H14 |
180.0 |
179.7 |
| CAZ |
CAK |
CAI |
H13 |
181.2 |
180.0 |
| CAI |
CAK |
CAZ |
H14 |
180.0 |
180.3 |
| CAK |
CAZ |
CAF |
CAH |
216.7 |
236.6 |
| CAK |
CAZ |
CAP |
H11 |
180.0 |
179.4 |
| CAJ |
CAY |
CAP |
H11 |
179.4 |
180.3 |
| CAF |
CAZ |
CAK |
H14 |
0.7 |
359.8 |
| CAF |
CAZ |
CAP |
H11 |
359.1 |
359.9 |
| CAZ |
CAF |
CAH |
CBB |
336.2 |
219.2 |
| CAY |
CAP |
CAZ |
H11 |
180.0 |
180.0 |
| CAZ |
CAP |
CAY |
H11 |
180.0 |
180.0 |
| CAF |
CAH |
CBB |
CAR |
15.2 |
84.2 |
| CAH |
CBB |
CAR |
CBD |
181.0 |
180.0 |
| CAH |
CBB |
CAR |
H15 |
1.0 |
360.0 |
| BRC |
CAW |
CAN |
H9 |
359.4 |
0.0 |
| CAM |
CAX |
BRD |
CAO |
180.6 |
180.0 |
| BRD |
CAX |
CAM |
H16 |
359.7 |
0.0 |
| BRD |
CAX |
CAO |
CBD |
180.3 |
180.3 |
| BRD |
CAX |
CAO |
H17 |
0.3 |
0.0 |
| CAM |
CBB |
CAR |
CBD |
1.1 |
0.3 |
| CAM |
CBB |
CAR |
H15 |
181.1 |
180.3 |
| BRD |
CAX |
CAM |
CAO |
179.4 |
180.0 |
| CAM |
CAX |
CAO |
CBD |
359.7 |
0.2 |
| CAM |
CAX |
CAO |
H17 |
179.7 |
180.0 |
| CAG |
CBA |
CAL |
H10 |
0.7 |
0.3 |
| CAG |
CBA |
CAQ |
H8 |
358.5 |
359.7 |
| CAL |
CAW |
CAN |
H9 |
180.3 |
180.0 |
| CAL |
CBA |
CAQ |
H8 |
179.1 |
180.1 |
| CBB |
CAR |
CBD |
CAO |
358.9 |
360.0 |
| CBB |
CAR |
CBD |
CAV |
179.1 |
180.0 |
| CBD |
CAR |
CBB |
H15 |
180.0 |
180.0 |
| CAO |
CAX |
CAM |
H16 |
180.3 |
180.1 |
| CAR |
CBD |
CAO |
CAX |
0.7 |
359.8 |
| CAX |
CAO |
CBD |
CAV |
180.5 |
179.7 |
| CBD |
CAO |
CAX |
H17 |
180.0 |
180.3 |
| CBB |
CAR |
CBD |
H15 |
180.0 |
180.0 |
| CAX |
CAO |
CBD |
CAR |
0.7 |
359.8 |
| CAO |
CBD |
CAR |
CAV |
179.8 |
180.0 |
| CAR |
CBD |
CAO |
H17 |
180.7 |
180.0 |
| CAR |
CBD |
CAV |
CAT |
255.2 |
90.0 |
| CAR |
CBD |
CAV |
H18 |
15.3 |
210.0 |
| CAR |
CBD |
CAV |
H19 |
135.2 |
330.0 |
| CAX |
CAO |
CBD |
H17 |
180.0 |
179.7 |
| CAR |
CBD |
CAO |
CAV |
180.2 |
180.0 |
| CAO |
CBD |
CAR |
H15 |
178.9 |
180.0 |
| CAO |
CBD |
CAV |
CAT |
75.4 |
270.0 |
| CAO |
CBD |
CAV |
H18 |
195.5 |
30.0 |
| CAO |
CBD |
CAV |
H19 |
315.3 |
150.0 |
| CAN |
CBC |
CAU |
H6 |
107.2 |
149.7 |
| CAN |
CBC |
CAU |
H7 |
226.7 |
29.8 |
| CAQ |
CBC |
CAU |
H6 |
288.5 |
330.0 |
| CAQ |
CBC |
CAU |
H7 |
48.0 |
210.0 |
| CAR |
CBD |
CAV |
CAO |
179.8 |
180.0 |
| CAV |
CBD |
CAR |
H15 |
359.1 |
0.0 |
| CAV |
CBD |
CAO |
H17 |
0.5 |
360.0 |
| CBD |
CAV |
CAT |
NAB |
110.2 |
180.0 |
| CAT |
CAV |
CBD |
H18 |
239.9 |
240.0 |
| CAT |
CAV |
CBD |
H19 |
120.1 |
120.0 |
| CBD |
CAV |
CAT |
H20 |
231.2 |
300.0 |
| CBD |
CAV |
CAT |
H21 |
349.2 |
60.0 |
| H18 |
CAV |
CBD |
H19 |
240.1 |
240.0 |
| CBC |
CAU |
CAS |
H4 |
262.2 |
60.0 |
| CBC |
CAU |
CAS |
H5 |
21.0 |
300.0 |
| H6 |
CAU |
CBC |
H7 |
240.5 |
120.0 |
| CBD |
CAV |
CAT |
H18 |
120.1 |
120.0 |
| CBD |
CAV |
CAT |
H19 |
239.9 |
240.0 |
| NAB |
CAT |
CAV |
H20 |
239.0 |
240.0 |
| NAB |
CAT |
CAV |
H21 |
121.0 |
120.0 |
| CAV |
CAT |
NAB |
H22 |
180.0 |
56.0 |
| CAV |
CAT |
NAB |
H23 |
300.0 |
180.0 |
| H18 |
CAV |
CAT |
H19 |
119.8 |
120.1 |
| H20 |
CAT |
CAV |
H21 |
242.0 |
240.0 |
| CAU |
CAS |
NAA |
H1 |
180.0 |
180.0 |
| CAU |
CAS |
NAA |
H2 |
300.0 |
304.0 |
| H4 |
CAS |
CAU |
H5 |
241.3 |
120.0 |
| NAB |
CAT |
CAV |
H18 |
350.2 |
60.0 |
| NAB |
CAT |
CAV |
H19 |
230.3 |
300.0 |
| CAV |
CAT |
NAB |
H20 |
121.0 |
120.0 |
| CAV |
CAT |
NAB |
H21 |
239.0 |
240.0 |
| H20 |
CAT |
NAB |
H21 |
118.0 |
120.0 |
| H22 |
NAB |
CAT |
H23 |
240.0 |
236.1 |
| H1 |
NAA |
CAS |
H2 |
240.0 |
236.0 |
| CAS |
NAA |
H1 |
H2 |
120.0 |
123.9 |
| CAS |
NAA |
H2 |
H1 |
240.0 |
236.0 |
| CAU |
CAS |
H4 |
H5 |
118.1 |
240.0 |
| H4 |
CAS |
NAA |
H1 |
59.4 |
300.1 |
| H4 |
CAS |
NAA |
H2 |
179.4 |
64.0 |
| CAU |
CAS |
H5 |
H4 |
241.9 |
120.0 |
| H5 |
CAS |
NAA |
H1 |
300.6 |
60.0 |
| H5 |
CAS |
NAA |
H2 |
60.6 |
184.0 |
| CBC |
CAU |
H6 |
H7 |
119.3 |
240.0 |
| H6 |
CAU |
CAS |
H4 |
142.0 |
180.0 |
| H6 |
CAU |
CAS |
H5 |
260.8 |
60.0 |
| CBC |
CAU |
H7 |
H6 |
240.7 |
120.0 |
| H7 |
CAU |
CAS |
H4 |
22.5 |
300.0 |
| H7 |
CAU |
CAS |
H5 |
141.2 |
180.0 |
| H13 |
CAI |
CAK |
CAZ |
181.2 |
180.0 |
| H13 |
CAI |
CAK |
H14 |
1.2 |
0.3 |
| H13 |
CAI |
CAJ |
H12 |
358.1 |
359.7 |
| CAI |
CAK |
H14 |
CAZ |
180.0 |
179.7 |
| H14 |
CAK |
CAI |
H13 |
1.2 |
0.3 |
| H14 |
CAK |
CAZ |
CAF |
0.7 |
359.8 |
| CBB |
CAR |
H15 |
CBD |
180.0 |
180.0 |
| H15 |
CAR |
CBD |
CAO |
178.9 |
180.0 |
| H15 |
CAR |
CBD |
CAV |
359.1 |
0.0 |
| H16 |
CAM |
CAX |
CAO |
180.3 |
180.1 |
| CAX |
CAO |
H17 |
CBD |
180.0 |
180.3 |
| H17 |
CAO |
CBD |
CAV |
0.5 |
360.0 |
| CBD |
CAV |
H18 |
CAT |
239.5 |
240.0 |
| CBD |
CAV |
H18 |
H19 |
119.8 |
120.0 |
| H18 |
CAV |
CAT |
NAB |
350.2 |
60.0 |
| CAT |
CAV |
H18 |
H19 |
240.3 |
239.9 |
| H18 |
CAV |
CAT |
H20 |
111.2 |
180.0 |
| H18 |
CAV |
CAT |
H21 |
229.1 |
300.0 |
| CBD |
CAV |
H19 |
CAT |
120.5 |
120.0 |
| CBD |
CAV |
H19 |
H18 |
240.3 |
240.0 |
| H19 |
CAV |
CAT |
NAB |
230.3 |
300.0 |
| CAT |
CAV |
H19 |
H18 |
119.7 |
120.1 |
| H19 |
CAV |
CAT |
H20 |
351.3 |
59.9 |
| H19 |
CAV |
CAT |
H21 |
109.3 |
180.0 |
| CAV |
CAT |
H20 |
NAB |
233.6 |
240.0 |
| H20 |
CAT |
CAV |
H18 |
111.2 |
180.0 |
| H20 |
CAT |
CAV |
H19 |
351.3 |
59.9 |
| CAV |
CAT |
H20 |
H21 |
116.8 |
120.0 |
| NAB |
CAT |
H20 |
H21 |
243.2 |
240.0 |
| H20 |
CAT |
NAB |
H22 |
59.0 |
296.1 |
| H20 |
CAT |
NAB |
H23 |
179.0 |
60.0 |
| CAV |
CAT |
H21 |
NAB |
126.4 |
120.0 |
| H21 |
CAT |
CAV |
H18 |
229.1 |
300.0 |
| H21 |
CAT |
CAV |
H19 |
109.3 |
180.0 |
| CAV |
CAT |
H21 |
H20 |
243.2 |
240.0 |
| NAB |
CAT |
H21 |
H20 |
116.8 |
120.0 |
| H21 |
CAT |
NAB |
H22 |
301.0 |
176.0 |
| H21 |
CAT |
NAB |
H23 |
61.0 |
300.0 |
| H22 |
NAB |
CAT |
H20 |
59.0 |
296.1 |
| H22 |
NAB |
CAT |
H21 |
301.0 |
176.0 |
| CAT |
NAB |
H22 |
H23 |
120.0 |
123.9 |
| H23 |
NAB |
CAT |
H20 |
179.0 |
60.0 |
| H23 |
NAB |
CAT |
H21 |
61.0 |
300.0 |
| CAT |
NAB |
H23 |
H22 |
239.9 |
236.1 |