PDB Chemical Component 0QI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0QI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.239	1.213
C1	C2	1.540	1.507
C2	CH	1.531	1.529
C2	C3	1.535	1.531
C2	H2	1.100	1.089
CH	S	1.819	1.814
CH	HH1	1.100	1.090
CH	HH2	1.100	1.090
S	HS	1.300	1.346
C3	C4	1.541	1.530
C3	H31	1.100	1.090
C3	H32	1.100	1.090
C4	CM	1.533	1.530
C4	C5	1.533	1.530
C4	H4	1.100	1.090
CM	HM1	1.099	1.090
CM	HM2	1.100	1.090
CM	HM3	1.100	1.090
C5	H51	1.100	1.090
C5	H52	1.100	1.090
C5	H53	1.100	1.089
N	CA	1.453	1.465
N	H	1.001	0.970
CA	C	1.537	1.507
CA	CB	1.539	1.531
CA	HA	1.100	1.089
C	O	1.241	1.208
C	OXT	1.246	1.343
CB	CG	1.515	1.507
CB	HB2	1.100	1.090
CB	HB3	1.100	1.091
CG	CD1	1.389	1.382
CG	CD2	1.396	1.383
CD1	CE1	1.378	1.382
CD1	HD1	1.080	1.080
CD2	CE2	1.375	1.382
CD2	HD2	1.080	1.080
CE1	CZ	1.381	1.387
CE1	HE1	1.080	1.081
CE2	CZ	1.389	1.386
CE2	HE2	1.080	1.080
CZ	OH	1.384	1.360
OXT	HXT	0.950	0.968
C6	HC1	1.100	1.090
C6	HC2	1.101	1.089
C6	HC3	1.101	1.090
C1	N	1.326	1.348
OH	C6	1.429	1.428

Bond Angles for 0QI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	122.1	120.1
O1	C1	N	123.0	120.0
C1	C2	CH	112.1	109.5
C1	C2	C3	109.6	109.4
C1	C2	H2	107.3	109.5
C2	C1	N	114.8	120.0
CH	C2	C3	108.4	109.5
CH	C2	H2	108.5	109.5
C2	CH	S	115.2	109.5
C2	CH	HH1	107.6	109.5
C2	CH	HH2	107.6	109.5
C3	C2	H2	111.0	109.5
C2	C3	C4	118.1	109.5
C2	C3	H31	106.7	109.5
C2	C3	H32	106.7	109.5
S	CH	HH1	107.6	109.5
S	CH	HH2	107.6	109.5
CH	S	HS	102.0	103.0
HH1	CH	HH2	111.2	109.4
C4	C3	H31	106.7	109.5
C4	C3	H32	106.7	109.5
C3	C4	CM	109.8	109.5
C3	C4	C5	111.2	109.5
C3	C4	H4	108.5	109.4
H31	C3	H32	112.1	109.5
CM	C4	C5	110.8	109.5
CM	C4	H4	108.9	109.5
C4	CM	HM1	109.5	109.5
C4	CM	HM2	109.5	109.5
C4	CM	HM3	109.5	109.5
C5	C4	H4	107.5	109.4
C4	C5	H51	109.5	109.4
C4	C5	H52	109.5	109.5
C4	C5	H53	109.5	109.4
HM1	CM	HM2	109.5	109.4
HM1	CM	HM3	109.5	109.5
HM2	CM	HM3	109.5	109.5
H51	C5	H52	109.5	109.5
H51	C5	H53	109.5	109.5
H52	C5	H53	109.5	109.5
CA	N	H	118.5	120.0
N	CA	C	109.9	109.4
N	CA	CB	110.2	109.5
N	CA	HA	109.9	109.5
C1	N	CA	123.1	120.0
C1	N	H	118.5	120.0
C	CA	CB	112.8	109.4
C	CA	HA	107.2	109.5
CA	C	O	120.5	120.0
CA	C	OXT	117.4	120.0
CB	CA	HA	106.8	109.5
CA	CB	CG	116.5	109.4
CA	CB	HB2	107.2	109.5
CA	CB	HB3	107.2	109.4
O	C	OXT	122.0	120.0
C	OXT	HXT	109.5	116.9
CG	CB	HB2	107.2	109.5
CG	CB	HB3	107.2	109.5
CB	CG	CD1	121.3	119.9
CB	CG	CD2	120.6	119.9
HB2	CB	HB3	111.7	109.5
CD1	CG	CD2	118.1	120.1
CG	CD1	CE1	121.2	120.1
CG	CD1	HD1	119.4	120.0
CG	CD2	CE2	121.2	120.0
CG	CD2	HD2	119.4	120.0
CE1	CD1	HD1	119.4	120.0
CD1	CE1	CZ	119.7	119.9
CD1	CE1	HE1	120.2	120.0
CE2	CD2	HD2	119.4	120.0
CD2	CE2	CZ	119.5	120.0
CD2	CE2	HE2	120.3	120.0
CZ	CE1	HE1	120.1	120.1
CE1	CZ	CE2	120.3	119.9
CE1	CZ	OH	118.5	120.0
CZ	CE2	HE2	120.3	120.0
CE2	CZ	OH	121.2	120.1
CZ	OH	C6	134.0	117.0
HC1	C6	HC2	109.4	109.4
HC1	C6	HC3	109.5	109.5
OH	C6	HC1	109.5	109.5
HC2	C6	HC3	109.5	109.4
OH	C6	HC2	109.5	109.5
OH	C6	HC3	109.5	109.5

Torsion Angles for 0QI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	CH	319.7	240.0
O1	C1	C2	C3	80.2	360.0
O1	C1	C2	H2	200.8	120.0
C2	C1	O1	N	183.1	180.3
O1	C1	N	CA	1.7	0.1
O1	C1	N	H	181.7	180.0
O1	C1	C2	N	177.1	179.7
CH	C2	C1	C3	239.6	240.0
CH	C2	C1	H2	119.0	120.1
C1	C2	CH	S	283.3	198.6
C1	C2	CH	HH1	43.3	318.6
C1	C2	CH	HH2	163.3	78.5
C3	C2	C1	H2	239.4	240.0
C1	C2	C3	C4	44.2	174.2
C1	C2	C3	H31	164.2	294.2
C1	C2	C3	H32	284.2	54.2
C2	C1	N	CA	178.8	179.8
C2	C1	N	H	358.8	359.6
C1	C2	CH	C3	121.1	120.0
C1	C2	CH	H2	241.7	240.0
CH	C2	C1	N	142.6	60.3
C3	C2	CH	H2	120.6	120.0
CH	C2	C3	C4	166.8	294.2
CH	C2	C3	H31	286.8	54.2
CH	C2	C3	H32	46.8	174.2
S	CH	C2	HH1	240.0	240.0
S	CH	C2	HH2	120.0	120.1
C2	CH	S	HS	180.0	179.9
HH1	CH	C2	HH2	240.0	240.0
C1	C2	C3	CH	237.4	240.0
C1	C2	C3	H2	118.3	120.0
C3	C2	C1	N	263.1	180.3
CH	C2	C3	H2	241.0	240.0
C3	C2	CH	S	162.2	78.7
C3	C2	CH	HH1	282.2	198.6
C3	C2	CH	HH2	42.2	318.6
C4	C3	C2	H31	240.0	240.0
C4	C3	C2	H32	120.0	120.0
C2	C3	C4	CM	188.1	176.9
C2	C3	C4	C5	65.1	296.9
C2	C3	C4	H4	307.1	56.9
H31	C3	C2	H32	240.0	240.0
C1	C2	H2	CH	121.3	120.0
C1	C2	H2	C3	240.3	240.1
H2	C2	C1	N	23.7	300.3
CH	C2	H2	C3	119.0	120.0
H2	C2	CH	S	41.6	318.6
H2	C2	CH	HH1	161.6	78.6
H2	C2	CH	HH2	281.6	198.6
H2	C2	C3	C4	285.9	54.2
H2	C2	C3	H31	45.9	174.2
H2	C2	C3	H32	165.8	294.2
S	CH	C2	C3	162.2	78.7
S	CH	C2	H2	41.6	318.6
C2	CH	S	HH1	120.0	120.0
C2	CH	S	HH2	240.0	239.9
HH1	CH	S	HH2	120.0	119.9
HH1	CH	C2	C3	282.2	198.6
HH1	CH	C2	H2	161.6	78.6
C2	CH	HH1	S	235.3	240.0
C2	CH	HH1	HH2	117.7	120.0
S	CH	HH1	HH2	242.3	240.0
HH1	CH	S	HS	60.0	59.9
HH2	CH	C2	C3	42.2	318.6
HH2	CH	C2	H2	281.6	198.6
C2	CH	HH2	S	124.7	120.0
C2	CH	HH2	HH1	242.4	240.0
S	CH	HH2	HH1	117.7	120.0
HH2	CH	S	HS	300.0	300.0
HS	S	CH	HH1	60.0	59.9
HS	S	CH	HH2	300.0	300.0
C4	C3	C2	H2	285.9	54.2
C2	C3	C4	H31	120.0	120.0
C2	C3	C4	H32	240.0	240.0
H31	C3	C4	H32	120.0	120.0
CM	C4	C3	C5	123.1	239.9
CM	C4	C3	H4	241.0	120.0
C3	C4	CM	HM1	180.0	60.1
C3	C4	CM	HM2	300.0	180.0
C3	C4	CM	HM3	60.0	300.0
C5	C4	C3	H4	118.0	240.1
C3	C4	C5	H51	180.0	300.0
C3	C4	C5	H52	300.0	59.9
C3	C4	C5	H53	60.0	180.0
H31	C3	C2	H2	45.9	174.2
C2	C3	H31	C4	232.9	240.0
C2	C3	H31	H32	116.4	120.0
C4	C3	H31	H32	243.5	240.0
H31	C3	C4	CM	68.1	56.9
H31	C3	C4	C5	305.1	176.9
H31	C3	C4	H4	187.1	296.9
H32	C3	C2	H2	165.8	294.2
C2	C3	H32	C4	127.1	120.0
C2	C3	H32	H31	243.6	240.0
C4	C3	H32	H31	116.5	120.0
H32	C3	C4	CM	308.1	296.9
H32	C3	C4	C5	185.1	56.9
H32	C3	C4	H4	67.1	176.9
CM	C4	C3	H31	68.1	56.9
CM	C4	C3	H32	308.1	296.9
C3	C4	CM	C5	236.7	120.0
C3	C4	CM	H4	118.7	240.0
C5	C4	CM	H4	242.0	120.0
CM	C4	C5	H51	57.5	60.0
CM	C4	C5	H52	177.5	180.0
CM	C4	C5	H53	297.5	300.0
HM1	CM	C4	HM2	240.0	240.1
HM1	CM	C4	HM3	120.0	120.1
HM2	CM	C4	HM3	240.0	240.0
C5	C4	C3	H31	305.1	176.9
C5	C4	C3	H32	185.1	56.9
C3	C4	C5	CM	122.5	240.0
C3	C4	C5	H4	241.4	120.0
CM	C4	C5	H4	118.9	240.0
C5	C4	CM	HM1	303.3	300.0
C5	C4	CM	HM2	63.3	60.0
C5	C4	CM	HM3	183.3	179.9
H51	C5	C4	H52	240.0	240.1
H51	C5	C4	H53	120.0	120.0
H52	C5	C4	H53	240.0	239.9
H4	C4	C3	H31	187.1	296.9
H4	C4	C3	H32	67.1	176.9
C3	C4	H4	CM	240.5	120.0
C3	C4	H4	C5	120.3	240.0
CM	C4	H4	C5	239.9	120.0
H4	C4	CM	HM1	61.3	180.0
H4	C4	CM	HM2	181.3	300.0
H4	C4	CM	HM3	301.3	60.0
H4	C4	C5	H51	298.6	180.0
H4	C4	C5	H52	58.6	300.0
H4	C4	C5	H53	178.6	60.1
HM1	CM	C4	C5	303.3	300.0
HM1	CM	C4	H4	61.3	180.0
C4	CM	HM1	HM2	120.0	120.0
C4	CM	HM1	HM3	240.0	239.9
HM2	CM	HM1	HM3	120.0	120.0
HM2	CM	C4	C5	63.3	60.0
HM2	CM	C4	H4	181.3	300.0
C4	CM	HM2	HM1	240.0	240.0
C4	CM	HM2	HM3	120.0	120.0
HM1	CM	HM2	HM3	240.0	240.0
HM3	CM	C4	C5	183.3	179.9
HM3	CM	C4	H4	301.3	60.0
C4	CM	HM3	HM1	120.0	120.0
C4	CM	HM3	HM2	240.0	240.0
HM1	CM	HM3	HM2	120.0	120.0
H51	C5	C4	H4	298.6	180.0
C4	C5	H51	H52	120.0	119.9
C4	C5	H51	H53	240.0	240.0
H52	C5	H51	H53	120.0	120.1
H52	C5	C4	H4	58.6	300.0
C4	C5	H52	H51	240.0	240.1
C4	C5	H52	H53	120.0	120.0
H51	C5	H52	H53	240.0	239.9
H53	C5	C4	H4	178.6	60.1
C4	C5	H53	H51	120.0	119.9
C4	C5	H53	H52	240.0	240.0
H51	C5	H53	H52	120.0	120.1
C1	N	CA	H	180.0	179.9
C	CA	N	CB	124.9	119.9
C	CA	N	HA	242.3	240.0
N	CA	C	O	158.5	0.1
N	CA	C	OXT	343.1	180.0
CB	CA	N	HA	117.5	120.1
N	CA	CB	CG	51.9	294.9
N	CA	CB	HB2	171.9	54.9
N	CA	CB	HB3	291.9	175.0
H	N	CA	C	7.1	95.0
H	N	CA	CB	242.2	335.1
H	N	CA	HA	124.8	215.0
C1	N	H	CA	180.0	180.1
C	CA	N	H	7.1	95.0
N	CA	C	CB	236.6	240.0
N	CA	C	HA	119.4	120.0
C1	N	CA	C	187.1	274.9
CB	CA	C	HA	242.7	240.0
C	CA	CB	CG	288.7	175.0
C	CA	CB	HB2	48.7	295.0
C	CA	CB	HB3	168.7	55.1
O	C	CA	OXT	175.4	180.0
CA	C	OXT	HXT	175.3	180.0
CB	CA	N	H	242.2	335.1
N	CA	CB	C	123.2	119.9
N	CA	CB	HA	240.6	239.9
C1	N	CA	CB	62.2	155.0
C	CA	CB	HA	117.5	120.0
CB	CA	C	O	281.9	120.0
CB	CA	C	OXT	106.5	300.0
CG	CB	CA	HB2	240.0	240.0
CG	CB	CA	HB3	120.0	120.0
CA	CB	CG	CD1	357.5	90.0
CA	CB	CG	CD2	175.9	269.8
HB2	CB	CA	HB3	240.0	239.9
HA	CA	N	H	124.8	215.0
N	CA	HA	C	240.7	240.0
N	CA	HA	CB	119.6	120.0
C1	N	CA	HA	304.8	34.9
C	CA	HA	CB	238.9	240.0
HA	CA	C	O	39.1	240.0
HA	CA	C	OXT	223.7	60.0
HA	CA	CB	CG	171.2	55.0
HA	CA	CB	HB2	291.2	175.0
HA	CA	CB	HB3	51.2	295.1
O	C	CA	CB	281.9	120.0
O	C	CA	HA	39.1	240.0
CA	C	O	OXT	184.8	180.0
O	C	OXT	HXT	0.0	0.0
OXT	C	CA	CB	106.5	300.0
OXT	C	CA	HA	223.7	60.0
CA	C	OXT	O	175.3	180.0
CG	CB	CA	HA	171.2	55.0
CA	CB	CG	HB2	120.0	120.0
CA	CB	CG	HB3	240.0	240.1
HB2	CB	CG	HB3	120.0	120.0
CD1	CG	CB	CD2	181.6	180.3
CB	CG	CD1	CE1	178.1	180.0
CB	CG	CD1	HD1	358.1	360.0
CB	CG	CD2	CE2	182.0	180.0
CB	CG	CD2	HD2	2.0	360.0
HB2	CB	CA	HA	291.2	175.0
CA	CB	HB2	CG	234.2	240.0
CA	CB	HB2	HB3	117.1	120.0
CG	CB	HB2	HB3	242.9	240.0
HB2	CB	CG	CD1	237.5	330.0
HB2	CB	CG	CD2	55.9	149.7
HB3	CB	CA	HA	51.2	295.1
CA	CB	HB3	CG	125.8	119.9
CA	CB	HB3	HB2	242.9	239.9
CG	CB	HB3	HB2	117.1	120.0
HB3	CB	CG	CD1	117.5	210.0
HB3	CB	CG	CD2	295.9	29.7
CD1	CG	CB	HB2	237.5	330.0
CD1	CG	CB	HB3	117.5	210.0
CB	CG	CD1	CD2	178.4	179.7
CD1	CG	CD2	CE2	0.4	359.8
CD1	CG	CD2	HD2	180.4	179.7
CE1	CD1	CG	HD1	180.0	180.0
CG	CD1	CE1	CZ	0.2	0.0
CG	CD1	CE1	HE1	180.2	180.0
CD2	CG	CB	HB2	55.9	149.7
CD2	CG	CB	HB3	295.9	29.7
CB	CG	CD2	CD1	181.6	180.3
CD2	CG	CD1	CE1	359.7	0.2
CD2	CG	CD1	HD1	179.7	180.2
CE2	CD2	CG	HD2	180.0	180.1
CG	CD2	CE2	CZ	359.6	359.9
CG	CD2	CE2	HE2	179.6	180.0
CE1	CD1	CG	CD2	359.7	0.2
CG	CD1	CE1	HD1	180.0	180.0
CZ	CE1	CD1	HE1	180.0	180.0
CD1	CE1	CZ	CE2	359.9	359.7
CD1	CE1	CZ	OH	179.9	180.0
HD1	CD1	CG	CD2	179.7	180.2
CG	CD1	HD1	CE1	180.0	180.0
HD1	CD1	CE1	CZ	180.2	180.0
HD1	CD1	CE1	HE1	0.2	0.0
CG	CD2	CE2	HD2	180.0	179.9
CE1	CZ	CE2	CD2	0.2	0.3
CZ	CE2	CD2	HE2	180.0	180.0
CD2	CE2	CZ	OH	180.2	180.1
CG	CD2	HD2	CE2	180.0	180.1
HD2	CD2	CE2	CZ	179.6	180.0
HD2	CD2	CE2	HE2	359.6	0.0
CZ	CE1	CD1	HD1	180.2	180.0
CD1	CE1	CZ	HE1	180.0	180.0
CD2	CE2	CZ	CE1	0.2	0.3
CE1	CZ	CE2	HE2	180.2	180.3
CE2	CZ	CE1	OH	180.0	179.7
CE1	CZ	OH	C6	66.2	180.0
HE1	CE1	CD1	HD1	0.2	0.0
CD1	CE1	HE1	CZ	180.0	180.0
HE1	CE1	CZ	CE2	179.8	179.7
HE1	CE1	CZ	OH	359.8	360.0
CZ	CE2	CD2	HD2	179.6	180.0
CD2	CE2	CZ	HE2	180.0	180.0
CE2	CZ	CE1	HE1	179.8	179.7
CE1	CZ	CE2	OH	180.0	180.3
CE2	CZ	OH	C6	246.2	0.3
HE2	CE2	CD2	HD2	359.6	0.0
CD2	CE2	HE2	CZ	180.0	180.0
HE2	CE2	CZ	OH	0.2	0.0
OH	CZ	CE1	HE1	359.8	360.0
CE1	CZ	OH	CE2	180.0	179.7
OH	CZ	CE2	HE2	0.2	0.0
CZ	OH	C6	HC1	180.0	300.0
CZ	OH	C6	HC2	300.0	60.0
CZ	OH	C6	HC3	60.0	180.0
HC2	C6	HC1	HC3	120.0	119.9
OH	C6	HC1	HC2	120.0	120.1
OH	C6	HC1	HC3	240.0	240.0
HC1	C6	HC2	HC3	240.0	240.1
OH	C6	HC2	HC1	240.0	239.9
OH	C6	HC2	HC3	120.0	120.0
HC1	C6	HC3	HC2	120.0	119.9
OH	C6	HC3	HC1	120.0	120.0
OH	C6	HC3	HC2	240.0	240.0
O1	C1	N	C2	182.9	180.3
N	C1	C2	CH	142.6	60.3
N	C1	C2	C3	263.1	180.3
N	C1	C2	H2	23.7	300.3
CA	N	C1	H	180.0	180.1
HC1	C6	OH	HC2	240.0	240.0
HC1	C6	OH	HC3	120.0	120.0
HC2	C6	OH	HC3	240.0	240.0