PDB Chemical Component 0VA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0VA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O27 |
C19 |
1.441 |
1.429 |
| O27 |
C11 |
1.433 |
1.358 |
| C03 |
C11 |
1.540 |
1.388 |
| C03 |
C01 |
1.537 |
1.379 |
| C11 |
C04 |
1.530 |
1.389 |
| C01 |
C07 |
1.540 |
1.394 |
| C04 |
C02 |
1.527 |
1.379 |
| C07 |
C02 |
1.544 |
1.394 |
| C07 |
C14 |
1.524 |
1.483 |
| CL1 |
C12 |
1.778 |
1.735 |
| N21 |
C14 |
1.480 |
1.303 |
| N21 |
S28 |
1.631 |
1.693 |
| C14 |
C08 |
1.518 |
1.446 |
| N23 |
C10 |
1.487 |
1.398 |
| S28 |
C15 |
1.764 |
1.717 |
| C12 |
C10 |
1.529 |
1.390 |
| C12 |
C05 |
1.517 |
1.383 |
| C08 |
C15 |
1.506 |
1.376 |
| C08 |
C16 |
1.523 |
1.471 |
| C10 |
C13 |
1.522 |
1.390 |
| C05 |
C09 |
1.519 |
1.382 |
| O26 |
C16 |
1.426 |
1.216 |
| C15 |
C18 |
1.518 |
1.507 |
| C16 |
N22 |
1.493 |
1.347 |
| C13 |
CL2 |
1.753 |
1.736 |
| C13 |
C06 |
1.517 |
1.383 |
| C09 |
C06 |
1.510 |
1.383 |
| C09 |
C20 |
1.501 |
1.507 |
| N25 |
C20 |
1.461 |
1.466 |
| N25 |
C17 |
1.463 |
1.375 |
| N22 |
C17 |
1.462 |
1.381 |
| C17 |
N24 |
1.476 |
1.302 |
| C01 |
H1 |
1.080 |
1.080 |
| C02 |
H2 |
1.080 |
1.079 |
| C03 |
H3 |
1.080 |
1.080 |
| C04 |
H4 |
1.080 |
1.080 |
| C05 |
H5 |
1.080 |
1.080 |
| C06 |
H6 |
1.080 |
1.080 |
| C18 |
H7 |
1.100 |
1.090 |
| C18 |
H8 |
1.100 |
1.090 |
| C18 |
H9 |
1.100 |
1.090 |
| C19 |
H10 |
1.100 |
1.090 |
| C19 |
H11 |
1.100 |
1.091 |
| C19 |
H12 |
1.100 |
1.090 |
| C20 |
H13 |
1.100 |
1.090 |
| C20 |
H14 |
1.100 |
1.090 |
| N22 |
H15 |
1.000 |
0.970 |
| N23 |
H16 |
1.000 |
0.970 |
| N23 |
H17 |
1.000 |
0.970 |
| N24 |
H18 |
1.000 |
0.970 |
| N25 |
H19 |
1.000 |
0.970 |
Bond Angles for 0VA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O27 |
C19 |
H10 |
109.5 |
109.5 |
| O27 |
C19 |
H11 |
109.4 |
109.5 |
| O27 |
C19 |
H12 |
109.5 |
109.5 |
| C03 |
C11 |
C04 |
115.6 |
120.1 |
| C11 |
C03 |
H3 |
118.8 |
119.9 |
| C03 |
C01 |
C07 |
123.7 |
119.9 |
| C03 |
C01 |
H1 |
118.1 |
120.0 |
| C11 |
C04 |
H4 |
119.9 |
120.0 |
| C01 |
C07 |
C02 |
111.5 |
119.9 |
| C01 |
C07 |
C14 |
140.4 |
120.1 |
| C07 |
C01 |
H1 |
118.2 |
120.1 |
| C04 |
C02 |
H2 |
116.7 |
120.0 |
| C07 |
C02 |
H2 |
116.7 |
120.1 |
| C07 |
C14 |
C08 |
141.9 |
122.2 |
| C14 |
C08 |
C15 |
116.0 |
113.0 |
| C14 |
C08 |
C16 |
129.4 |
123.5 |
| C12 |
C10 |
C13 |
112.8 |
119.9 |
| C12 |
C05 |
H5 |
118.7 |
119.9 |
| C15 |
C08 |
C16 |
114.0 |
123.5 |
| C08 |
C15 |
C18 |
130.9 |
126.9 |
| C08 |
C16 |
N22 |
134.8 |
120.0 |
| C10 |
C13 |
CL2 |
117.8 |
120.1 |
| C05 |
C09 |
C06 |
116.8 |
120.2 |
| C05 |
C09 |
C20 |
113.0 |
119.9 |
| C09 |
C05 |
H5 |
118.7 |
120.0 |
| C15 |
C18 |
H7 |
109.5 |
109.5 |
| C15 |
C18 |
H8 |
109.5 |
109.5 |
| C15 |
C18 |
H9 |
109.5 |
109.5 |
| C16 |
N22 |
C17 |
117.2 |
120.0 |
| C16 |
N22 |
H15 |
121.4 |
120.0 |
| C13 |
C06 |
H6 |
120.4 |
120.0 |
| C09 |
C06 |
H6 |
120.4 |
120.0 |
| C09 |
C20 |
H13 |
106.6 |
109.5 |
| C09 |
C20 |
H14 |
106.6 |
109.5 |
| N25 |
C20 |
H13 |
106.6 |
109.5 |
| N25 |
C20 |
H14 |
106.6 |
109.5 |
| N22 |
C17 |
N24 |
128.5 |
120.0 |
| C17 |
N24 |
H18 |
112.0 |
120.0 |
| H7 |
C18 |
H8 |
109.4 |
109.4 |
| H7 |
C18 |
H9 |
109.5 |
109.5 |
| H8 |
C18 |
H9 |
109.5 |
109.5 |
| H10 |
C19 |
H11 |
109.5 |
109.5 |
| H10 |
C19 |
H12 |
109.5 |
109.5 |
| H11 |
C19 |
H12 |
109.5 |
109.5 |
| H13 |
C20 |
H14 |
109.5 |
109.5 |
| H16 |
N23 |
H17 |
109.5 |
120.0 |
Torsion Angles for 0VA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H10 |
C19 |
O27 |
H11 |
240.0 |
240.0 |
| H10 |
C19 |
O27 |
H12 |
120.0 |
120.0 |
| H11 |
C19 |
O27 |
H12 |
240.0 |
240.0 |
| O27 |
C11 |
C03 |
H3 |
359.6 |
360.0 |
| O27 |
C11 |
C04 |
H4 |
0.3 |
0.3 |
| C11 |
C03 |
C01 |
C07 |
0.9 |
0.0 |
| C11 |
C03 |
C01 |
H1 |
180.9 |
179.7 |
| C03 |
C11 |
C04 |
H4 |
179.9 |
180.3 |
| C03 |
C01 |
C07 |
C02 |
358.6 |
359.7 |
| C03 |
C01 |
C07 |
C14 |
181.5 |
179.7 |
| C07 |
C01 |
C03 |
H1 |
180.0 |
180.3 |
| C04 |
C11 |
C03 |
H3 |
179.9 |
180.0 |
| C11 |
C04 |
C02 |
H2 |
179.3 |
180.0 |
| C03 |
C01 |
C07 |
H1 |
180.0 |
179.7 |
| C01 |
C07 |
C02 |
H2 |
181.4 |
180.0 |
| C01 |
C07 |
C14 |
C08 |
124.5 |
145.0 |
| C01 |
C07 |
C02 |
C04 |
1.3 |
0.6 |
| C07 |
C02 |
C04 |
H2 |
180.0 |
179.4 |
| C01 |
C07 |
C02 |
C14 |
182.0 |
180.0 |
| C02 |
C07 |
C01 |
H1 |
178.5 |
180.0 |
| C04 |
C02 |
C07 |
H2 |
180.0 |
180.6 |
| C01 |
C07 |
C14 |
C02 |
177.1 |
180.0 |
| C14 |
C07 |
C01 |
H1 |
1.5 |
360.0 |
| C14 |
C07 |
C02 |
H2 |
359.4 |
0.0 |
| C07 |
C14 |
C08 |
C15 |
183.7 |
180.0 |
| C07 |
C14 |
C08 |
C16 |
13.1 |
359.8 |
| CL1 |
C12 |
C05 |
H5 |
358.5 |
0.2 |
| C15 |
C08 |
C14 |
C16 |
170.6 |
180.2 |
| C14 |
C08 |
C15 |
C18 |
181.9 |
179.8 |
| C14 |
C08 |
C16 |
N22 |
102.0 |
90.2 |
| N23 |
C10 |
C13 |
CL2 |
359.3 |
359.3 |
| S28 |
C15 |
C18 |
H7 |
360.0 |
270.0 |
| S28 |
C15 |
C18 |
H8 |
120.0 |
30.0 |
| S28 |
C15 |
C18 |
H9 |
240.0 |
150.0 |
| C10 |
C12 |
C05 |
H5 |
179.7 |
180.3 |
| C12 |
C10 |
C13 |
CL2 |
179.9 |
180.0 |
| C12 |
C05 |
C09 |
C20 |
178.7 |
180.3 |
| C09 |
C05 |
C12 |
H5 |
180.0 |
179.7 |
| C14 |
C08 |
C15 |
C16 |
188.0 |
179.8 |
| C15 |
C08 |
C16 |
N22 |
291.3 |
270.0 |
| C08 |
C15 |
C18 |
H7 |
183.4 |
90.0 |
| C08 |
C15 |
C18 |
H8 |
303.4 |
210.0 |
| C08 |
C15 |
C18 |
H9 |
63.4 |
330.0 |
| C14 |
C08 |
C16 |
C15 |
170.7 |
180.2 |
| C16 |
C08 |
C15 |
C18 |
354.0 |
360.0 |
| C08 |
C16 |
N22 |
C17 |
182.2 |
174.5 |
| C08 |
C16 |
N22 |
H15 |
2.2 |
354.5 |
| C10 |
C13 |
C06 |
H6 |
180.0 |
179.5 |
| C12 |
C05 |
C09 |
H5 |
180.0 |
180.3 |
| C05 |
C09 |
C06 |
H6 |
178.4 |
180.0 |
| C05 |
C09 |
C20 |
H13 |
37.3 |
210.0 |
| C05 |
C09 |
C20 |
H14 |
154.2 |
330.0 |
| O26 |
C16 |
N22 |
H15 |
175.9 |
174.5 |
| C18 |
C15 |
C08 |
C16 |
354.0 |
360.0 |
| H7 |
C18 |
C15 |
H8 |
240.0 |
240.1 |
| H7 |
C18 |
C15 |
H9 |
120.0 |
120.0 |
| H8 |
C18 |
C15 |
H9 |
240.0 |
240.0 |
| C16 |
N22 |
C17 |
N24 |
181.9 |
185.2 |
| CL2 |
C13 |
C06 |
H6 |
1.4 |
0.3 |
| C09 |
C06 |
C13 |
H6 |
180.0 |
179.9 |
| C05 |
C09 |
C06 |
C20 |
176.4 |
180.0 |
| C06 |
C09 |
C05 |
H5 |
181.7 |
180.0 |
| C13 |
C06 |
C09 |
H6 |
180.0 |
180.1 |
| C05 |
C09 |
C20 |
C06 |
183.5 |
180.0 |
| C20 |
C09 |
C05 |
H5 |
358.7 |
360.0 |
| C20 |
C09 |
C06 |
H6 |
2.0 |
359.9 |
| N25 |
C20 |
C09 |
H13 |
238.5 |
240.0 |
| N25 |
C20 |
C09 |
H14 |
121.6 |
120.0 |
| H13 |
C20 |
C09 |
H14 |
243.1 |
240.0 |
| C09 |
C20 |
N25 |
H13 |
121.5 |
120.0 |
| C09 |
C20 |
N25 |
H14 |
238.4 |
240.0 |
| H13 |
C20 |
N25 |
H14 |
116.9 |
120.0 |
| N25 |
C17 |
N24 |
H18 |
180.2 |
185.0 |
| C16 |
N22 |
C17 |
H15 |
180.0 |
180.0 |
| N22 |
C17 |
N24 |
H18 |
0.0 |
5.0 |
| C03 |
C01 |
H1 |
C07 |
180.0 |
180.3 |
| H1 |
C01 |
C07 |
C02 |
178.5 |
180.0 |
| H1 |
C01 |
C07 |
C14 |
1.5 |
360.0 |
| H3 |
C03 |
C11 |
C04 |
179.9 |
180.0 |
| H3 |
C03 |
C01 |
C07 |
180.9 |
180.0 |
| H3 |
C03 |
C01 |
H1 |
0.9 |
359.7 |
| H4 |
C04 |
C02 |
H2 |
359.3 |
360.0 |
| H5 |
C05 |
C09 |
C06 |
181.7 |
180.0 |
| H5 |
C05 |
C09 |
C20 |
358.7 |
360.0 |
| C15 |
C18 |
H7 |
H8 |
120.0 |
120.0 |
| C15 |
C18 |
H7 |
H9 |
240.0 |
240.0 |
| H8 |
C18 |
H7 |
H9 |
120.0 |
120.0 |
| C15 |
C18 |
H8 |
H7 |
240.0 |
240.0 |
| C15 |
C18 |
H8 |
H9 |
120.0 |
120.0 |
| H7 |
C18 |
H8 |
H9 |
240.0 |
240.0 |
| C15 |
C18 |
H9 |
H7 |
120.0 |
120.0 |
| C15 |
C18 |
H9 |
H8 |
240.0 |
240.0 |
| H7 |
C18 |
H9 |
H8 |
120.0 |
120.0 |
| O27 |
C19 |
H10 |
H11 |
120.0 |
120.0 |
| O27 |
C19 |
H10 |
H12 |
240.0 |
240.0 |
| H11 |
C19 |
H10 |
H12 |
120.0 |
120.0 |
| O27 |
C19 |
H11 |
H10 |
240.0 |
240.0 |
| O27 |
C19 |
H11 |
H12 |
120.0 |
120.0 |
| H10 |
C19 |
H11 |
H12 |
240.0 |
240.0 |
| O27 |
C19 |
H12 |
H10 |
120.0 |
120.0 |
| O27 |
C19 |
H12 |
H11 |
240.0 |
240.0 |
| H10 |
C19 |
H12 |
H11 |
120.0 |
120.0 |
| C09 |
C20 |
H13 |
H14 |
115.0 |
120.0 |
| N25 |
C20 |
H13 |
H14 |
245.0 |
240.0 |
| C09 |
C20 |
H14 |
H13 |
245.0 |
240.0 |
| N25 |
C20 |
H14 |
H13 |
115.0 |
120.0 |
| C16 |
N22 |
H15 |
C17 |
180.0 |
180.0 |
| H15 |
N22 |
C17 |
N24 |
1.9 |
5.2 |
| H19 |
N25 |
C20 |
H13 |
322.0 |
240.0 |
| H19 |
N25 |
C20 |
H14 |
205.2 |
120.0 |