PDB Chemical Component 0VN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0VN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N2 |
C7 |
1.146 |
1.136 |
| C7 |
C4 |
1.401 |
1.432 |
| C3 |
C18 |
1.574 |
1.530 |
| C5 |
C4 |
1.487 |
1.396 |
| C5 |
C6 |
1.469 |
1.382 |
| C1 |
C18 |
1.589 |
1.530 |
| C4 |
C10 |
1.488 |
1.402 |
| C18 |
C12 |
1.568 |
1.507 |
| C18 |
C2 |
1.538 |
1.529 |
| C13 |
C12 |
1.490 |
1.383 |
| C13 |
C14 |
1.418 |
1.382 |
| C6 |
N3 |
1.371 |
1.386 |
| C6 |
C8 |
1.513 |
1.407 |
| N3 |
C11 |
1.345 |
1.365 |
| C12 |
C17 |
1.500 |
1.384 |
| C10 |
C9 |
1.463 |
1.362 |
| C14 |
C15 |
1.462 |
1.389 |
| C17 |
C16 |
1.441 |
1.381 |
| C8 |
C9 |
1.483 |
1.400 |
| C8 |
N4 |
1.384 |
1.356 |
| C15 |
C16 |
1.466 |
1.389 |
| C15 |
N1 |
1.341 |
1.399 |
| C11 |
N1 |
1.451 |
1.379 |
| C11 |
N4 |
1.329 |
1.311 |
| C5 |
H1 |
1.080 |
1.080 |
| C9 |
H2 |
1.080 |
1.080 |
| C10 |
H3 |
1.081 |
1.080 |
| N3 |
H4 |
1.000 |
0.970 |
| N1 |
H6 |
1.000 |
0.969 |
| C13 |
H7 |
1.080 |
1.080 |
| C14 |
H8 |
1.080 |
1.080 |
| C16 |
H9 |
1.080 |
1.080 |
| C17 |
H10 |
1.080 |
1.080 |
| C1 |
H11 |
1.100 |
1.089 |
| C1 |
H12 |
1.100 |
1.090 |
| C1 |
H13 |
1.100 |
1.090 |
| C2 |
H14 |
1.100 |
1.090 |
| C2 |
H15 |
1.100 |
1.090 |
| C2 |
H16 |
1.100 |
1.091 |
| C3 |
H17 |
1.100 |
1.090 |
| C3 |
H18 |
1.100 |
1.090 |
| C3 |
H19 |
1.100 |
1.090 |
Bond Angles for 0VN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C4 |
C10 |
126.5 |
120.1 |
| C5 |
C6 |
N3 |
133.7 |
133.8 |
| C5 |
C6 |
C8 |
119.7 |
120.0 |
| C6 |
C5 |
H1 |
122.4 |
120.2 |
| C1 |
C18 |
C2 |
110.0 |
109.5 |
| C4 |
C10 |
C9 |
117.3 |
120.5 |
| C4 |
C10 |
H3 |
121.3 |
119.8 |
| C18 |
C2 |
H14 |
109.5 |
109.4 |
| C18 |
C2 |
H15 |
109.5 |
109.5 |
| C18 |
C2 |
H16 |
109.5 |
109.5 |
| C13 |
C12 |
C17 |
124.6 |
120.1 |
| C13 |
C14 |
C15 |
115.7 |
119.9 |
| C14 |
C13 |
H7 |
120.9 |
119.9 |
| C13 |
C14 |
H8 |
122.1 |
120.0 |
| C8 |
C6 |
N3 |
106.6 |
106.2 |
| C6 |
N3 |
C11 |
105.2 |
107.2 |
| C6 |
N3 |
H4 |
127.4 |
126.4 |
| C6 |
C8 |
C9 |
122.9 |
119.7 |
| C6 |
C8 |
N4 |
105.7 |
107.0 |
| N3 |
C11 |
N1 |
122.7 |
125.1 |
| N3 |
C11 |
N4 |
116.9 |
109.9 |
| C11 |
N3 |
H4 |
127.4 |
126.4 |
| C12 |
C17 |
C16 |
117.0 |
120.1 |
| C12 |
C17 |
H10 |
121.5 |
119.9 |
| C10 |
C9 |
H2 |
120.8 |
120.0 |
| C14 |
C15 |
C16 |
128.9 |
119.9 |
| C15 |
C14 |
H8 |
122.2 |
120.1 |
| C17 |
C16 |
H9 |
122.2 |
120.0 |
| C9 |
C8 |
N4 |
131.4 |
133.2 |
| C8 |
C9 |
H2 |
120.8 |
120.0 |
| C8 |
N4 |
C11 |
105.6 |
109.7 |
| C15 |
C16 |
H9 |
122.2 |
120.0 |
| C15 |
N1 |
H6 |
115.4 |
120.0 |
| N4 |
C11 |
N1 |
120.4 |
125.0 |
| C11 |
N1 |
H6 |
115.4 |
120.0 |
| H11 |
C1 |
H12 |
109.5 |
109.5 |
| H11 |
C1 |
H13 |
109.5 |
109.4 |
| H12 |
C1 |
H13 |
109.5 |
109.5 |
| H14 |
C2 |
H15 |
109.5 |
109.5 |
| H14 |
C2 |
H16 |
109.5 |
109.4 |
| H15 |
C2 |
H16 |
109.4 |
109.4 |
| H17 |
C3 |
H18 |
109.5 |
109.4 |
| H17 |
C3 |
H19 |
109.5 |
109.5 |
| H18 |
C3 |
H19 |
109.4 |
109.5 |
Torsion Angles for 0VN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C4 |
C10 |
H3 |
1.8 |
0.2 |
| C3 |
C18 |
C2 |
H14 |
180.0 |
300.0 |
| C3 |
C18 |
C2 |
H15 |
300.0 |
60.0 |
| C3 |
C18 |
C2 |
H16 |
60.0 |
180.0 |
| C5 |
C4 |
C10 |
C9 |
0.3 |
0.0 |
| C5 |
C4 |
C10 |
H3 |
180.2 |
180.0 |
| C6 |
C5 |
C4 |
C10 |
359.8 |
360.0 |
| C8 |
C6 |
C5 |
N3 |
180.2 |
179.9 |
| C5 |
C6 |
N3 |
C11 |
180.3 |
180.0 |
| C5 |
C6 |
N3 |
H4 |
0.3 |
360.0 |
| C5 |
C6 |
C8 |
C9 |
0.3 |
0.0 |
| C5 |
C6 |
C8 |
N4 |
179.8 |
180.0 |
| C1 |
C18 |
C2 |
H14 |
291.7 |
180.0 |
| C1 |
C18 |
C2 |
H15 |
51.7 |
300.0 |
| C1 |
C18 |
C2 |
H16 |
171.6 |
60.0 |
| C4 |
C10 |
C9 |
H2 |
180.0 |
180.0 |
| C18 |
C12 |
C17 |
H10 |
1.2 |
0.2 |
| H14 |
C2 |
C18 |
H15 |
240.0 |
240.0 |
| H14 |
C2 |
C18 |
H16 |
120.0 |
120.0 |
| H15 |
C2 |
C18 |
H16 |
240.1 |
240.0 |
| C13 |
C12 |
C17 |
C16 |
0.4 |
0.0 |
| C13 |
C12 |
C17 |
H10 |
180.4 |
180.0 |
| C14 |
C13 |
C12 |
C17 |
359.7 |
360.0 |
| C13 |
C14 |
C15 |
C16 |
0.3 |
0.0 |
| C15 |
C14 |
C13 |
H8 |
180.0 |
180.0 |
| C5 |
C6 |
N3 |
C8 |
180.2 |
180.0 |
| N3 |
C6 |
C5 |
H1 |
359.7 |
0.0 |
| N3 |
C6 |
C8 |
C9 |
180.4 |
180.0 |
| N3 |
C6 |
C8 |
N4 |
0.0 |
360.0 |
| C6 |
N3 |
C11 |
N1 |
178.3 |
180.0 |
| C6 |
N3 |
C11 |
N4 |
359.8 |
0.0 |
| C11 |
N3 |
C6 |
H4 |
180.0 |
180.0 |
| C5 |
C6 |
C8 |
N3 |
179.8 |
180.0 |
| C8 |
C6 |
C5 |
H1 |
180.0 |
180.0 |
| C8 |
C6 |
N3 |
C11 |
0.1 |
0.0 |
| C8 |
C6 |
N3 |
H4 |
180.1 |
180.0 |
| C9 |
C8 |
C6 |
N4 |
180.4 |
180.0 |
| C6 |
C8 |
C9 |
H2 |
179.8 |
180.0 |
| C6 |
C8 |
N4 |
C11 |
359.9 |
0.0 |
| C6 |
N3 |
C11 |
H4 |
180.0 |
180.0 |
| C8 |
N4 |
C11 |
N3 |
0.2 |
360.0 |
| N4 |
C11 |
N3 |
N1 |
181.5 |
180.0 |
| N3 |
C11 |
N1 |
H6 |
182.1 |
5.4 |
| C12 |
C17 |
C16 |
H9 |
179.8 |
179.9 |
| C4 |
C10 |
C9 |
H3 |
180.0 |
179.9 |
| C10 |
C9 |
C8 |
N4 |
180.3 |
180.0 |
| C8 |
C9 |
C10 |
H2 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
H7 |
179.9 |
180.1 |
| C13 |
C14 |
C15 |
H8 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
H9 |
179.8 |
180.1 |
| C14 |
C15 |
N1 |
H6 |
220.0 |
209.9 |
| C12 |
C17 |
C16 |
H10 |
180.0 |
179.9 |
| C15 |
C16 |
C17 |
H9 |
180.0 |
180.1 |
| C4 |
C10 |
C9 |
C8 |
360.0 |
360.0 |
| C9 |
C8 |
C6 |
N3 |
180.4 |
180.0 |
| C6 |
C8 |
C9 |
N4 |
179.5 |
180.0 |
| C10 |
C9 |
C8 |
H2 |
180.0 |
180.0 |
| C9 |
C8 |
N4 |
C11 |
179.4 |
180.0 |
| N4 |
C8 |
C6 |
N3 |
0.0 |
360.0 |
| C6 |
C8 |
N4 |
C9 |
180.5 |
180.0 |
| N3 |
C11 |
N4 |
C8 |
0.2 |
360.0 |
| N4 |
C8 |
C9 |
H2 |
0.3 |
0.0 |
| C8 |
N4 |
C11 |
N1 |
181.7 |
180.0 |
| C12 |
C17 |
C16 |
C15 |
359.8 |
360.0 |
| C16 |
C15 |
C14 |
H8 |
180.3 |
180.1 |
| C17 |
C16 |
C15 |
H9 |
180.0 |
179.9 |
| C16 |
C15 |
N1 |
H6 |
40.0 |
29.9 |
| C11 |
N1 |
C15 |
H6 |
180.0 |
180.0 |
| N3 |
C11 |
N1 |
N4 |
181.5 |
180.0 |
| N1 |
C11 |
N3 |
H4 |
358.3 |
360.0 |
| C15 |
N1 |
C11 |
H6 |
180.0 |
180.0 |
| N3 |
C11 |
N4 |
N1 |
178.6 |
180.0 |
| N4 |
C11 |
N3 |
H4 |
179.8 |
180.0 |
| N4 |
C11 |
N1 |
H6 |
0.6 |
185.3 |
| H1 |
C5 |
C4 |
C10 |
179.8 |
180.0 |
| H1 |
C5 |
C6 |
N3 |
359.7 |
0.0 |
| H1 |
C5 |
C6 |
C8 |
180.0 |
180.0 |
| H2 |
C9 |
C8 |
N4 |
0.3 |
0.0 |
| C4 |
C10 |
H3 |
C9 |
180.0 |
180.1 |
| H3 |
C10 |
C9 |
H2 |
360.0 |
0.0 |
| C6 |
N3 |
H4 |
C11 |
180.0 |
180.0 |
| H4 |
N3 |
C11 |
N1 |
358.3 |
360.0 |
| H4 |
N3 |
C11 |
N4 |
179.8 |
180.0 |
| H7 |
C13 |
C12 |
C17 |
179.7 |
179.9 |
| H7 |
C13 |
C14 |
C15 |
179.9 |
180.1 |
| H7 |
C13 |
C14 |
H8 |
359.9 |
0.0 |
| C13 |
C14 |
H8 |
C15 |
180.0 |
180.0 |
| H8 |
C14 |
C13 |
H7 |
359.9 |
0.0 |
| H8 |
C14 |
C15 |
C16 |
180.3 |
180.1 |
| C12 |
C17 |
H10 |
C16 |
180.0 |
180.1 |
| H10 |
C17 |
C16 |
H9 |
359.8 |
360.0 |
| H11 |
C1 |
C18 |
C2 |
65.5 |
300.0 |
| H12 |
C1 |
H11 |
H13 |
120.0 |
120.0 |
| H12 |
C1 |
C18 |
C2 |
185.6 |
60.0 |
| H11 |
C1 |
H12 |
H13 |
240.0 |
240.0 |
| H13 |
C1 |
C18 |
C2 |
305.5 |
180.0 |
| H11 |
C1 |
H13 |
H12 |
120.0 |
120.0 |
| C18 |
C2 |
H14 |
H15 |
120.1 |
120.0 |
| C18 |
C2 |
H14 |
H16 |
240.0 |
240.0 |
| H15 |
C2 |
H14 |
H16 |
119.9 |
120.0 |
| C18 |
C2 |
H15 |
H14 |
239.9 |
240.0 |
| C18 |
C2 |
H15 |
H16 |
120.0 |
120.0 |
| H14 |
C2 |
H15 |
H16 |
240.0 |
240.0 |
| C18 |
C2 |
H16 |
H14 |
120.1 |
120.0 |
| C18 |
C2 |
H16 |
H15 |
240.0 |
240.0 |
| H14 |
C2 |
H16 |
H15 |
120.0 |
120.0 |
| H18 |
C3 |
H17 |
H19 |
120.0 |
120.0 |
| H17 |
C3 |
H18 |
H19 |
240.0 |
240.0 |
| H17 |
C3 |
H19 |
H18 |
120.0 |
120.0 |