PDB Chemical Component 0SV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0SV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O26 |
C25 |
1.418 |
1.429 |
| C25 |
C24 |
1.527 |
1.530 |
| C24 |
C23 |
1.534 |
1.529 |
| C23 |
C22 |
1.539 |
1.530 |
| C22 |
C21 |
1.529 |
1.531 |
| C21 |
N19 |
1.478 |
1.465 |
| N19 |
C18 |
1.396 |
1.348 |
| O20 |
C18 |
1.205 |
1.215 |
| C18 |
N17 |
1.397 |
1.347 |
| N17 |
C1 |
1.429 |
1.395 |
| C11 |
C9 |
1.388 |
1.381 |
| C11 |
C6 |
1.394 |
1.388 |
| C9 |
C7 |
1.381 |
1.383 |
| C1 |
C2 |
1.386 |
1.362 |
| C1 |
N5 |
1.351 |
1.360 |
| C2 |
C3 |
1.386 |
1.398 |
| N5 |
C6 |
1.468 |
1.402 |
| N5 |
N4 |
1.249 |
1.400 |
| C14 |
C12 |
1.550 |
1.530 |
| C6 |
C10 |
1.389 |
1.389 |
| C7 |
C16 |
1.505 |
1.507 |
| C7 |
C8 |
1.398 |
1.382 |
| C3 |
N4 |
1.340 |
1.309 |
| C3 |
C12 |
1.534 |
1.507 |
| C12 |
C15 |
1.544 |
1.530 |
| C12 |
C13 |
1.552 |
1.530 |
| C10 |
C8 |
1.393 |
1.381 |
| N19 |
H1 |
1.000 |
0.970 |
| C21 |
H2 |
1.100 |
1.090 |
| C21 |
H3 |
1.100 |
1.089 |
| C22 |
H4 |
1.100 |
1.090 |
| C22 |
H5 |
1.100 |
1.090 |
| C23 |
H6 |
1.100 |
1.090 |
| C23 |
H7 |
1.100 |
1.090 |
| C24 |
H8 |
1.100 |
1.090 |
| C24 |
H9 |
1.100 |
1.091 |
| C25 |
H10 |
1.100 |
1.090 |
| C25 |
H11 |
1.100 |
1.090 |
| O26 |
H12 |
0.950 |
0.967 |
| N17 |
H13 |
0.999 |
0.970 |
| C15 |
H14 |
1.100 |
1.090 |
| C15 |
H15 |
1.100 |
1.090 |
| C15 |
H16 |
1.100 |
1.090 |
| C14 |
H17 |
1.100 |
1.091 |
| C14 |
H18 |
1.100 |
1.090 |
| C14 |
H19 |
1.100 |
1.090 |
| C13 |
H20 |
1.100 |
1.090 |
| C13 |
H21 |
1.100 |
1.090 |
| C13 |
H22 |
1.100 |
1.090 |
| C2 |
H23 |
1.080 |
1.079 |
| C11 |
H24 |
1.080 |
1.080 |
| C9 |
H25 |
1.080 |
1.080 |
| C16 |
H26 |
1.100 |
1.089 |
| C16 |
H27 |
1.100 |
1.090 |
| C16 |
H28 |
1.100 |
1.090 |
| C8 |
H29 |
1.080 |
1.081 |
| C10 |
H30 |
1.079 |
1.080 |
Bond Angles for 0SV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O26 |
C25 |
H10 |
109.7 |
109.5 |
| O26 |
C25 |
H11 |
109.7 |
109.5 |
| C25 |
C24 |
H8 |
109.5 |
109.5 |
| C25 |
C24 |
H9 |
109.5 |
109.5 |
| C24 |
C23 |
H6 |
108.9 |
109.5 |
| C24 |
C23 |
H7 |
108.9 |
109.5 |
| C23 |
C22 |
H4 |
110.0 |
109.5 |
| C23 |
C22 |
H5 |
110.0 |
109.5 |
| C22 |
C21 |
H2 |
107.3 |
109.4 |
| C22 |
C21 |
H3 |
107.4 |
109.5 |
| C21 |
N19 |
H1 |
117.5 |
120.0 |
| N19 |
C18 |
N17 |
118.3 |
120.0 |
| O20 |
C18 |
N17 |
121.3 |
120.0 |
| C18 |
N17 |
C1 |
126.9 |
120.0 |
| C18 |
N17 |
H13 |
116.6 |
119.9 |
| N17 |
C1 |
C2 |
128.4 |
126.2 |
| N17 |
C1 |
N5 |
124.9 |
126.3 |
| C1 |
N17 |
H13 |
116.6 |
120.0 |
| C11 |
C9 |
C7 |
119.7 |
120.1 |
| C9 |
C11 |
H24 |
119.6 |
120.1 |
| C11 |
C9 |
H25 |
120.2 |
120.0 |
| C11 |
C6 |
C10 |
119.7 |
119.9 |
| C9 |
C7 |
C16 |
118.5 |
119.9 |
| C9 |
C7 |
C8 |
119.9 |
120.2 |
| C7 |
C9 |
H25 |
120.2 |
120.0 |
| N5 |
C1 |
C2 |
106.5 |
107.5 |
| C1 |
C2 |
C3 |
104.4 |
107.9 |
| C1 |
C2 |
H23 |
127.8 |
126.1 |
| C1 |
N5 |
C6 |
128.2 |
126.1 |
| C1 |
N5 |
N4 |
111.5 |
107.8 |
| N4 |
N5 |
C6 |
120.3 |
126.1 |
| N5 |
C6 |
C10 |
120.8 |
120.1 |
| C14 |
C12 |
C13 |
110.8 |
109.5 |
| C6 |
C10 |
C8 |
119.5 |
119.9 |
| C6 |
C10 |
H30 |
120.3 |
120.0 |
| C16 |
C7 |
C8 |
121.6 |
119.9 |
| C7 |
C16 |
H26 |
109.5 |
109.5 |
| C7 |
C16 |
H27 |
109.4 |
109.4 |
| C7 |
C16 |
H28 |
109.5 |
109.4 |
| C7 |
C8 |
H29 |
119.8 |
120.0 |
| C3 |
C12 |
C15 |
107.7 |
109.5 |
| C3 |
C12 |
C13 |
111.3 |
109.5 |
| C15 |
C12 |
C13 |
108.7 |
109.5 |
| C12 |
C15 |
H14 |
109.5 |
109.4 |
| C12 |
C15 |
H15 |
109.5 |
109.5 |
| C12 |
C15 |
H16 |
109.5 |
109.5 |
| C12 |
C13 |
H20 |
109.5 |
109.5 |
| C12 |
C13 |
H21 |
109.4 |
109.5 |
| C12 |
C13 |
H22 |
109.5 |
109.5 |
| C10 |
C8 |
H29 |
119.8 |
119.9 |
| H2 |
C21 |
H3 |
109.5 |
109.5 |
| H4 |
C22 |
H5 |
109.4 |
109.5 |
| H6 |
C23 |
H7 |
109.5 |
109.4 |
| H8 |
C24 |
H9 |
109.5 |
109.4 |
| H10 |
C25 |
H11 |
109.5 |
109.5 |
| H14 |
C15 |
H15 |
109.5 |
109.5 |
| H14 |
C15 |
H16 |
109.5 |
109.5 |
| H15 |
C15 |
H16 |
109.5 |
109.5 |
| H17 |
C14 |
H18 |
109.5 |
109.4 |
| H17 |
C14 |
H19 |
109.4 |
109.5 |
| H18 |
C14 |
H19 |
109.5 |
109.5 |
| H20 |
C13 |
H21 |
109.5 |
109.5 |
| H20 |
C13 |
H22 |
109.5 |
109.5 |
| H21 |
C13 |
H22 |
109.5 |
109.5 |
| H26 |
C16 |
H27 |
109.5 |
109.5 |
| H26 |
C16 |
H28 |
109.5 |
109.5 |
| H27 |
C16 |
H28 |
109.4 |
109.5 |
Torsion Angles for 0SV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O26 |
C25 |
C24 |
H8 |
275.8 |
60.0 |
| O26 |
C25 |
C24 |
H9 |
35.8 |
300.0 |
| H10 |
C25 |
O26 |
H11 |
239.7 |
120.0 |
| C25 |
C24 |
C23 |
H6 |
277.0 |
60.0 |
| C25 |
C24 |
C23 |
H7 |
36.3 |
300.0 |
| H8 |
C24 |
C25 |
H9 |
240.0 |
119.9 |
| C24 |
C23 |
C22 |
H4 |
325.0 |
60.0 |
| C24 |
C23 |
C22 |
H5 |
85.6 |
300.0 |
| H6 |
C23 |
C24 |
H7 |
240.7 |
120.0 |
| C23 |
C22 |
C21 |
H2 |
312.9 |
60.0 |
| C23 |
C22 |
C21 |
H3 |
70.5 |
300.0 |
| H4 |
C22 |
C23 |
H5 |
239.4 |
120.0 |
| C22 |
C21 |
N19 |
H1 |
128.4 |
0.0 |
| H2 |
C21 |
C22 |
H3 |
242.4 |
120.0 |
| C21 |
N19 |
C18 |
N17 |
178.3 |
180.3 |
| O20 |
C18 |
N19 |
N17 |
182.9 |
179.8 |
| N19 |
C18 |
N17 |
C1 |
175.7 |
179.7 |
| N19 |
C18 |
N17 |
H13 |
355.7 |
359.7 |
| N19 |
C18 |
O20 |
N17 |
177.0 |
180.2 |
| O20 |
C18 |
N17 |
C1 |
352.8 |
360.0 |
| O20 |
C18 |
N17 |
H13 |
172.8 |
179.9 |
| C18 |
N17 |
C1 |
C2 |
23.2 |
360.0 |
| C18 |
N17 |
C1 |
N5 |
209.1 |
180.3 |
| C1 |
N17 |
C18 |
H13 |
180.0 |
180.1 |
| C18 |
N17 |
C1 |
H13 |
180.0 |
179.9 |
| N5 |
C1 |
N17 |
C2 |
185.9 |
180.3 |
| N17 |
C1 |
C2 |
C3 |
185.2 |
179.9 |
| N17 |
C1 |
C2 |
H23 |
5.2 |
360.0 |
| N17 |
C1 |
N5 |
C6 |
356.6 |
359.9 |
| N17 |
C1 |
N5 |
N4 |
174.9 |
180.0 |
| C9 |
C11 |
C6 |
C10 |
2.1 |
0.3 |
| C11 |
C9 |
C7 |
C16 |
180.3 |
180.0 |
| C11 |
C9 |
C7 |
C8 |
0.3 |
359.9 |
| C7 |
C9 |
C11 |
H25 |
180.0 |
180.1 |
| N5 |
C6 |
C11 |
C10 |
176.9 |
179.7 |
| C11 |
C6 |
C10 |
C8 |
358.2 |
359.4 |
| C11 |
C6 |
C10 |
H30 |
178.2 |
179.7 |
| C7 |
C9 |
C11 |
H24 |
178.7 |
180.0 |
| C11 |
C9 |
C7 |
H25 |
180.0 |
179.9 |
| C16 |
C7 |
C9 |
C8 |
180.0 |
180.0 |
| C9 |
C7 |
C16 |
H26 |
90.0 |
90.0 |
| C9 |
C7 |
C16 |
H27 |
210.0 |
210.0 |
| C9 |
C7 |
C16 |
H28 |
330.0 |
330.0 |
| C9 |
C7 |
C8 |
H29 |
179.9 |
180.0 |
| N17 |
C1 |
C2 |
N5 |
185.1 |
180.3 |
| C2 |
C1 |
N17 |
H13 |
203.2 |
180.0 |
| C2 |
C1 |
N5 |
C6 |
181.4 |
180.2 |
| C2 |
C1 |
N5 |
N4 |
359.8 |
0.3 |
| N17 |
C1 |
N5 |
C2 |
175.2 |
179.7 |
| N5 |
C1 |
N17 |
H13 |
29.1 |
0.3 |
| N5 |
C1 |
C2 |
C3 |
0.2 |
359.6 |
| N5 |
C1 |
C2 |
H23 |
180.2 |
179.7 |
| N4 |
N5 |
C1 |
C6 |
178.3 |
180.1 |
| C1 |
N5 |
C6 |
C10 |
224.5 |
145.0 |
| C1 |
C2 |
C3 |
H23 |
180.0 |
180.1 |
| C11 |
C6 |
N5 |
C10 |
183.1 |
180.3 |
| C6 |
N5 |
C1 |
C2 |
181.4 |
180.2 |
| C1 |
N5 |
C6 |
N4 |
178.2 |
180.1 |
| N5 |
C6 |
C10 |
C8 |
181.3 |
179.7 |
| N5 |
C6 |
C10 |
H30 |
1.3 |
0.0 |
| N4 |
N5 |
C1 |
C2 |
359.8 |
0.3 |
| C1 |
N5 |
N4 |
C6 |
181.5 |
179.9 |
| N4 |
N5 |
C6 |
C10 |
46.3 |
324.9 |
| C3 |
C12 |
C14 |
C13 |
237.4 |
120.0 |
| C15 |
C12 |
C14 |
C13 |
119.9 |
240.0 |
| C14 |
C12 |
C15 |
H14 |
180.0 |
300.0 |
| C14 |
C12 |
C15 |
H15 |
300.0 |
60.0 |
| C14 |
C12 |
C15 |
H16 |
60.0 |
180.0 |
| C14 |
C12 |
C13 |
H20 |
180.0 |
180.0 |
| C14 |
C12 |
C13 |
H21 |
300.0 |
300.0 |
| C14 |
C12 |
C13 |
H22 |
60.0 |
60.0 |
| C6 |
C10 |
C8 |
H29 |
180.8 |
180.4 |
| C9 |
C7 |
C16 |
C8 |
180.0 |
180.0 |
| C16 |
C7 |
C9 |
H25 |
0.3 |
0.0 |
| C16 |
C7 |
C8 |
H29 |
359.9 |
359.9 |
| H26 |
C16 |
C7 |
H27 |
240.0 |
240.0 |
| H26 |
C16 |
C7 |
H28 |
120.0 |
120.0 |
| H27 |
C16 |
C7 |
H28 |
240.0 |
240.0 |
| C9 |
C7 |
C8 |
C16 |
180.0 |
180.0 |
| C8 |
C7 |
C9 |
H25 |
180.3 |
180.0 |
| C6 |
C10 |
C8 |
C7 |
0.8 |
0.6 |
| C8 |
C7 |
C16 |
H26 |
270.0 |
270.0 |
| C8 |
C7 |
C16 |
H27 |
30.0 |
30.0 |
| C8 |
C7 |
C16 |
H28 |
150.0 |
150.0 |
| C10 |
C8 |
C7 |
H29 |
180.0 |
179.8 |
| C1 |
C2 |
C3 |
N4 |
359.9 |
0.4 |
| C3 |
N4 |
N5 |
C6 |
178.7 |
180.0 |
| C1 |
C2 |
C3 |
C12 |
181.3 |
180.1 |
| C14 |
C12 |
C3 |
C13 |
122.3 |
240.0 |
| C15 |
C12 |
C3 |
C13 |
240.9 |
120.0 |
| C3 |
C12 |
C15 |
H14 |
61.9 |
60.0 |
| C3 |
C12 |
C15 |
H15 |
181.9 |
180.0 |
| C3 |
C12 |
C15 |
H16 |
301.9 |
300.0 |
| C3 |
C12 |
C13 |
H20 |
301.1 |
60.0 |
| C3 |
C12 |
C13 |
H21 |
61.1 |
180.0 |
| C3 |
C12 |
C13 |
H22 |
181.1 |
300.0 |
| C14 |
C12 |
C15 |
C13 |
238.8 |
120.0 |
| C3 |
C12 |
C15 |
C13 |
120.7 |
240.0 |
| C15 |
C12 |
C13 |
H20 |
59.6 |
300.0 |
| C15 |
C12 |
C13 |
H21 |
179.6 |
60.0 |
| C15 |
C12 |
C13 |
H22 |
299.6 |
180.0 |
| H14 |
C15 |
C12 |
H15 |
240.0 |
240.0 |
| H14 |
C15 |
C12 |
H16 |
120.0 |
120.0 |
| H15 |
C15 |
C12 |
H16 |
240.0 |
240.0 |
| C3 |
C12 |
C13 |
C15 |
241.5 |
120.0 |
| C13 |
C12 |
C15 |
H14 |
301.2 |
180.0 |
| C13 |
C12 |
C15 |
H15 |
61.2 |
300.0 |
| C13 |
C12 |
C15 |
H16 |
181.2 |
60.0 |
| H20 |
C13 |
C12 |
H21 |
240.0 |
240.0 |
| H20 |
C13 |
C12 |
H22 |
120.0 |
120.0 |
| H21 |
C13 |
C12 |
H22 |
240.0 |
240.0 |
| C6 |
C10 |
C8 |
H30 |
180.0 |
180.3 |
| C7 |
C8 |
C10 |
H29 |
180.0 |
180.2 |
| H1 |
N19 |
C18 |
N17 |
358.3 |
0.2 |
| C22 |
C21 |
H2 |
H3 |
116.3 |
240.0 |
| H2 |
C21 |
N19 |
H1 |
7.3 |
120.0 |
| C22 |
C21 |
H3 |
H2 |
243.8 |
120.0 |
| H3 |
C21 |
N19 |
H1 |
249.6 |
240.0 |
| C23 |
C22 |
H4 |
H5 |
121.0 |
240.0 |
| H4 |
C22 |
C21 |
H2 |
193.2 |
180.0 |
| H4 |
C22 |
C21 |
H3 |
310.8 |
60.0 |
| C23 |
C22 |
H5 |
H4 |
239.0 |
120.0 |
| H5 |
C22 |
C21 |
H2 |
72.6 |
300.1 |
| H5 |
C22 |
C21 |
H3 |
190.2 |
180.0 |
| C24 |
C23 |
H6 |
H7 |
119.0 |
240.0 |
| H6 |
C23 |
C22 |
H4 |
204.6 |
180.0 |
| H6 |
C23 |
C22 |
H5 |
325.2 |
60.0 |
| C24 |
C23 |
H7 |
H6 |
241.0 |
120.0 |
| H7 |
C23 |
C22 |
H4 |
85.3 |
300.0 |
| H7 |
C23 |
C22 |
H5 |
205.9 |
179.9 |
| C25 |
C24 |
H8 |
H9 |
120.0 |
240.0 |
| H8 |
C24 |
C23 |
H6 |
156.9 |
180.0 |
| H8 |
C24 |
C23 |
H7 |
276.3 |
60.1 |
| C25 |
C24 |
H9 |
H8 |
240.0 |
120.0 |
| H9 |
C24 |
C23 |
H6 |
37.0 |
300.0 |
| H9 |
C24 |
C23 |
H7 |
156.3 |
180.0 |
| O26 |
C25 |
H10 |
H11 |
120.4 |
240.0 |
| H10 |
C25 |
C24 |
H8 |
155.9 |
180.0 |
| H10 |
C25 |
C24 |
H9 |
275.9 |
60.0 |
| O26 |
C25 |
H11 |
H10 |
239.5 |
120.0 |
| H11 |
C25 |
C24 |
H8 |
35.6 |
300.0 |
| H11 |
C25 |
C24 |
H9 |
155.6 |
180.0 |
| H12 |
O26 |
C25 |
H10 |
299.9 |
60.1 |
| H12 |
O26 |
C25 |
H11 |
60.2 |
300.1 |
| C18 |
N17 |
H13 |
C1 |
180.0 |
180.1 |
| H13 |
N17 |
C1 |
C2 |
203.2 |
180.0 |
| H13 |
N17 |
C1 |
N5 |
29.1 |
0.3 |
| H14 |
C15 |
C12 |
C13 |
301.2 |
180.0 |
| C12 |
C15 |
H14 |
H15 |
120.0 |
120.0 |
| C12 |
C15 |
H14 |
H16 |
240.0 |
240.0 |
| H15 |
C15 |
H14 |
H16 |
120.0 |
120.0 |
| H15 |
C15 |
C12 |
C13 |
61.2 |
300.0 |
| C12 |
C15 |
H15 |
H14 |
240.0 |
240.0 |
| C12 |
C15 |
H15 |
H16 |
120.0 |
120.0 |
| H14 |
C15 |
H15 |
H16 |
240.0 |
240.0 |
| H16 |
C15 |
C12 |
C13 |
181.2 |
60.0 |
| C12 |
C15 |
H16 |
H14 |
120.0 |
120.0 |
| C12 |
C15 |
H16 |
H15 |
240.0 |
240.0 |
| H14 |
C15 |
H16 |
H15 |
120.0 |
120.0 |
| H17 |
C14 |
C12 |
C13 |
302.6 |
300.0 |
| H18 |
C14 |
H17 |
H19 |
120.0 |
120.0 |
| H18 |
C14 |
C12 |
C13 |
62.6 |
60.0 |
| H17 |
C14 |
H18 |
H19 |
240.0 |
240.0 |
| H19 |
C14 |
C12 |
C13 |
182.6 |
180.0 |
| H17 |
C14 |
H19 |
H18 |
120.0 |
120.0 |
| C12 |
C13 |
H20 |
H21 |
120.0 |
120.0 |
| C12 |
C13 |
H20 |
H22 |
240.0 |
240.0 |
| H21 |
C13 |
H20 |
H22 |
120.0 |
120.0 |
| C12 |
C13 |
H21 |
H20 |
240.0 |
240.0 |
| C12 |
C13 |
H21 |
H22 |
120.0 |
120.0 |
| H20 |
C13 |
H21 |
H22 |
240.0 |
240.0 |
| C12 |
C13 |
H22 |
H20 |
120.1 |
120.0 |
| C12 |
C13 |
H22 |
H21 |
240.0 |
240.0 |
| H20 |
C13 |
H22 |
H21 |
120.0 |
120.0 |
| C1 |
C2 |
H23 |
C3 |
180.0 |
179.9 |
| H24 |
C11 |
C9 |
C7 |
178.7 |
180.0 |
| H24 |
C11 |
C9 |
H25 |
358.7 |
359.9 |
| H24 |
C11 |
C6 |
C10 |
182.1 |
180.3 |
| C11 |
C9 |
H25 |
C7 |
180.0 |
180.1 |
| H25 |
C9 |
C11 |
H24 |
358.7 |
359.9 |
| H25 |
C9 |
C7 |
C16 |
0.3 |
0.0 |
| H25 |
C9 |
C7 |
C8 |
180.3 |
180.0 |
| H26 |
C16 |
C7 |
C8 |
270.0 |
270.0 |
| C7 |
C16 |
H26 |
H27 |
120.0 |
120.0 |
| C7 |
C16 |
H26 |
H28 |
240.0 |
240.0 |
| H27 |
C16 |
H26 |
H28 |
120.0 |
120.0 |
| H27 |
C16 |
C7 |
C8 |
30.0 |
30.0 |
| C7 |
C16 |
H27 |
H26 |
240.0 |
240.0 |
| C7 |
C16 |
H27 |
H28 |
120.0 |
120.0 |
| H26 |
C16 |
H27 |
H28 |
240.0 |
239.9 |
| H28 |
C16 |
C7 |
C8 |
150.0 |
150.0 |
| C7 |
C16 |
H28 |
H26 |
120.0 |
120.0 |
| C7 |
C16 |
H28 |
H27 |
240.0 |
240.0 |
| H26 |
C16 |
H28 |
H27 |
120.0 |
120.0 |
| C6 |
C10 |
H30 |
C8 |
180.0 |
179.7 |
| H30 |
C10 |
C8 |
H29 |
0.9 |
0.1 |