PDB Chemical Component 0YH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0YH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O34 C6 1.438 1.429
O34 C19 1.369 1.358
C4 C26 1.539 1.530
C3 C26 1.532 1.530
C11 C19 1.395 1.387
C11 C12 1.386 1.379
C19 C13 1.405 1.388
C26 C5 1.531 1.530
C26 C22 1.516 1.507
C12 C20 1.405 1.393
C13 C17 1.389 1.379
C22 C15 1.401 1.398
C22 N29 1.311 1.309
C15 C24 1.376 1.361
C20 C17 1.415 1.394
C20 C21 1.489 1.485
C17 C2 1.508 1.507
O33 C25 1.217 1.215
C14 C21 1.417 1.407
C14 C23 1.362 1.359
C21 N28 1.309 1.316
N29 N32 1.398 1.401
C24 N31 1.404 1.395
C24 N32 1.372 1.361
C25 N31 1.350 1.347
C25 N30 1.348 1.348
C23 N30 1.392 1.396
C23 N27 1.354 1.358
N32 C18 1.403 1.401
N28 N27 1.388 1.401
C18 C10 1.407 1.389
C18 C9 1.399 1.388
C10 C8 1.391 1.381
C9 C7 1.398 1.382
C8 C16 1.395 1.382
C7 C16 1.391 1.383
C16 C1 1.513 1.507
C1 H1 1.100 1.090
C1 H2 1.100 1.090
C1 H3 1.100 1.090
C2 H4 1.100 1.090
C2 H5 1.100 1.089
C2 H6 1.100 1.089
C3 H7 1.100 1.089
C3 H8 1.100 1.090
C3 H9 1.100 1.090
C4 H10 1.100 1.091
C4 H11 1.100 1.090
C4 H12 1.100 1.089
C5 H13 1.100 1.090
C5 H14 1.100 1.090
C5 H15 1.100 1.091
C6 H16 1.100 1.090
C6 H17 1.100 1.090
C6 H18 1.100 1.090
C7 H19 1.080 1.080
C8 H20 1.080 1.080
C9 H21 1.080 1.080
C10 H22 1.080 1.080
C11 H23 1.080 1.080
C12 H24 1.080 1.080
C13 H25 1.080 1.080
C14 H26 1.080 1.080
C15 H27 1.080 1.080
N27 H28 1.000 0.970
N30 H29 1.000 0.970
N31 H30 1.000 0.970

Bond Angles for 0YH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O34 C6 H16 109.5 109.5
O34 C6 H17 109.5 109.5
O34 C6 H18 109.5 109.4
C3 C26 C4 109.0 109.4
C4 C26 C5 108.0 109.5
C4 C26 C22 114.1 109.5
C26 C4 H10 109.5 109.5
C26 C4 H11 109.5 109.4
C26 C4 H12 109.5 109.5
C3 C26 C5 109.2 109.5
C3 C26 C22 107.0 109.5
C26 C3 H7 109.5 109.5
C26 C3 H8 109.4 109.4
C26 C3 H9 109.5 109.5
C12 C11 C19 120.4 120.1
C11 C19 C13 119.2 120.1
C19 C11 H23 119.8 120.0
C11 C12 C20 120.6 119.9
C12 C11 H23 119.8 119.9
C11 C12 H24 119.7 120.0
C19 C13 H25 119.4 120.0
C26 C5 H13 109.5 109.5
C26 C5 H14 109.5 109.5
C26 C5 H15 109.5 109.5
C26 C22 N29 123.6 125.8
C12 C20 C17 119.4 119.9
C12 C20 C21 117.2 120.1
C20 C12 H24 119.7 120.0
C17 C13 H25 119.4 119.9
C22 C15 C24 108.3 107.9
C22 C15 H27 125.9 126.0
C22 N29 N32 109.9 108.4
C15 C24 N31 128.2 126.3
C15 C24 N32 107.0 107.5
C24 C15 H27 125.8 126.1
C14 C21 C20 127.3 125.9
C20 C21 N28 124.6 125.9
C17 C2 H4 109.5 109.5
C17 C2 H5 109.5 109.4
C17 C2 H6 109.4 109.4
C21 C14 C23 106.9 107.8
C14 C21 N28 108.0 108.2
C21 C14 H26 126.5 126.1
C14 C23 N30 129.7 126.1
C14 C23 N27 108.0 107.7
C23 C14 H26 126.5 126.1
C21 N28 N27 108.8 108.2
C24 N32 N29 107.2 107.8
N31 C24 N32 124.7 126.3
C24 N31 C25 126.2 120.0
C24 N31 H30 116.9 120.0
N30 C25 N31 116.3 120.0
C25 N31 H30 116.9 120.0
C23 N30 C25 126.9 120.0
C25 N30 H29 116.6 120.0
N27 C23 N30 122.3 126.1
C23 N30 H29 116.5 120.0
C23 N27 H28 125.9 126.0
N28 N27 H28 125.9 125.9
C18 C10 H22 119.8 120.0
C18 C9 H21 120.2 120.0
C10 C8 C16 119.6 120.1
C10 C8 H20 120.2 119.9
C9 C7 C16 120.2 120.0
C9 C7 H19 119.9 120.0
C7 C16 C8 120.5 120.2
C16 C8 H20 120.2 120.0
C16 C7 H19 119.9 120.0
C16 C1 H1 109.5 109.5
C16 C1 H2 109.5 109.5
C16 C1 H3 109.5 109.5
H1 C1 H2 109.5 109.5
H1 C1 H3 109.5 109.5
H2 C1 H3 109.5 109.4
H4 C2 H5 109.5 109.5
H4 C2 H6 109.5 109.5
H5 C2 H6 109.5 109.5
H7 C3 H8 109.5 109.5
H7 C3 H9 109.5 109.5
H8 C3 H9 109.5 109.5
H10 C4 H11 109.5 109.4
H10 C4 H12 109.4 109.5
H11 C4 H12 109.5 109.5
H13 C5 H14 109.4 109.5
H13 C5 H15 109.5 109.5
H14 C5 H15 109.5 109.4
H16 C6 H17 109.4 109.5
H16 C6 H18 109.5 109.4
H17 C6 H18 109.5 109.5

Torsion Angles for 0YH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H16 C6 O34 H17 240.0 240.0
H16 C6 O34 H18 120.0 119.9
H17 C6 O34 H18 240.0 239.9
C19 O34 C6 H16 180.0 180.0
C19 O34 C6 H17 300.0 299.9
C19 O34 C6 H18 60.0 60.0
O34 C19 C11 H23 1.1 0.2
O34 C19 C13 H25 359.8 0.0
C3 C26 C4 C5 118.5 120.0
C3 C26 C4 C22 240.5 240.0
C4 C26 C3 H7 180.0 60.0
C4 C26 C3 H8 300.0 180.0
C4 C26 C3 H9 60.0 300.0
C4 C26 C5 H13 180.0 180.0
C4 C26 C5 H14 300.0 300.0
C4 C26 C5 H15 60.0 60.0
C4 C26 C22 N29 157.0 135.1
H10 C4 C26 H11 240.0 240.1
H10 C4 C26 H12 120.0 120.0
H11 C4 C26 H12 240.0 239.9
C4 C26 C3 C5 242.2 240.0
C4 C26 C3 C22 123.8 120.0
C3 C26 C4 H10 180.0 60.0
C3 C26 C4 H11 300.0 180.0
C3 C26 C4 H12 60.0 300.0
C3 C26 C5 H13 61.6 60.0
C3 C26 C5 H14 181.6 180.1
C3 C26 C5 H15 301.6 300.0
C3 C26 C22 N29 277.6 255.0
H7 C3 C26 H8 240.0 240.0
H7 C3 C26 H9 120.0 120.0
H8 C3 C26 H9 240.0 240.0
C19 C11 C12 C20 359.3 360.0
C12 C11 C19 H23 180.0 179.7
C19 C11 C12 H24 179.3 180.0
C11 C19 C13 H25 180.3 179.9
C12 C11 C19 C13 0.7 0.0
C19 C11 C12 H23 180.0 180.3
C11 C12 C20 C17 359.8 360.0
C11 C12 C20 C21 182.5 180.0
C20 C12 C11 H24 180.0 180.0
C13 C19 C11 H23 180.7 180.3
C17 C13 C19 H25 180.0 180.1
C3 C26 C5 C4 241.6 240.0
C4 C26 C5 C22 235.2 240.0
C5 C26 C4 H10 61.4 300.0
C5 C26 C4 H11 181.5 60.0
C5 C26 C4 H12 301.5 180.0
C3 C26 C5 C22 116.8 120.0
C5 C26 C3 H7 297.8 180.0
C5 C26 C3 H8 57.8 300.0
C5 C26 C3 H9 177.8 60.0
H13 C5 C26 H14 240.0 240.0
H13 C5 C26 H15 120.0 120.0
H14 C5 C26 H15 240.0 240.0
C3 C26 C22 C4 120.6 120.0
C4 C26 C22 C5 121.2 120.0
C22 C26 C4 H10 299.4 180.0
C22 C26 C4 H11 59.5 299.9
C22 C26 C4 H12 179.5 60.0
C3 C26 C22 C5 241.8 240.0
C22 C26 C3 H7 56.2 300.0
C22 C26 C3 H8 176.2 60.0
C22 C26 C3 H9 296.2 180.0
C22 C26 C5 H13 304.8 300.0
C22 C26 C5 H14 64.8 60.0
C22 C26 C5 H15 184.8 180.0
C26 C22 C15 H27 1.1 359.7
C26 C22 N29 N32 179.7 180.2
C20 C12 C11 C19 359.3 360.0
C20 C12 C11 H23 179.3 179.7
C11 C12 C20 H24 180.0 180.0
C14 C21 C20 C12 316.9 46.9
C12 C20 C21 N28 133.5 227.0
C11 C19 C13 C17 0.3 360.0
C19 C13 C17 H25 180.0 179.9
C12 C20 C17 C13 1.2 0.0
C13 C17 C2 H4 89.4 95.4
C13 C17 C2 H5 209.4 215.4
C13 C17 C2 H6 329.4 335.4
C4 C26 C22 C15 335.3 315.0
C3 C26 C22 C15 95.9 75.0
C22 C15 C24 N31 178.9 179.7
C22 C15 C24 N32 359.6 359.8
C24 C15 C22 H27 180.0 180.3
N29 C22 C15 C24 359.6 360.0
N29 C22 C15 H27 179.6 179.7
C24 N32 N29 C22 358.6 359.6
C22 C15 C24 H27 180.0 179.7
C15 C24 N32 N29 1.1 0.4
N31 C24 C15 N32 179.3 180.0
C15 C24 N31 C25 26.5 0.0
C15 C24 N31 H30 206.5 180.0
C12 C20 C17 C21 182.9 180.0
C17 C20 C12 H24 179.8 180.0
C20 C17 C13 H25 178.8 180.0
C14 C21 C20 C17 139.8 226.9
C20 C17 C2 H4 270.8 275.4
C20 C17 C2 H5 30.8 35.4
C20 C17 C2 H6 150.8 155.4
C12 C20 C21 C17 177.1 180.0
C21 C20 C12 H24 2.5 0.0
C20 C21 C14 C23 178.8 180.1
C14 C21 C20 N28 183.5 179.9
C20 C21 C14 H26 358.8 359.8
C20 C21 N28 N27 180.9 179.9
H4 C2 C17 H5 240.0 240.0
H4 C2 C17 H6 120.0 120.0
H5 C2 C17 H6 240.0 240.0
O33 C25 N31 H30 178.6 180.0
O33 C25 N30 H29 183.4 180.0
C12 C20 C21 C14 316.9 46.9
C20 C21 C14 N28 177.0 180.1
C21 C14 C23 N30 181.6 180.0
C21 C14 C23 N27 359.1 0.0
C23 C14 C21 H26 180.0 180.3
C14 C21 N28 N27 358.0 0.0
C23 C14 C21 C20 178.8 180.1
C23 C14 C21 N28 1.8 360.0
C21 C14 C23 H26 180.0 179.7
C14 C23 N30 C25 316.3 0.1
N27 C23 C14 N30 177.6 180.1
C14 C23 N30 H29 136.3 180.0
C14 C23 N27 H28 179.6 180.0
C14 C21 N28 C20 177.1 180.1
N28 C21 C14 C23 1.8 360.0
N28 C21 C14 H26 181.8 179.7
C21 N28 N27 H28 181.5 180.0
N31 C24 N32 N29 181.8 180.4
C15 C24 N31 N32 180.8 180.0
N31 C24 C15 H27 358.9 0.0
N30 C25 N31 C24 178.8 179.9
C25 N31 C24 H30 180.0 180.0
C22 N29 N32 C24 358.6 359.6
C15 C24 N32 N31 179.3 180.0
N32 C24 C15 H27 179.6 180.1
N32 C24 N31 C25 205.6 180.0
N32 C24 N31 H30 25.6 359.9
C25 N31 C24 N32 205.6 180.0
C24 N31 C25 H30 180.0 180.0
C23 N30 C25 N31 183.2 180.0
N31 C25 N30 H29 3.2 0.0
C24 N31 C25 N30 178.8 179.9
N30 C25 N31 H30 358.8 360.0
N27 C23 N30 C25 139.1 180.0
C23 N30 C25 H29 180.0 180.0
C14 C23 N30 N27 177.2 180.1
N30 C23 C14 H26 1.6 0.2
C25 N30 C23 H29 180.0 180.0
N30 C23 N27 H28 357.4 0.1
C14 C23 N27 N30 182.2 179.9
N27 C23 C14 H26 179.2 180.3
C21 N28 N27 C23 1.5 0.0
N27 C23 N30 H29 319.0 359.9
N28 N27 C23 H28 180.0 180.0
C15 C24 N32 C18 175.9 180.0
N32 C18 C10 H22 2.9 359.5
N32 C18 C9 H21 358.9 0.4
N28 N27 C23 N30 177.4 180.1
C23 N27 N28 H28 180.0 180.0
C10 C18 C9 H21 181.4 180.1
C18 C10 C8 H20 178.8 180.0
C18 C9 C7 H19 177.3 179.7
C7 C16 C8 C10 359.8 0.5
C16 C8 C10 H20 180.0 179.5
C9 C7 C16 C8 2.1 359.7
C16 C7 C9 H19 180.0 180.3
C10 C8 C16 H20 180.0 180.5
C8 C16 C7 H19 182.2 180.1
C8 C16 C1 H1 89.8 269.9
C8 C16 C1 H2 209.8 30.0
C8 C16 C1 H3 329.8 149.9
C10 C8 C16 C7 359.8 0.5
C9 C7 C16 H19 180.0 179.7
C7 C16 C8 H20 179.8 180.0
C7 C16 C1 H1 270.2 90.0
C7 C16 C1 H2 30.2 210.0
C7 C16 C1 H3 150.2 330.0
H1 C1 C16 H2 240.0 240.0
H1 C1 C16 H3 120.0 120.0
H2 C1 C16 H3 240.0 240.1
C16 C1 H1 H2 120.0 120.0
C16 C1 H1 H3 240.0 240.0
H2 C1 H1 H3 120.0 120.0
C16 C1 H2 H1 240.0 240.0
C16 C1 H2 H3 120.0 120.0
H1 C1 H2 H3 240.0 240.0
C16 C1 H3 H1 120.0 120.0
C16 C1 H3 H2 240.0 240.0
H1 C1 H3 H2 120.0 120.0
C17 C2 H4 H5 120.0 120.0
C17 C2 H4 H6 240.0 240.0
H5 C2 H4 H6 120.0 120.1
C17 C2 H5 H4 239.9 240.0
C17 C2 H5 H6 119.9 120.0
H4 C2 H5 H6 240.0 239.9
C17 C2 H6 H4 120.0 120.0
C17 C2 H6 H5 240.0 240.1
H4 C2 H6 H5 120.0 120.1
H7 C3 C26 C4 180.0 60.0
H7 C3 C26 C5 297.8 180.0
H7 C3 C26 C22 56.2 300.0
C26 C3 H7 H8 120.0 120.0
C26 C3 H7 H9 240.0 240.0
H8 C3 H7 H9 120.1 120.0
H8 C3 C26 C4 300.0 180.0
H8 C3 C26 C5 57.8 300.0
H8 C3 C26 C22 176.2 60.0
C26 C3 H8 H7 240.0 240.0
C26 C3 H8 H9 120.0 120.0
H7 C3 H8 H9 240.0 240.0
H9 C3 C26 C4 60.0 300.0
H9 C3 C26 C5 177.8 60.0
H9 C3 C26 C22 296.2 180.0
C26 C3 H9 H7 120.0 120.0
C26 C3 H9 H8 240.0 240.0
H7 C3 H9 H8 120.0 120.0
H10 C4 C26 C5 61.4 300.0
H10 C4 C26 C22 299.4 180.0
C26 C4 H10 H11 120.0 119.9
C26 C4 H10 H12 240.0 240.0
H11 C4 H10 H12 120.0 120.0
H11 C4 C26 C5 181.5 60.0
H11 C4 C26 C22 59.5 299.9
C26 C4 H11 H10 240.0 240.0
C26 C4 H11 H12 120.0 120.0
H10 C4 H11 H12 240.0 240.0
H12 C4 C26 C5 301.5 180.0
H12 C4 C26 C22 179.5 60.0
C26 C4 H12 H10 120.0 120.0
C26 C4 H12 H11 240.0 240.0
H10 C4 H12 H11 120.0 120.0
C26 C5 H13 H14 120.0 120.0
C26 C5 H13 H15 240.0 240.0
H14 C5 H13 H15 120.0 120.0
C26 C5 H14 H13 240.0 240.0
C26 C5 H14 H15 120.0 120.0
H13 C5 H14 H15 240.0 240.0
C26 C5 H15 H13 120.0 120.0
C26 C5 H15 H14 240.0 240.0
H13 C5 H15 H14 120.0 120.0
O34 C6 H16 H17 120.0 120.0
O34 C6 H16 H18 240.0 240.1
H17 C6 H16 H18 120.0 120.1
O34 C6 H17 H16 240.0 240.0
O34 C6 H17 H18 120.0 120.0
H16 C6 H17 H18 240.0 240.0
O34 C6 H18 H16 120.0 119.9
O34 C6 H18 H17 240.0 240.0
H16 C6 H18 H17 120.0 120.0
C9 C7 H19 C16 180.0 180.3
H19 C7 C16 C8 182.2 180.1
C10 C8 H20 C16 180.0 179.5
H21 C9 C7 C16 177.3 179.9
H21 C9 C7 H19 357.2 359.6
H22 C10 C8 C16 178.8 180.0
H22 C10 C8 H20 358.8 0.4
C12 C11 H23 C19 180.0 180.3
H23 C11 C19 C13 180.7 180.3
H23 C11 C12 C20 179.3 179.7
H23 C11 C12 H24 359.3 359.7
H24 C12 C11 C19 179.3 180.0
C11 C12 H24 C20 180.0 180.0
H24 C12 C11 H23 359.3 359.7
H24 C12 C20 C17 179.8 180.0
H24 C12 C20 C21 2.5 0.0
H26 C14 C21 C20 358.8 359.8
C21 C14 H26 C23 180.0 180.3
H26 C14 C21 N28 181.8 179.7
H26 C14 C23 N30 1.6 0.2
H26 C14 C23 N27 179.2 180.3
C22 C15 H27 C24 180.0 180.3
H27 C15 C24 N31 358.9 0.0
H27 C15 C24 N32 179.6 180.1
H28 N27 C23 N30 357.4 0.1
H29 N30 C25 N31 3.2 0.0
C23 N30 H29 C25 180.0 180.0
H30 N31 C24 N32 25.6 359.9
C24 N31 H30 C25 180.0 180.0