PDB Chemical Component 0VP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0VP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C28 C26 1.524 1.530
C29 C25 1.559 1.530
C26 C24 1.597 1.530
C25 C24 1.595 1.530
C24 C16 1.555 1.507
C24 O2 1.440 1.430
C13 C16 1.532 1.383
C13 C9 1.441 1.380
C16 C12 1.484 1.383
C9 C7 1.467 1.393
C12 C11 1.423 1.380
C7 C11 1.556 1.394
C7 C18 1.431 1.484
C11 C15 1.565 1.506
C17 C18 1.486 1.392
C17 C14 1.496 1.386
C18 C19 1.504 1.393
C27 C8 1.513 1.530
O1 C14 1.388 1.359
O1 C10 1.551 1.430
C6 C1 1.380 1.382
C6 C5 1.491 1.382
C14 C21 1.446 1.388
C1 C2 1.426 1.382
C15 C22 1.516 1.530
C19 C8 1.612 1.507
C19 C20 1.466 1.380
C5 C4 1.483 1.382
C5 C10 1.621 1.507
O53 C52 1.453 1.430
C2 C52 1.526 1.507
C2 C3 1.542 1.382
C4 C3 1.506 1.382
C21 C20 1.444 1.383
C3 C48 1.511 1.507
C22 C23 1.522 1.530
C48 O49 1.448 1.429
O2 H1 0.949 0.967
C9 H2 1.080 1.079
C10 H3 1.099 1.089
C10 H4 1.100 1.090
C12 H5 1.080 1.080
C13 H6 1.080 1.080
C15 H7 1.100 1.090
C15 H8 1.100 1.090
C17 H9 1.080 1.080
C20 H10 1.080 1.081
C21 H11 1.080 1.080
C22 H12 1.100 1.090
C22 H13 1.100 1.089
C23 H14 1.100 1.091
C23 H15 1.100 1.090
C23 H16 1.101 1.090
C25 H17 1.100 1.090
C25 H18 1.100 1.090
C26 H19 1.100 1.090
C26 H20 1.100 1.090
C27 H21 1.100 1.090
C27 H22 1.100 1.090
C27 H23 1.101 1.090
C28 H24 1.100 1.091
C28 H25 1.100 1.090
C28 H26 1.101 1.089
C29 H27 1.100 1.089
C29 H28 1.100 1.090
C29 H29 1.100 1.090
C1 H30 1.080 1.080
C4 H31 1.080 1.080
C6 H32 1.080 1.081
C48 H33 1.101 1.090
C48 H34 1.100 1.090
O49 H35 0.950 0.967
C52 H36 1.100 1.090
C52 H37 1.100 1.090
O53 H38 0.951 0.966
C8 H39 1.100 1.090
C8 H40 1.100 1.090

Bond Angles for 0VP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C28 C26 H19 107.7 109.5
C28 C26 H20 107.7 109.5
C29 C25 H17 107.4 109.5
C29 C25 H18 107.4 109.5
C24 O2 H1 109.5 114.0
C16 C13 H6 119.6 120.0
C13 C9 C7 120.4 119.9
C13 C9 H2 119.8 120.1
C16 C12 H5 118.2 119.9
C9 C7 C11 120.2 119.8
C9 C7 C18 120.0 120.1
C7 C9 H2 119.8 120.0
C12 C11 C15 115.8 120.1
C11 C15 C22 111.3 109.4
C11 C15 H7 109.0 109.5
C11 C15 H8 109.0 109.5
C17 C18 C19 119.7 119.9
C18 C17 H9 120.8 120.1
C17 C14 C21 120.7 120.0
C18 C19 C8 122.1 120.0
C18 C19 C20 118.9 120.0
C19 C8 C27 115.7 109.5
C8 C27 H21 109.5 109.4
C8 C27 H22 109.5 109.5
C8 C27 H23 109.4 109.5
C27 C8 H39 107.9 109.5
C27 C8 H40 107.9 109.5
C10 O1 C14 123.2 117.0
O1 C14 C21 126.0 120.0
O1 C10 H3 112.0 109.5
O1 C10 H4 112.0 109.5
C6 C1 H30 119.0 120.0
C14 C21 C20 120.9 120.2
C14 C21 H11 119.5 119.9
C1 C2 C52 115.2 120.0
C1 C2 C3 119.1 120.0
C2 C1 H30 119.0 120.1
C15 C22 C23 108.6 109.5
C22 C15 H7 109.0 109.5
C22 C15 H8 109.0 109.5
C15 C22 H12 109.7 109.5
C15 C22 H13 109.7 109.5
C20 C19 C8 119.0 120.0
C19 C8 H39 107.9 109.5
C19 C8 H40 107.9 109.5
C19 C20 H10 119.4 119.9
C5 C4 H31 120.5 120.0
C5 C10 H3 111.9 109.5
C5 C10 H4 111.9 109.4
O53 C52 H36 108.6 109.4
O53 C52 H37 108.7 109.5
C3 C2 C52 125.7 120.0
C2 C52 H36 108.7 109.5
C2 C52 H37 108.7 109.5
C2 C3 C48 122.5 120.0
C4 C3 C48 119.0 120.0
C21 C20 H10 119.4 119.9
C3 C48 O49 110.9 109.5
C3 C48 H33 109.1 109.4
C3 C48 H34 109.1 109.5
C23 C22 H12 109.7 109.5
C23 C22 H13 109.7 109.4
C22 C23 H14 109.5 109.4
C22 C23 H15 109.5 109.5
C22 C23 H16 109.5 109.5
O49 C48 H33 109.1 109.5
O49 C48 H34 109.1 109.5
C48 O49 H35 109.5 114.0
H3 C10 H4 109.4 109.5
H7 C15 H8 109.5 109.4
H12 C22 H13 109.5 109.5
H14 C23 H15 109.5 109.4
H14 C23 H16 109.5 109.5
H15 C23 H16 109.5 109.5
H17 C25 H18 109.5 109.5
H19 C26 H20 109.5 109.4
H21 C27 H22 109.5 109.5
H21 C27 H23 109.5 109.4
H22 C27 H23 109.5 109.5
H24 C28 H25 109.5 109.4
H24 C28 H26 109.5 109.5
H25 C28 H26 109.5 109.5
H27 C29 H28 109.5 109.5
H27 C29 H29 109.4 109.5
H28 C29 H29 109.5 109.5
H33 C48 H34 109.5 109.5
H36 C52 H37 109.5 109.5
H39 C8 H40 109.5 109.4

Torsion Angles for 0VP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H19 C26 C28 H20 241.9 120.0
H17 C25 C29 H18 242.3 120.0
C26 C24 O2 H1 180.0 300.0
C25 C24 O2 H1 59.4 180.0
C16 C24 O2 H1 296.3 59.9
C24 C16 C13 H6 359.5 0.0
C24 C16 C12 H5 0.4 0.3
C16 C13 C9 C7 0.0 359.9
C16 C13 C9 H2 180.0 179.7
C13 C16 C12 H5 180.3 180.3
C13 C9 C7 C11 0.6 359.8
C13 C9 C7 C18 181.4 179.7
C7 C9 C13 H2 180.0 180.2
C13 C9 C7 H2 180.0 179.8
C9 C7 C11 C12 359.2 0.6
C12 C11 C15 C22 258.2 264.5
C12 C11 C15 H7 18.5 24.5
C12 C11 C15 H8 137.9 144.4
C9 C7 C11 C18 180.7 180.0
C11 C7 C9 H2 180.6 180.0
C7 C11 C15 H7 198.3 205.1
C7 C11 C15 H8 317.8 325.1
C9 C7 C18 C11 179.3 180.0
C18 C7 C9 H2 1.3 359.9
C7 C18 C17 H9 0.6 359.9
C9 C7 C11 C15 179.4 180.0
C11 C15 C22 C23 180.6 180.0
C22 C15 C11 H7 239.7 240.0
C22 C15 C11 H8 120.3 120.0
C11 C15 C22 H12 300.4 300.0
C11 C15 C22 H13 60.7 60.0
H7 C15 C11 H8 240.6 240.0
C9 C7 C18 C17 264.6 69.9
C18 C17 C14 C21 359.7 0.2
C17 C18 C19 C8 180.8 180.0
C17 C18 C19 C20 0.3 359.9
O1 C14 C17 C21 178.9 179.8
C17 C14 C21 C20 0.3 359.5
C17 C14 C21 H11 180.3 179.7
C9 C7 C18 C19 85.1 249.8
C19 C18 C17 H9 180.0 180.0
C18 C19 C8 C27 279.9 86.1
C20 C19 C18 C8 179.5 180.0
C18 C19 C8 H39 159.0 206.1
C18 C19 C8 H40 40.8 326.0
C18 C19 C20 H10 179.7 180.0
C20 C19 C8 C27 100.5 266.1
C19 C8 C27 H39 239.1 120.0
C19 C8 C27 H40 120.9 240.0
H21 C27 C8 H22 240.0 240.0
H21 C27 C8 H23 120.0 120.0
H22 C27 C8 H23 240.0 240.0
H39 C8 C27 H40 241.8 120.0
C17 C14 O1 C21 181.1 180.2
C14 O1 C10 H3 295.4 300.0
C14 O1 C10 H4 58.8 60.0
O1 C14 C21 C20 181.5 179.7
O1 C14 C21 H11 1.5 360.0
C10 O1 C14 C21 41.9 0.0
C5 C10 O1 H3 241.7 240.0
C5 C10 O1 H4 118.3 119.9
H3 C10 O1 H4 236.6 240.0
C6 C1 C2 C52 180.2 180.3
C2 C1 C6 H30 180.0 179.7
C5 C6 C1 H30 180.0 179.8
C6 C5 C4 H31 180.4 179.8
C6 C5 C10 H3 168.8 150.3
C6 C5 C10 H4 45.4 30.2
C14 C21 C20 H10 180.0 180.3
C6 C1 C2 H30 180.0 180.3
C3 C2 C1 C52 179.8 180.1
C1 C2 C52 H36 239.5 120.0
C1 C2 C52 H37 120.4 240.0
C1 C2 C3 C48 179.8 180.0
C11 C15 C22 H7 120.3 120.0
C11 C15 C22 H8 239.7 239.9
C23 C22 C15 H12 240.1 240.0
C23 C22 C15 H13 119.9 119.9
C15 C22 C23 H14 180.0 60.0
C15 C22 C23 H15 300.0 180.0
C15 C22 C23 H16 60.0 300.0
H7 C15 C22 H8 119.5 120.0
H12 C22 C15 H13 239.7 240.0
C18 C19 C8 C20 179.5 180.0
C19 C8 C27 H21 180.0 180.0
C19 C8 C27 H22 300.0 300.0
C19 C8 C27 H23 60.0 60.0
C27 C8 C19 H39 120.9 240.0
C27 C8 C19 H40 239.1 120.0
C8 C19 C20 H10 359.2 360.0
H39 C8 C19 H40 118.2 240.0
C18 C19 C20 C8 180.5 180.0
C14 C21 C20 C19 360.0 0.5
C20 C19 C8 H39 339.6 26.1
C20 C19 C8 H40 221.3 146.0
C21 C20 C19 H10 180.0 179.8
C4 C5 C10 H3 40.0 330.1
C4 C5 C10 H4 276.7 210.0
C5 C4 C3 C48 179.9 180.0
O1 C10 C5 H3 118.3 120.0
O1 C10 C5 H4 241.6 240.0
H3 C10 C5 H4 123.3 120.0
C2 C52 O53 H36 239.5 119.9
C2 C52 O53 H37 120.5 240.0
H36 C52 O53 H37 241.0 120.0
C1 C2 C52 C3 179.8 180.1
C52 C2 C1 H30 0.2 360.0
O53 C52 C2 H36 120.5 240.1
O53 C52 C2 H37 239.5 120.0
C52 C2 C3 C48 359.7 0.1
H36 C52 C2 H37 119.0 239.9
C1 C2 C3 C52 180.2 179.9
C3 C2 C1 H30 180.1 180.0
C3 C2 C52 H36 59.7 299.9
C3 C2 C52 H37 300.6 60.0
C4 C3 C2 C48 180.2 179.9
C2 C3 C48 O49 275.2 180.0
C2 C3 C48 H33 35.4 300.0
C2 C3 C48 H34 155.0 60.0
C4 C3 C2 C52 179.9 180.0
C2 C3 C4 C48 179.8 180.1
C4 C3 C48 O49 95.0 0.1
C4 C3 C48 H33 215.2 120.0
C4 C3 C48 H34 334.8 240.0
C14 C21 C20 H11 180.0 180.2
C21 C20 C19 C8 179.2 179.8
C19 C20 C21 H10 180.0 180.2
C48 C3 C2 C52 359.7 0.1
O49 C48 C3 H33 239.8 240.0
O49 C48 C3 H34 120.2 120.0
C3 C48 O49 H35 180.0 180.0
H33 C48 C3 H34 240.4 240.0
C23 C22 C15 H7 60.3 60.0
C23 C22 C15 H8 300.8 300.0
C15 C22 C23 H12 119.9 120.0
C15 C22 C23 H13 240.1 240.0
H12 C22 C23 H13 120.3 120.0
H14 C23 C22 H15 240.0 240.0
H14 C23 C22 H16 120.0 120.0
H15 C23 C22 H16 240.0 240.0
C3 C48 O49 H33 120.2 119.9
C3 C48 O49 H34 239.8 240.0
H33 C48 O49 H34 119.6 120.0
C13 C9 H2 C7 180.0 180.2
H2 C9 C7 C11 180.6 180.0
H2 C9 C7 C18 1.3 359.9
H3 C10 O1 C14 295.4 300.0
O1 C10 H3 H4 124.8 120.0
C5 C10 H3 H4 235.3 240.0
H4 C10 O1 C14 58.8 60.0
O1 C10 H4 H3 235.2 240.0
C5 C10 H4 H3 124.7 120.0
H5 C12 C11 C15 0.1 0.0
H6 C13 C9 C7 180.0 180.0
H6 C13 C9 H2 0.0 359.8
C11 C15 H7 C22 238.3 240.0
C11 C15 H7 H8 119.1 120.0
H7 C15 C22 C23 60.3 60.0
C22 C15 H7 H8 240.8 240.0
H7 C15 C22 H12 180.2 180.0
H7 C15 C22 H13 300.4 300.0
C11 C15 H8 C22 121.7 120.0
C11 C15 H8 H7 240.9 240.0
H8 C15 C22 C23 300.8 300.0
C22 C15 H8 H7 119.2 120.0
H8 C15 C22 H12 60.7 60.0
H8 C15 C22 H13 181.0 180.1
H9 C17 C18 C19 180.0 180.0
H9 C17 C14 C21 179.7 180.3
H10 C20 C19 C8 359.2 360.0
C14 C21 H11 C20 180.0 179.8
H11 C21 C20 H10 360.0 0.1
C15 C22 H12 C23 240.8 240.0
H12 C22 C15 H7 180.2 180.0
H12 C22 C15 H8 60.7 60.0
C15 C22 H12 H13 120.4 120.1
C23 C22 H12 H13 239.6 240.1
H12 C22 C23 H14 60.2 300.0
H12 C22 C23 H15 180.2 60.0
H12 C22 C23 H16 300.2 180.0
C15 C22 H13 C23 119.2 120.0
H13 C22 C15 H7 300.4 300.0
H13 C22 C15 H8 181.0 180.1
C15 C22 H13 H12 239.6 240.0
C23 C22 H13 H12 120.4 120.0
H13 C22 C23 H14 299.9 180.0
H13 C22 C23 H15 59.9 300.0
H13 C22 C23 H16 179.9 60.0
H14 C23 C22 H12 60.2 300.0
H14 C23 C22 H13 299.9 180.0
C22 C23 H14 H15 120.0 120.0
C22 C23 H14 H16 240.0 240.0
H15 C23 H14 H16 120.0 120.0
H15 C23 C22 H12 180.2 60.0
H15 C23 C22 H13 59.9 300.0
C22 C23 H15 H14 240.0 240.0
C22 C23 H15 H16 120.0 120.0
H14 C23 H15 H16 240.0 240.0
H16 C23 C22 H12 300.2 180.0
H16 C23 C22 H13 179.9 60.0
C22 C23 H16 H14 120.0 120.0
C22 C23 H16 H15 240.0 240.0
H14 C23 H16 H15 120.0 120.0
C29 C25 H17 H18 116.4 240.0
C29 C25 H18 H17 243.6 120.0
C28 C26 H19 H20 116.9 240.0
C28 C26 H20 H19 243.1 120.0
C8 C27 H21 H22 120.0 120.0
C8 C27 H21 H23 240.0 240.0
H21 C27 C8 H39 300.9 60.0
H21 C27 C8 H40 59.1 300.0
H22 C27 H21 H23 120.0 120.0
C8 C27 H22 H21 240.0 240.0
C8 C27 H22 H23 120.0 120.0
H22 C27 C8 H39 60.9 180.0
H22 C27 C8 H40 179.1 60.0
H21 C27 H22 H23 240.0 240.0
C8 C27 H23 H21 120.0 120.0
C8 C27 H23 H22 240.0 240.0
H23 C27 C8 H39 180.9 300.0
H23 C27 C8 H40 299.1 180.0
H21 C27 H23 H22 120.0 120.0
H24 C28 C26 H19 301.0 183.0
H24 C28 C26 H20 59.0 63.1
H25 C28 H24 H26 120.0 120.0
H25 C28 C26 H19 61.0 303.0
H25 C28 C26 H20 179.0 183.0
H24 C28 H25 H26 240.0 240.0
H26 C28 C26 H19 181.0 63.0
H26 C28 C26 H20 299.0 303.1
H24 C28 H26 H25 120.0 120.0
H27 C29 C25 H17 301.2 184.5
H27 C29 C25 H18 58.9 64.5
H28 C29 H27 H29 120.0 120.1
H28 C29 C25 H17 61.2 304.5
H28 C29 C25 H18 178.9 184.5
H27 C29 H28 H29 240.1 239.9
H29 C29 C25 H17 181.2 64.5
H29 C29 C25 H18 298.9 304.5
H27 C29 H29 H28 120.0 120.1
H30 C1 C2 C52 0.2 360.0
H30 C1 C2 C3 180.1 180.0
H31 C4 C3 C48 359.9 359.9
H32 C6 C1 H30 0.0 0.3
C3 C48 H33 O49 238.7 240.0
C3 C48 H33 H34 119.3 120.0
O49 C48 H33 H34 240.7 240.0
H33 C48 O49 H35 59.8 60.0
C3 C48 H34 O49 121.3 120.0
C3 C48 H34 H33 240.7 240.1
O49 C48 H34 H33 119.3 120.0
H34 C48 O49 H35 300.2 300.0
H35 O49 C48 H33 59.8 60.0
H35 O49 C48 H34 300.2 300.0
O53 C52 H36 H37 118.5 240.0
C2 C52 H36 H37 241.5 120.1
O53 C52 H37 H36 241.5 120.0
C2 C52 H37 H36 118.5 240.0
H38 O53 C52 H36 300.5 60.0
H38 O53 C52 H37 59.5 300.0
C19 C8 H39 C27 125.6 240.0
H39 C8 C27 H21 300.9 60.0
H39 C8 C27 H22 60.9 180.0
H39 C8 C27 H23 180.9 300.0
C27 C8 H39 H40 117.2 240.0
C19 C8 H39 H40 242.8 120.0
C19 C8 H40 C27 234.4 120.0
H40 C8 C27 H21 59.1 300.0
H40 C8 C27 H22 179.1 60.0
H40 C8 C27 H23 299.1 180.0
C27 C8 H40 H39 242.8 120.0
C19 C8 H40 H39 117.2 240.0