PDB Chemical Component 0VF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0VF
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C26 |
C22 |
1.560 |
1.543 |
| C26 |
C21 |
1.548 |
1.543 |
| O24 |
C10 |
1.217 |
1.216 |
| C22 |
N13 |
1.463 |
1.465 |
| C22 |
C17 |
1.544 |
1.543 |
| C28 |
C29 |
1.379 |
1.378 |
| C28 |
C18 |
1.403 |
1.395 |
| C10 |
N13 |
1.349 |
1.347 |
| C10 |
C18 |
1.478 |
1.480 |
| C29 |
C20 |
1.400 |
1.397 |
| C18 |
C27 |
1.400 |
1.397 |
| C21 |
N7 |
1.472 |
1.487 |
| C17 |
N7 |
1.459 |
1.486 |
| N7 |
C1 |
1.377 |
1.385 |
| O25 |
C14 |
1.215 |
1.215 |
| C20 |
C14 |
1.481 |
1.479 |
| C20 |
C30 |
1.402 |
1.396 |
| C36 |
O34 |
1.429 |
1.429 |
| C27 |
C30 |
1.382 |
1.378 |
| C14 |
O32 |
1.344 |
1.347 |
| C1 |
N3 |
1.324 |
1.321 |
| C1 |
N2 |
1.334 |
1.327 |
| N3 |
C5 |
1.305 |
1.335 |
| O34 |
C16 |
1.369 |
1.359 |
| N2 |
C4 |
1.325 |
1.323 |
| C16 |
C15 |
1.402 |
1.385 |
| C16 |
C23 |
1.399 |
1.392 |
| C15 |
C19 |
1.400 |
1.389 |
| C5 |
C6 |
1.420 |
1.397 |
| C5 |
S9 |
1.765 |
1.761 |
| C4 |
C6 |
1.431 |
1.420 |
| C4 |
N11 |
1.394 |
1.384 |
| O35 |
C23 |
1.371 |
1.361 |
| O35 |
C37 |
1.432 |
1.429 |
| C23 |
C31 |
1.391 |
1.385 |
| C6 |
N8 |
1.348 |
1.345 |
| C19 |
N11 |
1.411 |
1.400 |
| C19 |
C33 |
1.394 |
1.388 |
| S9 |
C12 |
1.791 |
1.758 |
| C31 |
C33 |
1.386 |
1.382 |
| N8 |
C12 |
1.309 |
1.281 |
| N11 |
H1 |
1.000 |
0.970 |
| C12 |
H2 |
1.080 |
1.081 |
| N13 |
H3 |
1.000 |
0.970 |
| C15 |
H4 |
1.080 |
1.080 |
| C17 |
H5 |
1.100 |
1.090 |
| C17 |
H6 |
1.100 |
1.089 |
| C21 |
H7 |
1.100 |
1.090 |
| C21 |
H8 |
1.100 |
1.090 |
| C22 |
H9 |
1.100 |
1.090 |
| C26 |
H10 |
1.100 |
1.091 |
| C26 |
H11 |
1.100 |
1.090 |
| C27 |
H12 |
1.080 |
1.080 |
| C28 |
H13 |
1.080 |
1.081 |
| C29 |
H14 |
1.080 |
1.079 |
| C30 |
H15 |
1.080 |
1.080 |
| C31 |
H16 |
1.080 |
1.080 |
| O32 |
H17 |
0.950 |
0.967 |
| C33 |
H18 |
1.080 |
1.080 |
| C36 |
H19 |
1.100 |
1.090 |
| C36 |
H20 |
1.100 |
1.089 |
| C36 |
H21 |
1.100 |
1.090 |
| C37 |
H22 |
1.100 |
1.090 |
| C37 |
H23 |
1.100 |
1.090 |
| C37 |
H24 |
1.100 |
1.089 |
Bond Angles for 0VF
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C26 |
C22 |
H9 |
109.4 |
110.4 |
| C26 |
C21 |
H7 |
111.4 |
110.5 |
| C26 |
C21 |
H8 |
111.5 |
110.5 |
| C22 |
N13 |
H3 |
119.0 |
120.1 |
| C22 |
C17 |
H5 |
111.0 |
110.4 |
| C22 |
C17 |
H6 |
111.0 |
110.6 |
| C29 |
C28 |
H13 |
120.0 |
120.0 |
| C28 |
C29 |
H14 |
120.1 |
120.0 |
| N13 |
C10 |
C18 |
118.8 |
120.0 |
| C10 |
N13 |
H3 |
119.0 |
119.9 |
| C10 |
C18 |
C27 |
120.9 |
120.0 |
| C29 |
C20 |
C30 |
120.0 |
120.0 |
| C18 |
C27 |
C30 |
119.5 |
120.0 |
| C18 |
C27 |
H12 |
120.3 |
120.0 |
| O25 |
C14 |
O32 |
119.7 |
120.0 |
| C20 |
C14 |
O32 |
119.9 |
120.0 |
| C20 |
C30 |
C27 |
120.3 |
120.0 |
| C20 |
C30 |
H15 |
119.8 |
120.0 |
| C30 |
C27 |
H12 |
120.2 |
120.0 |
| C27 |
C30 |
H15 |
119.9 |
120.0 |
| C14 |
O32 |
H17 |
109.5 |
117.0 |
| N2 |
C1 |
N3 |
121.9 |
121.8 |
| C1 |
N3 |
C5 |
119.8 |
120.8 |
| C1 |
N2 |
C4 |
122.2 |
121.3 |
| N3 |
C5 |
C6 |
122.1 |
119.8 |
| N3 |
C5 |
S9 |
133.4 |
132.0 |
| N2 |
C4 |
C6 |
118.3 |
119.2 |
| N2 |
C4 |
N11 |
122.5 |
120.4 |
| C16 |
C15 |
C19 |
120.3 |
120.0 |
| C16 |
C15 |
H4 |
119.9 |
120.1 |
| C16 |
C23 |
C31 |
119.7 |
120.0 |
| C15 |
C19 |
C33 |
118.9 |
120.0 |
| C19 |
C15 |
H4 |
119.8 |
120.0 |
| C6 |
C5 |
S9 |
104.5 |
108.2 |
| C4 |
C6 |
C5 |
115.7 |
117.1 |
| C5 |
C6 |
N8 |
114.4 |
113.0 |
| C5 |
S9 |
C12 |
95.2 |
90.4 |
| C6 |
C4 |
N11 |
119.2 |
120.4 |
| C4 |
C6 |
N8 |
129.9 |
129.9 |
| C4 |
N11 |
H1 |
115.5 |
120.0 |
| O35 |
C37 |
H22 |
109.5 |
109.5 |
| O35 |
C37 |
H23 |
109.4 |
109.5 |
| O35 |
C37 |
H24 |
109.4 |
109.4 |
| C23 |
C31 |
C33 |
120.1 |
120.1 |
| C23 |
C31 |
H16 |
119.9 |
119.9 |
| C6 |
N8 |
C12 |
121.6 |
118.0 |
| C19 |
N11 |
H1 |
115.4 |
120.0 |
| C19 |
C33 |
C31 |
121.1 |
120.1 |
| C19 |
C33 |
H18 |
119.4 |
120.0 |
| N8 |
C12 |
S9 |
104.3 |
110.5 |
| S9 |
C12 |
H2 |
127.8 |
124.8 |
| C33 |
C31 |
H16 |
119.9 |
120.0 |
| C31 |
C33 |
H18 |
119.4 |
120.0 |
| N8 |
C12 |
H2 |
127.9 |
124.7 |
| H5 |
C17 |
H6 |
109.5 |
110.4 |
| H7 |
C21 |
H8 |
109.5 |
110.3 |
| H10 |
C26 |
H11 |
109.5 |
110.3 |
| H19 |
C36 |
H20 |
109.5 |
109.5 |
| H19 |
C36 |
H21 |
109.5 |
109.5 |
| H20 |
C36 |
H21 |
109.5 |
109.5 |
| H22 |
C37 |
H23 |
109.5 |
109.4 |
| H22 |
C37 |
H24 |
109.5 |
109.5 |
| H23 |
C37 |
H24 |
109.5 |
109.5 |
Torsion Angles for 0VF
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C22 |
C26 |
C21 |
H7 |
148.1 |
265.1 |
| C22 |
C26 |
C21 |
H8 |
270.8 |
142.7 |
| C26 |
C22 |
N13 |
H3 |
342.3 |
337.8 |
| C26 |
C22 |
C17 |
H5 |
107.2 |
217.4 |
| C26 |
C22 |
C17 |
H6 |
229.2 |
95.0 |
| H7 |
C21 |
C26 |
H8 |
237.3 |
122.4 |
| O24 |
C10 |
N13 |
H3 |
180.0 |
180.1 |
| O24 |
C10 |
C18 |
C27 |
53.1 |
0.0 |
| C10 |
N13 |
C22 |
H3 |
180.0 |
180.1 |
| C17 |
C22 |
N13 |
H3 |
99.5 |
93.5 |
| H5 |
C17 |
C22 |
H6 |
237.9 |
122.4 |
| C28 |
C29 |
C20 |
C30 |
0.1 |
0.2 |
| C28 |
C18 |
C27 |
C30 |
359.9 |
0.3 |
| C28 |
C18 |
C27 |
H12 |
179.9 |
180.3 |
| C22 |
N13 |
C10 |
H3 |
180.0 |
179.9 |
| N13 |
C10 |
C18 |
C27 |
232.2 |
180.0 |
| C18 |
C10 |
N13 |
H3 |
0.9 |
0.1 |
| C10 |
C18 |
C27 |
C30 |
180.4 |
180.0 |
| C10 |
C18 |
C27 |
H12 |
0.4 |
359.9 |
| C29 |
C20 |
C14 |
O32 |
179.3 |
0.3 |
| C29 |
C20 |
C30 |
C27 |
359.9 |
359.8 |
| C29 |
C20 |
C30 |
H15 |
179.9 |
180.0 |
| C20 |
C30 |
C27 |
C18 |
0.1 |
359.9 |
| C30 |
C27 |
C18 |
H12 |
180.0 |
180.1 |
| C18 |
C27 |
C30 |
H15 |
180.1 |
179.7 |
| C20 |
C14 |
O25 |
O32 |
179.6 |
180.1 |
| O25 |
C14 |
O32 |
H17 |
0.0 |
0.1 |
| O25 |
C14 |
C20 |
O32 |
180.4 |
179.9 |
| C20 |
C14 |
O32 |
H17 |
180.4 |
180.0 |
| C18 |
C27 |
C30 |
C20 |
0.1 |
359.9 |
| C30 |
C20 |
C14 |
O32 |
359.2 |
180.0 |
| C20 |
C30 |
C27 |
H12 |
180.1 |
180.0 |
| C27 |
C30 |
C20 |
H15 |
180.0 |
179.8 |
| C18 |
C27 |
C30 |
H12 |
180.0 |
179.9 |
| C20 |
C30 |
C27 |
H15 |
180.0 |
180.2 |
| N3 |
C1 |
N2 |
C4 |
1.0 |
359.9 |
| C1 |
N3 |
C5 |
C6 |
0.3 |
0.0 |
| C1 |
N3 |
C5 |
S9 |
180.7 |
180.0 |
| N2 |
C1 |
N3 |
C5 |
359.2 |
0.0 |
| C1 |
N2 |
C4 |
C6 |
359.3 |
0.1 |
| C1 |
N2 |
C4 |
N11 |
179.8 |
180.0 |
| C6 |
C5 |
N3 |
S9 |
179.6 |
180.0 |
| C4 |
C6 |
C5 |
N3 |
0.0 |
360.0 |
| N3 |
C5 |
C6 |
N8 |
180.2 |
180.0 |
| N3 |
C5 |
S9 |
C12 |
179.7 |
180.0 |
| O34 |
C16 |
C15 |
H4 |
359.6 |
359.7 |
| C4 |
N2 |
C1 |
N3 |
1.0 |
359.9 |
| N2 |
C4 |
C6 |
C5 |
0.2 |
360.0 |
| C6 |
C4 |
N2 |
N11 |
179.5 |
180.1 |
| N2 |
C4 |
C6 |
N8 |
179.9 |
179.9 |
| N2 |
C4 |
N11 |
H1 |
170.2 |
174.5 |
| C16 |
C15 |
C19 |
C33 |
0.1 |
359.6 |
| C19 |
C15 |
C16 |
H4 |
180.0 |
180.4 |
| C23 |
C16 |
C15 |
C19 |
0.6 |
0.0 |
| C23 |
C16 |
C15 |
H4 |
180.5 |
179.7 |
| C16 |
C23 |
C31 |
C33 |
1.0 |
0.2 |
| C16 |
C23 |
C31 |
H16 |
181.0 |
180.0 |
| C16 |
C15 |
C19 |
H4 |
180.0 |
179.6 |
| C15 |
C19 |
N11 |
H1 |
178.8 |
326.9 |
| C15 |
C19 |
C33 |
C31 |
359.8 |
0.6 |
| C15 |
C19 |
C33 |
H18 |
179.8 |
180.0 |
| N3 |
C5 |
C6 |
S9 |
180.3 |
180.0 |
| C6 |
C5 |
S9 |
C12 |
0.1 |
360.0 |
| C5 |
C6 |
C4 |
N11 |
179.7 |
180.1 |
| C4 |
C6 |
C5 |
N8 |
179.8 |
180.0 |
| C5 |
C6 |
N8 |
C12 |
0.0 |
360.0 |
| N3 |
C5 |
S9 |
C6 |
179.6 |
180.0 |
| C4 |
C6 |
C5 |
S9 |
179.7 |
180.0 |
| S9 |
C5 |
C6 |
N8 |
359.9 |
0.0 |
| N8 |
C12 |
S9 |
C5 |
359.9 |
0.0 |
| C5 |
S9 |
C12 |
H2 |
179.9 |
180.0 |
| N3 |
C5 |
C6 |
C4 |
0.0 |
360.0 |
| N2 |
C4 |
C6 |
N11 |
180.5 |
179.9 |
| C5 |
C6 |
C4 |
N8 |
180.3 |
180.1 |
| C6 |
C4 |
N11 |
H1 |
350.7 |
354.4 |
| C4 |
C6 |
N8 |
C12 |
180.3 |
180.0 |
| N2 |
C4 |
N11 |
C6 |
179.5 |
180.1 |
| N11 |
C4 |
C6 |
C5 |
179.7 |
180.1 |
| N11 |
C4 |
C6 |
N8 |
359.4 |
0.0 |
| C19 |
N11 |
C4 |
H1 |
180.0 |
180.0 |
| O35 |
C23 |
C31 |
H16 |
359.4 |
0.1 |
| H22 |
C37 |
O35 |
H23 |
240.0 |
240.0 |
| H22 |
C37 |
O35 |
H24 |
120.0 |
120.0 |
| H23 |
C37 |
O35 |
H24 |
240.0 |
240.0 |
| C19 |
C33 |
C31 |
C23 |
359.7 |
359.5 |
| C33 |
C31 |
C23 |
H16 |
180.0 |
180.2 |
| C23 |
C31 |
C33 |
H18 |
179.7 |
180.1 |
| N8 |
C6 |
C5 |
S9 |
359.9 |
0.0 |
| C4 |
C6 |
N8 |
C5 |
180.2 |
180.1 |
| N8 |
C6 |
C4 |
N11 |
359.4 |
0.0 |
| C6 |
N8 |
C12 |
S9 |
0.0 |
360.0 |
| C6 |
N8 |
C12 |
H2 |
180.0 |
180.0 |
| C4 |
N11 |
C19 |
H1 |
180.0 |
180.0 |
| C33 |
C19 |
C15 |
H4 |
180.1 |
180.0 |
| C23 |
C31 |
C33 |
C19 |
359.7 |
359.5 |
| C33 |
C19 |
N11 |
H1 |
358.6 |
147.0 |
| C19 |
C33 |
C31 |
H16 |
179.7 |
179.7 |
| C31 |
C33 |
C19 |
H18 |
180.0 |
180.6 |
| N8 |
C12 |
S9 |
H2 |
180.0 |
180.0 |
| C23 |
C31 |
C33 |
H16 |
180.0 |
179.8 |
| C19 |
C33 |
C31 |
H18 |
180.0 |
179.4 |
| C5 |
S9 |
C12 |
N8 |
359.9 |
0.0 |
| S9 |
C12 |
N8 |
H2 |
180.0 |
180.0 |
| N8 |
C12 |
H2 |
S9 |
180.0 |
180.0 |
| H3 |
N13 |
C10 |
C18 |
0.9 |
0.1 |
| C16 |
C15 |
H4 |
C19 |
180.0 |
180.4 |
| H4 |
C15 |
C19 |
C33 |
180.1 |
180.0 |
| C22 |
C17 |
H5 |
H6 |
122.9 |
237.5 |
| C22 |
C17 |
H6 |
H5 |
237.0 |
122.5 |
| C26 |
C21 |
H7 |
H8 |
123.8 |
237.5 |
| C26 |
C21 |
H8 |
H7 |
236.2 |
122.5 |
| H9 |
C22 |
N13 |
H3 |
221.4 |
215.7 |
| H9 |
C22 |
C17 |
H5 |
225.4 |
336.4 |
| H9 |
C22 |
C17 |
H6 |
347.5 |
214.0 |
| H10 |
C26 |
C22 |
H9 |
349.7 |
122.1 |
| H10 |
C26 |
C21 |
H7 |
28.9 |
24.0 |
| H10 |
C26 |
C21 |
H8 |
151.5 |
261.6 |
| H11 |
C26 |
C22 |
H9 |
111.3 |
359.9 |
| H11 |
C26 |
C21 |
H7 |
267.3 |
146.1 |
| H11 |
C26 |
C21 |
H8 |
30.0 |
23.7 |
| C18 |
C27 |
H12 |
C30 |
180.0 |
180.1 |
| H12 |
C27 |
C30 |
H15 |
0.1 |
359.8 |
| H13 |
C28 |
C29 |
H14 |
359.9 |
0.1 |
| H14 |
C29 |
C28 |
H13 |
359.9 |
0.1 |
| H14 |
C29 |
C20 |
C30 |
180.1 |
180.2 |
| C20 |
C30 |
H15 |
C27 |
180.0 |
179.8 |
| H15 |
C30 |
C27 |
H12 |
0.1 |
359.8 |
| C23 |
C31 |
H16 |
C33 |
180.0 |
180.2 |
| H16 |
C31 |
C33 |
H18 |
359.7 |
0.3 |
| C19 |
C33 |
H18 |
C31 |
180.0 |
180.6 |
| H18 |
C33 |
C31 |
H16 |
359.7 |
0.3 |
| H20 |
C36 |
H19 |
H21 |
120.0 |
120.0 |
| H19 |
C36 |
H20 |
H21 |
240.0 |
240.0 |
| H19 |
C36 |
H21 |
H20 |
120.0 |
120.1 |
| O35 |
C37 |
H22 |
H23 |
120.0 |
120.0 |
| O35 |
C37 |
H22 |
H24 |
240.0 |
240.0 |
| H23 |
C37 |
H22 |
H24 |
120.0 |
120.0 |
| O35 |
C37 |
H23 |
H22 |
240.0 |
240.0 |
| O35 |
C37 |
H23 |
H24 |
120.0 |
120.0 |
| H22 |
C37 |
H23 |
H24 |
240.0 |
240.0 |
| O35 |
C37 |
H24 |
H22 |
120.0 |
120.0 |
| O35 |
C37 |
H24 |
H23 |
240.0 |
240.0 |
| H22 |
C37 |
H24 |
H23 |
120.0 |
120.0 |