PDB Chemical Component 0U5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0U5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N01 HN01 1.000 0.971
N01 HN0A 1.000 0.969
C02 N01 1.454 1.385
C02 N36 1.341 1.329
C03 C02 1.429 1.396
C04 C03 1.544 1.507
C04 H04 1.100 1.090
C04 H04A 1.100 1.090
C05 C04 1.540 1.507
C05 C31 1.404 1.377
C06 C05 1.409 1.385
C06 H06 1.080 1.081
C07 C06 1.403 1.386
C07 C10 1.403 1.391
O08 C07 1.392 1.359
C09 O08 1.396 1.430
C09 H09 1.100 1.090
C09 H09A 1.100 1.090
C09 H09B 1.100 1.089
C10 C13 1.411 1.403
O11 C10 1.386 1.358
C12 O11 1.403 1.429
C12 H12 1.100 1.090
C12 H12A 1.100 1.090
C12 H12B 1.100 1.090
C13 C14 1.539 1.470
C13 C31 1.393 1.399
C14 C15 1.398 1.350
C14 H14 1.080 1.080
C15 C16 1.544 1.462
C15 H15 1.081 1.080
C16 N17 1.439 1.348
N17 C20 1.456 1.469
N17 N18 1.367 1.403
N18 C19 1.433 1.300
C19 C25 1.502 1.474
C20 C24 1.501 1.508
C20 H20 1.100 1.090
C21 C20 1.550 1.507
C21 H21 1.080 1.080
C22 C21 1.536 1.311
C22 C37 1.550 1.507
C23 C22 1.460 1.507
C23 H23 1.100 1.090
C23 H23A 1.100 1.090
C23 H22 1.100 1.090
C24 C29 1.431 1.377
C24 C25 1.383 1.394
C25 C26 1.438 1.396
C26 C27 1.405 1.380
C26 H26 1.080 1.080
C27 H27 1.080 1.080
C28 C27 1.414 1.384
C28 H28 1.080 1.080
C29 C28 1.409 1.377
C29 H29 1.080 1.080
O30 C16 1.214 1.217
C31 H31 1.080 1.081
C32 C03 1.441 1.381
C32 N33 1.360 1.325
N33 C34 1.340 1.325
C34 N35 1.446 1.383
C34 N36 1.347 1.325
N35 HN35 1.000 0.971
N35 HN3A 1.000 0.970
C37 H37 1.100 1.090
C37 H37A 1.100 1.089
C37 H37B 1.100 1.090
C38 C32 1.539 1.507
C38 C39 1.519 1.530
C38 H38 1.100 1.090
C38 H38A 1.100 1.090
C39 H39 1.100 1.090
C39 H36 1.100 1.090
C40 C39 1.505 1.530
C40 H40 1.101 1.089
C40 H40A 1.100 1.090
C40 H391 1.099 1.090
C19 H19 1.080 1.079

Bond Angles for 0U5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
HN01 N01 HN0A 109.5 119.9
C02 N01 HN01 109.5 120.0
C02 N01 HN0A 109.5 120.1
C03 C02 N36 121.1 119.1
C02 N36 C34 121.3 120.6
H04 C04 H04A 109.5 109.4
C05 C04 H04 107.7 109.5
C05 C04 H04A 107.7 109.5
C06 C05 C31 120.6 120.3
C05 C31 C13 119.6 120.0
C05 C31 H31 120.2 120.0
C07 C06 H06 120.1 119.7
O08 C07 C10 121.6 120.0
C07 C10 C13 120.7 119.7
H09 C09 H09A 109.5 109.4
H09 C09 H09B 109.5 109.5
H09A C09 H09B 109.4 109.5
O11 C10 C13 117.5 120.2
C10 C13 C14 118.8 120.2
C10 C13 C31 119.9 119.6
H12 C12 H12A 109.5 109.5
H12 C12 H12B 109.5 109.5
H12A C12 H12B 109.4 109.5
C14 C13 C31 121.4 120.2
C13 C14 C15 124.3 120.0
C13 C14 H14 117.9 120.0
C13 C31 H31 120.2 120.0
C15 C14 H14 117.8 120.0
C14 C15 C16 117.1 120.0
C14 C15 H15 121.4 120.0
C16 C15 H15 121.4 120.0
C15 C16 N17 120.2 120.0
C16 N17 C20 121.1 120.2
C16 N17 N18 116.7 120.3
N18 N17 C20 122.2 119.5
N17 C20 C24 112.1 108.5
N17 C20 H20 108.7 109.7
N17 N18 C19 118.1 119.9
N18 C19 C25 113.4 119.5
N18 C19 H19 123.3 120.3
C19 C25 C24 118.9 119.5
C19 C25 C26 120.9 120.8
C25 C19 H19 123.3 120.2
C24 C20 H20 108.1 109.6
C21 C20 C24 107.4 109.6
C20 C24 C29 121.2 120.9
C20 C24 C25 118.3 119.2
C21 C20 H20 107.5 109.8
C22 C21 H21 120.7 120.0
C23 C22 C37 115.9 120.0
C22 C37 H37 109.5 109.4
C22 C37 H37A 109.5 109.5
C22 C37 H37B 109.5 109.4
H23 C23 H23A 109.4 109.4
H23 C23 H22 109.5 109.5
H23A C23 H22 109.5 109.4
C25 C24 C29 120.5 119.9
C24 C29 C28 119.4 120.4
C24 C29 H29 120.3 120.0
C24 C25 C26 120.2 119.7
C25 C26 C27 119.4 119.6
C25 C26 H26 120.3 120.1
C27 C26 H26 120.3 120.3
C26 C27 H27 119.8 119.9
C28 C27 H27 119.9 119.8
C29 C28 H28 119.9 120.1
C32 N33 C34 122.6 120.9
N33 C34 N35 120.0 119.2
N33 C34 N36 120.3 121.6
N35 C34 N36 119.7 119.2
C34 N35 HN35 109.5 120.0
C34 N35 HN3A 109.5 120.0
HN35 N35 HN3A 109.5 120.0
H37 C37 H37A 109.4 109.5
H37 C37 H37B 109.4 109.5
H37A C37 H37B 109.5 109.5
C39 C38 H38 108.2 109.5
C39 C38 H38A 108.3 109.5
C38 C39 H39 106.8 109.5
C38 C39 H36 106.8 109.5
H38 C38 H38A 109.5 109.4
H39 C39 H36 109.5 109.5
C40 C39 H39 106.8 109.5
C40 C39 H36 106.8 109.5
H40 C40 H40A 109.4 109.5
H40 C40 H391 109.5 109.5
H40A C40 H391 109.5 109.4

Torsion Angles for 0U5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 N01 HN01 HN0A 120.0 179.7
C02 N01 HN0A HN01 239.9 180.3
HN01 N01 C02 HN0A 239.9 180.3
N36 C02 N01 HN01 360.0 0.0
N36 C02 N01 HN0A 120.0 179.7
N33 C34 N36 C02 0.8 0.6
N35 C34 N36 C02 180.2 180.3
C03 C02 N01 HN01 180.3 180.3
C03 C02 N01 HN0A 300.4 360.0
C03 C02 N36 C34 359.9 359.5
C04 C03 C02 N36 179.9 180.3
C05 C04 H04 H04A 243.2 240.0
C05 C04 H04A H04 116.8 120.0
H04 C04 C05 H04A 118.0 120.0
C31 C05 C04 H04 307.5 329.6
C31 C05 C04 H04A 189.5 209.7
C10 C13 C31 C05 0.0 0.4
C14 C13 C31 C05 179.1 180.2
C13 C31 C05 H31 180.0 179.8
C06 C05 C04 H04 126.7 149.8
C06 C05 C04 H04A 8.7 29.9
C06 C05 C31 C13 0.5 359.5
C06 C05 C31 H31 180.5 179.7
H06 C06 C05 C31 179.1 180.2
C07 C06 C05 C31 359.1 0.2
C10 C07 C06 H06 180.6 180.0
O11 C10 C07 C13 180.5 180.1
C07 C10 C13 C14 180.6 180.0
C07 C10 C13 C31 359.7 359.8
O08 C07 C06 H06 0.6 360.0
O08 C07 C10 C13 179.9 180.0
C09 O08 C07 C10 155.4 180.0
H09A C09 H09 H09B 119.9 120.0
H09 C09 H09A H09B 240.0 239.9
H09 C09 H09B H09A 120.0 120.0
C05 C31 C13 C10 0.0 0.4
C14 C13 C10 C31 180.9 180.2
C10 C13 C14 C15 234.1 185.8
C10 C13 C14 H14 54.1 5.9
C10 C13 C31 H31 180.0 180.2
C07 C10 O11 C13 179.5 179.9
O11 C10 C13 C14 0.2 359.9
O11 C10 C13 C31 179.3 179.7
C12 O11 C10 C13 281.0 270.1
H12A C12 H12 H12B 120.0 120.0
H12 C12 H12A H12B 240.0 240.0
H12 C12 H12B H12A 120.0 120.0
C05 C31 C13 C14 179.1 180.2
C10 C13 C14 C31 179.1 179.8
C14 C13 C31 H31 359.1 0.0
C15 C14 C13 H14 180.0 179.9
C13 C14 C15 C16 182.9 174.9
C13 C14 C15 H15 2.9 354.9
C05 C31 C13 H31 180.0 180.2
C10 C13 C31 C14 180.9 180.2
C31 C13 C14 C15 55.0 6.0
C31 C13 C14 H14 235.0 186.1
C15 C14 C13 C31 55.0 6.0
C13 C14 C15 H14 180.0 180.1
C16 C15 C14 H15 180.0 180.0
C14 C15 C16 N17 138.8 185.2
H14 C14 C13 C31 235.0 186.1
C13 C14 H14 C15 180.0 179.9
H14 C14 C15 C16 2.9 354.8
H14 C14 C15 H15 182.9 174.8
C16 C15 C14 H14 2.9 354.8
C14 C15 C16 H15 180.0 180.0
C15 C16 N17 C20 180.1 184.5
C15 C16 N17 N18 0.8 4.8
H15 C15 C14 H14 182.9 174.8
C14 C15 H15 C16 180.0 180.0
H15 C15 C16 N17 318.8 5.2
N17 C16 C15 H15 318.8 5.2
N18 N17 C16 C20 180.7 180.3
C16 N17 C20 C24 210.6 223.8
C16 N17 C20 H20 330.1 343.4
C16 N17 N18 C19 182.3 148.0
C16 N17 C20 N18 180.8 180.3
C20 N17 N18 C19 3.0 328.3
C24 C20 N17 H20 240.6 240.3
C21 C20 N17 C24 238.6 240.4
N17 C20 C24 C29 149.6 152.9
N17 C20 C24 C25 329.9 332.9
C21 C20 N17 H20 119.2 120.7
C16 N17 N18 C20 179.2 179.7
N18 N17 C20 C24 29.8 43.5
N18 N17 C20 H20 149.3 163.1
N17 N18 C19 C25 325.3 0.1
N17 N18 C19 H19 145.2 180.0
C19 N18 N17 C20 3.0 328.3
N18 C19 C25 C24 33.4 15.3
N18 C19 C25 C26 213.2 195.6
C25 C19 N18 H19 180.0 180.0
N18 C19 C25 H19 180.0 180.0
C20 C24 C25 C19 359.6 0.4
C19 C25 C24 C29 179.8 180.3
C24 C25 C19 C26 180.3 179.8
C19 C25 C26 C27 180.3 179.9
C19 C25 C26 H26 0.3 359.9
N17 C20 C24 H20 119.8 119.7
C19 C25 C24 C20 359.6 0.4
C21 C20 C24 H20 244.3 239.4
C25 C24 C20 C29 180.2 180.0
C20 C24 C29 C28 180.1 179.5
C20 C24 C29 H29 0.1 359.9
C20 C24 C25 C26 179.9 180.2
N17 C20 H20 C24 238.1 241.0
C21 C20 H20 C24 115.6 120.4
H20 C20 C24 C29 29.9 33.1
H20 C20 C24 C25 210.1 213.1
N17 C20 C21 C24 124.0 118.9
N17 C20 C21 H20 240.2 239.4
C24 C20 C21 H20 116.1 120.4
C21 C20 C24 C29 274.1 272.6
C21 C20 C24 C25 94.3 92.5
H21 C21 C20 C24 271.7 295.4
H21 C21 C20 H20 155.6 174.9
C22 C21 C20 C24 91.8 115.5
C22 C21 C20 H20 335.6 355.0
C37 C22 C21 H21 45.6 179.5
H37 C37 C22 H37A 240.0 240.0
H37 C37 C22 H37B 120.0 120.0
H37A C37 C22 H37B 240.0 240.0
C23 C22 C21 H21 245.3 359.5
C23 C22 C37 H37 342.6 264.2
C23 C22 C37 H37A 102.5 24.2
C23 C22 C37 H37B 222.6 144.2
H23 C23 C22 C37 20.1 180.0
H23A C23 H23 H22 120.0 119.9
H23A C23 C22 C37 140.0 300.0
H23 C23 H23A H22 240.0 240.1
H22 C23 C22 C37 260.0 60.0
H23 C23 H22 H23A 120.0 119.9
C29 C24 C20 H20 29.9 33.1
C20 C24 C29 C25 180.2 180.0
C29 C24 C25 C26 0.1 0.1
C24 C29 C28 H28 180.1 180.2
C19 C25 C24 C26 179.7 180.2
C24 C25 C19 H19 213.4 195.4
C25 C24 C20 H20 210.1 213.1
C20 C24 C25 C29 179.8 180.0
C25 C24 C29 C28 359.8 359.5
C25 C24 C29 H29 179.8 179.9
C24 C25 C26 C27 360.0 0.1
C24 C25 C26 H26 180.0 180.1
C19 C25 C26 C24 180.3 179.8
C26 C25 C19 H19 33.2 15.6
C26 C25 C24 C29 0.1 0.1
C27 C26 C25 H26 180.0 180.0
C25 C26 C27 H27 180.0 180.0
C25 C26 C27 H26 180.0 180.0
C28 C27 C26 H27 180.0 180.1
C25 C26 H26 C27 180.0 180.0
H26 C26 C27 H27 0.0 359.9
H27 C27 C26 H26 0.0 359.9
C24 C29 C28 C27 0.1 0.6
C28 C27 C26 H26 180.0 180.0
C26 C27 C28 H27 180.0 179.9
H28 C28 C27 H27 359.9 0.1
C24 C29 C28 H29 180.0 180.4
C29 C28 C27 H27 179.9 179.7
C24 C29 H29 C28 180.0 179.6
H29 C29 C28 H28 0.1 359.8
O30 C16 C15 H15 139.6 185.2
C05 C31 H31 C13 180.0 179.8
C32 C03 C02 N36 359.2 0.3
C32 N33 C34 N35 179.9 180.0
C32 N33 C34 N36 359.4 359.8
C02 N36 C34 N33 0.8 0.6
N35 C34 N33 N36 180.5 180.3
N33 C34 N35 HN35 0.0 0.0
N33 C34 N35 HN3A 120.0 180.0
C02 N36 C34 N35 180.2 180.3
N33 C34 N35 N36 179.5 179.7
HN35 N35 C34 HN3A 240.0 180.0
N33 C34 N36 N35 180.5 180.3
N36 C34 N35 HN35 180.5 180.3
N36 C34 N35 HN3A 300.6 0.2
HN35 N35 C34 N36 180.5 180.3
C34 N35 HN35 HN3A 120.0 180.0
HN3A N35 C34 N36 300.6 0.2
C34 N35 HN3A HN35 239.9 180.0
C22 C37 H37 H37A 120.0 120.0
C22 C37 H37 H37B 240.0 240.1
H37A C37 H37 H37B 120.0 120.1
C22 C37 H37A H37 240.0 240.0
C22 C37 H37A H37B 120.0 120.0
H37 C37 H37A H37B 240.1 240.0
C22 C37 H37B H37 120.1 119.9
C22 C37 H37B H37A 240.0 240.0
H37 C37 H37B H37A 119.9 120.0
H38 C38 C39 H38A 118.6 120.0
H39 C39 C38 H36 242.9 239.9
C40 C39 C38 H39 238.5 240.0
C40 C39 C38 H36 121.5 120.0
C39 C38 H38 H38A 242.2 240.0
H38 C38 C39 H39 174.2 184.9
H38 C38 C39 H36 291.3 304.9
C39 C38 H38A H38 117.8 120.0
H38A C38 C39 H39 55.7 64.9
H38A C38 C39 H36 172.7 184.9
H39 C39 C38 H38 174.2 184.9
H39 C39 C38 H38A 55.7 64.9
C38 C39 H39 H36 115.2 120.1
C40 C39 H39 H36 244.7 240.0
H36 C39 C38 H38 291.3 304.9
H36 C39 C38 H38A 172.7 184.9
C38 C39 H36 H39 244.8 239.9
C40 C39 H36 H39 115.3 120.0
C40 C39 C38 H38 52.8 64.9
C40 C39 C38 H38A 294.2 304.9
C38 C39 C40 H39 121.4 120.0
C38 C39 C40 H36 238.5 240.0
H39 C39 C40 H36 117.1 120.0
H40 C40 C39 H39 58.6 295.1
H40 C40 C39 H36 301.5 175.1
H40A C40 H40 H391 120.0 120.0
H40A C40 C39 H39 178.5 55.1
H40A C40 C39 H36 61.4 295.1
H40 C40 H40A H391 240.0 240.0
H391 C40 C39 H39 298.6 175.1
H391 C40 C39 H36 181.5 55.0
H40 C40 H391 H40A 120.0 120.0
N18 C19 H19 C25 180.0 180.0
H19 C19 C25 C24 213.4 195.4
H19 C19 C25 C26 33.2 15.6