PDB Chemical Component 0QY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0QY
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N20 |
C19 |
1.388 |
1.369 |
| N20 |
C21 |
1.395 |
1.377 |
| C19 |
C18 |
1.396 |
1.342 |
| C22 |
C21 |
1.541 |
1.390 |
| C22 |
C23 |
1.477 |
1.378 |
| C21 |
C26 |
1.390 |
1.407 |
| C18 |
C26 |
1.390 |
1.466 |
| C18 |
C17 |
1.501 |
1.506 |
| C26 |
C25 |
1.542 |
1.396 |
| C23 |
C24 |
1.458 |
1.388 |
| C17 |
C16 |
1.513 |
1.507 |
| C24 |
C25 |
1.478 |
1.366 |
| N27 |
C16 |
1.376 |
1.302 |
| N27 |
C13 |
1.373 |
1.358 |
| C16 |
N15 |
1.385 |
1.359 |
| C13 |
C12 |
1.547 |
1.397 |
| C13 |
C14 |
1.383 |
1.405 |
| N15 |
C14 |
1.370 |
1.383 |
| C12 |
C09 |
1.487 |
1.382 |
| C14 |
C11 |
1.550 |
1.388 |
| O01 |
C02 |
1.224 |
1.213 |
| C05 |
N04 |
1.436 |
1.485 |
| C05 |
C06 |
1.487 |
1.543 |
| N04 |
C03 |
1.463 |
1.486 |
| C09 |
N08 |
1.468 |
1.401 |
| C09 |
C10 |
1.460 |
1.393 |
| C02 |
N08 |
1.455 |
1.348 |
| C02 |
C03 |
1.516 |
1.507 |
| C11 |
C10 |
1.477 |
1.377 |
| C03 |
C07 |
1.491 |
1.544 |
| C06 |
C07 |
1.486 |
1.543 |
| C03 |
H1 |
1.100 |
1.090 |
| N04 |
H2 |
1.000 |
1.009 |
| C05 |
H4 |
1.100 |
1.090 |
| C05 |
H5 |
1.100 |
1.090 |
| C06 |
H6 |
1.100 |
1.089 |
| C06 |
H7 |
1.100 |
1.090 |
| C07 |
H8 |
1.100 |
1.090 |
| C07 |
H9 |
1.100 |
1.089 |
| N08 |
H10 |
1.000 |
0.970 |
| C10 |
H11 |
1.080 |
1.080 |
| C11 |
H12 |
1.080 |
1.080 |
| C12 |
H13 |
1.080 |
1.081 |
| N15 |
H14 |
1.000 |
0.970 |
| C17 |
H15 |
1.100 |
1.090 |
| C17 |
H16 |
1.100 |
1.090 |
| C19 |
H17 |
1.080 |
1.079 |
| N20 |
H18 |
1.000 |
0.970 |
| C22 |
H19 |
1.080 |
1.080 |
| C23 |
H20 |
1.079 |
1.080 |
| C24 |
H21 |
1.080 |
1.080 |
| C25 |
H22 |
1.080 |
1.080 |
Bond Angles for 0QY
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N20 |
C19 |
H17 |
126.0 |
125.1 |
| N20 |
C21 |
C26 |
108.1 |
107.1 |
| C21 |
N20 |
H18 |
126.0 |
125.1 |
| C19 |
C18 |
C26 |
108.1 |
107.0 |
| C22 |
C21 |
C26 |
119.9 |
119.3 |
| C22 |
C23 |
C24 |
120.6 |
120.7 |
| C23 |
C22 |
H19 |
120.2 |
120.1 |
| C22 |
C23 |
H20 |
119.7 |
119.7 |
| C18 |
C26 |
C21 |
107.9 |
106.0 |
| C21 |
C26 |
C25 |
120.6 |
119.9 |
| C18 |
C26 |
C25 |
131.5 |
134.0 |
| C18 |
C17 |
H15 |
108.9 |
109.5 |
| C18 |
C17 |
H16 |
108.9 |
109.4 |
| C26 |
C25 |
H22 |
120.2 |
120.1 |
| C23 |
C24 |
C25 |
119.8 |
120.5 |
| C24 |
C23 |
H20 |
119.7 |
119.7 |
| C23 |
C24 |
H21 |
120.1 |
119.7 |
| C25 |
C24 |
H21 |
120.1 |
119.8 |
| C24 |
C25 |
H22 |
120.2 |
120.1 |
| C16 |
N15 |
H14 |
126.1 |
126.3 |
| C13 |
C12 |
H13 |
119.8 |
120.1 |
| C14 |
C11 |
H12 |
120.1 |
120.1 |
| O01 |
C02 |
N08 |
123.0 |
120.0 |
| O01 |
C02 |
C03 |
118.5 |
120.1 |
| C05 |
N04 |
H2 |
110.1 |
111.0 |
| C05 |
C06 |
C07 |
104.6 |
105.1 |
| C06 |
C05 |
H4 |
110.3 |
110.4 |
| C06 |
C05 |
H5 |
110.3 |
110.4 |
| C05 |
C06 |
H6 |
110.7 |
110.4 |
| C05 |
C06 |
H7 |
110.7 |
110.3 |
| N04 |
C03 |
C07 |
107.4 |
104.6 |
| N04 |
C03 |
H1 |
108.5 |
110.5 |
| C09 |
N08 |
H10 |
117.3 |
120.0 |
| C09 |
C10 |
H11 |
119.6 |
119.8 |
| C03 |
C02 |
N08 |
118.4 |
120.0 |
| C02 |
N08 |
H10 |
117.3 |
120.0 |
| C02 |
C03 |
C07 |
110.3 |
110.4 |
| C02 |
C03 |
H1 |
107.8 |
110.4 |
| C11 |
C10 |
H11 |
119.6 |
119.8 |
| C03 |
C07 |
C06 |
105.5 |
105.1 |
| C07 |
C03 |
H1 |
108.2 |
110.4 |
| C03 |
C07 |
H8 |
110.5 |
110.3 |
| C03 |
C07 |
H9 |
110.5 |
110.3 |
| C07 |
C06 |
H6 |
110.7 |
110.3 |
| C07 |
C06 |
H7 |
110.7 |
110.3 |
| C06 |
C07 |
H8 |
110.4 |
110.3 |
| C06 |
C07 |
H9 |
110.5 |
110.4 |
| H4 |
C05 |
H5 |
109.5 |
110.4 |
| H6 |
C06 |
H7 |
109.5 |
110.4 |
| H8 |
C07 |
H9 |
109.4 |
110.4 |
| H15 |
C17 |
H16 |
109.5 |
109.4 |
Torsion Angles for 0QY
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N20 |
C19 |
C18 |
C26 |
359.7 |
360.0 |
| C21 |
N20 |
C19 |
H17 |
180.3 |
180.0 |
| C22 |
C21 |
N20 |
C26 |
180.2 |
180.1 |
| C18 |
C26 |
C21 |
N20 |
359.9 |
0.0 |
| N20 |
C21 |
C26 |
C25 |
180.0 |
180.0 |
| C19 |
C18 |
C26 |
C21 |
0.2 |
360.0 |
| C19 |
C18 |
C26 |
C25 |
180.2 |
180.0 |
| C19 |
C18 |
C17 |
H15 |
24.0 |
145.3 |
| C19 |
C18 |
C17 |
H16 |
143.3 |
25.3 |
| N20 |
C21 |
C22 |
C26 |
179.8 |
179.9 |
| C22 |
C21 |
N20 |
H18 |
0.1 |
0.1 |
| C18 |
C26 |
C21 |
C22 |
179.8 |
180.0 |
| C22 |
C21 |
C26 |
C25 |
359.8 |
360.0 |
| C23 |
C22 |
C21 |
C26 |
0.1 |
0.0 |
| C22 |
C23 |
C24 |
C25 |
359.9 |
360.0 |
| C24 |
C23 |
C22 |
H20 |
180.0 |
180.1 |
| C22 |
C23 |
C24 |
H21 |
179.8 |
180.0 |
| C26 |
C21 |
N20 |
H18 |
179.9 |
180.1 |
| C18 |
C26 |
C21 |
C25 |
180.0 |
180.0 |
| C21 |
C26 |
C25 |
H22 |
180.1 |
180.0 |
| N20 |
C21 |
C26 |
C18 |
359.9 |
0.0 |
| C22 |
C21 |
C26 |
C18 |
179.8 |
180.0 |
| C21 |
C26 |
C18 |
C25 |
180.0 |
180.0 |
| C26 |
C18 |
C17 |
H15 |
204.8 |
325.0 |
| C26 |
C18 |
C17 |
H16 |
324.1 |
205.0 |
| C18 |
C26 |
C25 |
H22 |
0.2 |
0.0 |
| H15 |
C17 |
C18 |
H16 |
240.6 |
120.0 |
| C18 |
C26 |
C25 |
C21 |
180.0 |
180.0 |
| C26 |
C25 |
C24 |
H21 |
180.1 |
180.0 |
| C24 |
C25 |
C26 |
H22 |
180.0 |
180.0 |
| C24 |
C23 |
C22 |
H19 |
180.1 |
180.0 |
| C22 |
C23 |
C24 |
H20 |
180.0 |
179.9 |
| C25 |
C24 |
C23 |
H21 |
180.0 |
180.0 |
| C23 |
C24 |
C25 |
H22 |
180.0 |
180.0 |
| C17 |
C16 |
N15 |
H14 |
0.4 |
359.9 |
| C21 |
C26 |
C25 |
C24 |
0.1 |
0.0 |
| C18 |
C26 |
C25 |
C24 |
180.1 |
180.0 |
| C26 |
C25 |
C24 |
H22 |
180.0 |
180.0 |
| C25 |
C24 |
C23 |
H20 |
179.9 |
180.1 |
| C23 |
C24 |
C25 |
H21 |
180.0 |
180.0 |
| N27 |
C16 |
N15 |
H14 |
179.7 |
180.0 |
| N27 |
C13 |
C12 |
H13 |
0.0 |
0.0 |
| C14 |
C13 |
C12 |
H13 |
180.1 |
180.0 |
| C13 |
C14 |
C11 |
H12 |
180.2 |
179.8 |
| N15 |
C14 |
C11 |
H12 |
0.3 |
0.1 |
| C12 |
C09 |
N08 |
H10 |
202.8 |
146.3 |
| C12 |
C09 |
C10 |
H11 |
180.9 |
180.3 |
| C14 |
C11 |
C10 |
H11 |
179.3 |
180.0 |
| C03 |
C02 |
O01 |
N08 |
179.6 |
180.3 |
| O01 |
C02 |
N08 |
H10 |
178.2 |
174.8 |
| O01 |
C02 |
C03 |
C07 |
73.0 |
99.9 |
| O01 |
C02 |
C03 |
H1 |
191.0 |
222.3 |
| C05 |
N04 |
C03 |
C07 |
348.1 |
39.5 |
| C05 |
N04 |
C03 |
H1 |
231.3 |
280.7 |
| C06 |
C05 |
N04 |
H2 |
146.4 |
80.1 |
| C03 |
C07 |
C06 |
C05 |
23.3 |
360.0 |
| C07 |
C06 |
C05 |
H6 |
240.8 |
241.1 |
| C07 |
C06 |
C05 |
H7 |
119.2 |
118.9 |
| C05 |
C06 |
C07 |
H8 |
263.9 |
241.1 |
| C05 |
C06 |
C07 |
H9 |
142.7 |
118.9 |
| H4 |
C05 |
C06 |
H5 |
121.1 |
122.4 |
| H6 |
C06 |
C05 |
H7 |
238.4 |
237.8 |
| N04 |
C03 |
C02 |
N08 |
131.4 |
165.1 |
| C02 |
C03 |
N04 |
C07 |
122.8 |
118.8 |
| C02 |
C03 |
N04 |
H1 |
239.6 |
237.6 |
| N04 |
C03 |
C07 |
C06 |
352.5 |
336.2 |
| C07 |
C03 |
N04 |
H1 |
116.7 |
118.8 |
| N04 |
C03 |
C07 |
H8 |
111.9 |
95.0 |
| N04 |
C03 |
C07 |
H9 |
233.1 |
217.2 |
| C02 |
N08 |
C09 |
H10 |
180.0 |
180.0 |
| C10 |
C09 |
N08 |
H10 |
24.1 |
326.6 |
| C11 |
C10 |
C09 |
H11 |
180.0 |
180.1 |
| O01 |
C02 |
N08 |
C03 |
179.6 |
180.3 |
| C09 |
N08 |
C02 |
H10 |
180.0 |
180.0 |
| N08 |
C02 |
C03 |
C07 |
252.7 |
280.3 |
| N08 |
C02 |
C03 |
H1 |
10.6 |
42.6 |
| O01 |
C02 |
C03 |
N08 |
180.3 |
179.7 |
| N04 |
C03 |
C02 |
C07 |
238.7 |
244.8 |
| N04 |
C03 |
C02 |
H1 |
120.8 |
122.5 |
| C03 |
C02 |
N08 |
H10 |
358.5 |
354.5 |
| C02 |
C03 |
C07 |
C06 |
227.2 |
217.4 |
| C07 |
C03 |
C02 |
H1 |
242.1 |
237.6 |
| C02 |
C03 |
C07 |
H8 |
346.6 |
336.3 |
| C02 |
C03 |
C07 |
H9 |
107.8 |
98.5 |
| C09 |
C10 |
C11 |
H11 |
180.0 |
179.9 |
| C05 |
C06 |
C07 |
C03 |
23.3 |
360.0 |
| N04 |
C03 |
C07 |
H1 |
243.0 |
241.1 |
| C07 |
C03 |
C02 |
N08 |
252.7 |
280.3 |
| C02 |
C03 |
C07 |
H1 |
117.7 |
122.4 |
| C03 |
C07 |
C06 |
H6 |
264.1 |
241.1 |
| C03 |
C07 |
C06 |
H7 |
142.5 |
118.9 |
| C06 |
C07 |
C03 |
H8 |
240.6 |
241.1 |
| C06 |
C07 |
C03 |
H9 |
119.4 |
119.0 |
| H8 |
C07 |
C03 |
H9 |
238.8 |
237.8 |
| C07 |
C06 |
C05 |
H4 |
209.4 |
265.1 |
| C07 |
C06 |
C05 |
H5 |
88.3 |
142.7 |
| C05 |
C06 |
C07 |
H6 |
119.2 |
118.9 |
| C05 |
C06 |
C07 |
H7 |
240.8 |
241.1 |
| C06 |
C07 |
C03 |
H1 |
109.5 |
95.0 |
| C03 |
C07 |
C06 |
H8 |
119.4 |
118.9 |
| C03 |
C07 |
C06 |
H9 |
240.6 |
241.1 |
| H6 |
C06 |
C07 |
H7 |
121.5 |
122.2 |
| H8 |
C07 |
C06 |
H9 |
121.2 |
122.2 |
| N04 |
C03 |
H1 |
C07 |
116.3 |
115.2 |
| H1 |
C03 |
C02 |
N08 |
10.6 |
42.6 |
| C02 |
C03 |
H1 |
C07 |
240.7 |
237.6 |
| H1 |
C03 |
C07 |
C06 |
109.5 |
95.0 |
| H1 |
C03 |
C07 |
H8 |
228.8 |
213.9 |
| H1 |
C03 |
C07 |
H9 |
350.1 |
336.1 |
| H2 |
N04 |
C03 |
C07 |
228.4 |
279.9 |
| H2 |
N04 |
C03 |
H1 |
111.7 |
161.1 |
| H4 |
C05 |
N04 |
H2 |
265.8 |
198.9 |
| H4 |
C05 |
C06 |
C07 |
209.4 |
265.1 |
| C06 |
C05 |
H4 |
H5 |
238.4 |
237.6 |
| H4 |
C05 |
C06 |
H6 |
328.6 |
23.9 |
| H4 |
C05 |
C06 |
H7 |
90.2 |
146.1 |
| H5 |
C05 |
N04 |
H2 |
26.9 |
321.3 |
| H5 |
C05 |
C06 |
C07 |
88.3 |
142.7 |
| C06 |
C05 |
H5 |
H4 |
121.6 |
122.4 |
| H5 |
C05 |
C06 |
H6 |
207.5 |
261.5 |
| H5 |
C05 |
C06 |
H7 |
329.1 |
23.7 |
| C05 |
C06 |
H6 |
C07 |
244.5 |
244.4 |
| H6 |
C06 |
C05 |
H4 |
328.6 |
23.9 |
| H6 |
C06 |
C05 |
H5 |
207.5 |
261.5 |
| C05 |
C06 |
H6 |
H7 |
122.3 |
122.2 |
| C07 |
C06 |
H6 |
H7 |
237.8 |
237.8 |
| H6 |
C06 |
C07 |
H8 |
144.7 |
122.2 |
| H6 |
C06 |
C07 |
H9 |
23.4 |
360.0 |
| C05 |
C06 |
H7 |
C07 |
115.5 |
115.6 |
| H7 |
C06 |
C05 |
H4 |
90.2 |
146.1 |
| H7 |
C06 |
C05 |
H5 |
329.1 |
23.7 |
| C05 |
C06 |
H7 |
H6 |
237.7 |
237.8 |
| C07 |
C06 |
H7 |
H6 |
122.2 |
122.1 |
| H7 |
C06 |
C07 |
H8 |
23.1 |
0.0 |
| H7 |
C06 |
C07 |
H9 |
261.9 |
237.8 |
| C03 |
C07 |
H8 |
C06 |
243.6 |
244.4 |
| H8 |
C07 |
C03 |
H1 |
228.8 |
213.9 |
| C03 |
C07 |
H8 |
H9 |
121.8 |
122.1 |
| H8 |
C07 |
C06 |
H6 |
144.7 |
122.2 |
| H8 |
C07 |
C06 |
H7 |
23.1 |
0.0 |
| C06 |
C07 |
H8 |
H9 |
238.2 |
237.7 |
| C03 |
C07 |
H9 |
C06 |
116.4 |
115.7 |
| H9 |
C07 |
C03 |
H1 |
350.1 |
336.1 |
| C03 |
C07 |
H9 |
H8 |
238.2 |
237.9 |
| H9 |
C07 |
C06 |
H6 |
23.4 |
360.0 |
| H9 |
C07 |
C06 |
H7 |
261.9 |
237.8 |
| C06 |
C07 |
H9 |
H8 |
121.8 |
122.2 |
| H12 |
C11 |
C10 |
H11 |
359.3 |
0.0 |
| C18 |
C17 |
H15 |
H16 |
119.0 |
240.0 |
| C18 |
C17 |
H16 |
H15 |
241.0 |
120.0 |
| H17 |
C19 |
C18 |
C26 |
179.7 |
180.0 |
| H18 |
N20 |
C19 |
H17 |
0.3 |
359.9 |
| H18 |
N20 |
C21 |
C26 |
179.9 |
180.1 |
| H19 |
C22 |
C21 |
C26 |
180.1 |
180.0 |
| H19 |
C22 |
C23 |
C24 |
180.1 |
180.0 |
| H19 |
C22 |
C23 |
H20 |
0.1 |
360.0 |
| C22 |
C23 |
H20 |
C24 |
180.0 |
180.1 |
| H20 |
C23 |
C22 |
H19 |
0.1 |
360.0 |
| H20 |
C23 |
C24 |
C25 |
179.9 |
180.1 |
| H20 |
C23 |
C24 |
H21 |
359.8 |
0.0 |
| C23 |
C24 |
H21 |
C25 |
180.0 |
180.0 |
| H21 |
C24 |
C23 |
H20 |
359.8 |
0.0 |
| H21 |
C24 |
C25 |
H22 |
0.1 |
0.0 |
| H22 |
C25 |
C24 |
H21 |
0.1 |
0.0 |