PDB Chemical Component 0Q5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 0Q5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C12 C11 1.476 1.530
C11 C10 1.511 1.530
C10 C9 1.514 1.530
C17 C16 1.383 1.382
C17 C18 1.392 1.382
C16 C15 1.385 1.383
C18 C13 1.393 1.388
C32 C31 1.384 1.379
C32 C33 1.380 1.382
C15 C14 1.387 1.381
C26 SI1 1.887 1.863
C9 C8 1.495 1.507
C31 C30 1.396 1.390
C13 C14 1.399 1.388
C13 N1 1.429 1.402
C33 C34 1.389 1.380
C8 N1 1.416 1.349
C8 C6 1.374 1.377
N1 N 1.385 1.399
C30 C35 1.503 1.505
C30 C29 1.415 1.377
C25 SI1 1.887 1.863
C35 C36 1.507 1.528
SI1 C24 1.890 1.863
SI1 C22 1.894 1.862
C34 C29 1.392 1.388
C4 C3 1.387 1.376
C4 C5 1.396 1.395
C6 C5 1.471 1.480
C6 C7 1.433 1.411
N C7 1.313 1.305
C29 C28 1.524 1.503
C3 C2 1.395 1.399
C5 C 1.410 1.409
C7 C19 1.495 1.507
C21 C22 1.527 1.530
C21 S 1.729 1.815
O C19 1.418 1.429
C36 N3 1.455 1.472
C2 C20 1.494 1.477
C2 C1 1.390 1.394
C C1 1.402 1.391
C C27 1.510 1.475
C28 N3 1.473 1.467
N3 C27 1.350 1.348
N2 C20 1.385 1.347
N2 S 1.639 1.656
C20 O1 1.235 1.217
C27 O4 1.215 1.216
O2 S 1.432 1.420
S O3 1.430 1.421
C36 H1 1.100 1.090
C36 H2 1.100 1.090
C35 H3 1.100 1.091
C35 H4 1.100 1.090
C31 H5 1.079 1.079
C32 H6 1.079 1.080
C33 H7 1.080 1.080
C34 H8 1.080 1.080
C28 H9 1.100 1.090
C28 H10 1.100 1.090
C9 H11 1.100 1.090
C9 H12 1.100 1.091
C10 H13 1.100 1.090
C10 H14 1.100 1.091
C11 H15 1.100 1.090
C11 H16 1.100 1.090
C12 H17 1.100 1.090
C12 H18 1.100 1.090
C12 H19 1.100 1.091
C18 H20 1.080 1.080
C17 H21 1.080 1.080
C16 H22 1.080 1.080
C15 H23 1.080 1.080
C14 H24 1.080 1.081
C19 H25 1.100 1.089
C19 H26 1.100 1.090
O H27 0.950 0.967
C4 H28 1.080 1.080
C3 H29 1.080 1.080
C1 H30 1.080 1.080
N2 H31 1.000 0.971
C21 H32 1.100 1.091
C21 H33 1.100 1.090
C22 H34 1.101 1.089
C22 H35 1.100 1.091
C26 H36 1.100 1.090
C26 H37 1.100 1.091
C26 H38 1.100 1.090
C25 H39 1.100 1.090
C25 H40 1.100 1.091
C25 H41 1.100 1.090
C24 H42 1.100 1.090
C24 H43 1.100 1.090
C24 H44 1.100 1.090

Bond Angles for 0Q5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C12 C11 H15 108.5 109.5
C12 C11 H16 108.5 109.5
C11 C10 H13 109.1 109.5
C11 C10 H14 109.1 109.5
C10 C9 H11 107.7 109.5
C10 C9 H12 107.7 109.5
C17 C16 C15 120.0 120.1
C16 C17 H21 119.8 120.0
C17 C16 H22 120.0 120.0
C17 C18 H20 120.1 120.0
C16 C15 C14 120.4 120.0
C15 C16 H22 120.0 119.9
C16 C15 H23 119.8 120.0
C18 C13 C14 119.9 119.9
C32 C31 H5 119.6 119.7
C32 C33 C34 120.1 119.7
C33 C32 H6 120.0 120.1
C32 C33 H7 119.9 120.2
C13 C14 C15 119.7 120.0
C14 C15 H23 119.8 120.0
C15 C14 H24 120.2 120.0
C26 SI1 C24 109.6 109.4
C9 C8 N1 125.3 126.3
C31 C30 C29 119.3 119.5
C13 C14 H24 120.2 120.0
C13 N1 N 119.0 125.8
C33 C34 C29 120.9 120.5
C34 C33 H7 119.9 120.1
C33 C34 H8 119.6 119.7
C8 N1 N 109.8 108.3
C8 C6 C7 106.2 107.3
N1 N C7 106.7 108.8
C30 C35 H3 109.2 109.2
C30 C35 H4 109.2 109.2
C30 C29 C34 118.9 119.8
C30 C29 C28 121.2 122.3
C25 SI1 C24 109.3 109.5
C35 C36 H1 109.7 109.7
C35 C36 H2 109.7 109.8
SI1 C24 H42 109.5 109.5
SI1 C24 H43 109.4 109.4
SI1 C24 H44 109.5 109.4
SI1 C22 H34 108.2 109.5
SI1 C22 H35 108.2 109.4
C34 C29 C28 119.9 117.8
C29 C34 H8 119.5 119.8
C4 C3 C2 120.5 120.3
C3 C4 H28 119.6 119.9
C4 C3 H29 119.7 119.8
C6 C7 N 111.2 108.1
C6 C7 C19 127.1 125.9
N C7 C19 121.7 125.9
C29 C28 H9 109.3 109.5
C29 C28 H10 109.3 109.5
C3 C2 C20 121.8 119.9
C3 C2 C1 119.1 120.1
C2 C3 H29 119.7 119.9
C5 C C1 119.3 119.7
C7 C19 H25 111.0 109.5
C7 C19 H26 111.0 109.5
C22 C21 H32 109.3 109.5
C22 C21 H33 109.3 109.5
C21 C22 H34 108.3 109.5
C21 C22 H35 108.3 109.4
O C19 H25 111.0 109.5
O C19 H26 111.0 109.4
C1 C2 C20 119.0 119.9
C2 C20 O1 122.1 120.0
C C1 C2 121.1 119.8
C2 C1 H30 119.5 120.1
C C1 H30 119.5 120.1
N2 S O3 108.6 104.3
S N2 H31 120.5 120.0
O2 S O3 119.3 121.1
H1 C36 H2 109.5 109.8
H3 C35 H4 109.5 109.2
H9 C28 H10 109.5 109.4
H11 C9 H12 109.5 109.5
H13 C10 H14 109.5 109.5
H15 C11 H16 109.5 109.5
H17 C12 H18 109.5 109.5
H17 C12 H19 109.5 109.4
H18 C12 H19 109.5 109.4
H25 C19 H26 109.4 109.5
H32 C21 H33 109.5 109.4
H34 C22 H35 109.5 109.5
H36 C26 H37 109.5 109.4
H36 C26 H38 109.5 109.5
H37 C26 H38 109.5 109.4
H39 C25 H40 109.5 109.5
H39 C25 H41 109.5 109.5
H40 C25 H41 109.5 109.4
H42 C24 H43 109.5 109.5
H42 C24 H44 109.4 109.5
H43 C24 H44 109.5 109.5

Torsion Angles for 0Q5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C12 C11 C10 H13 303.9 60.0
C12 C11 C10 H14 63.4 300.0
H15 C11 C12 H16 241.2 120.0
C11 C10 C9 H11 301.7 55.1
C11 C10 C9 H12 59.7 295.1
H13 C10 C11 H14 240.5 120.0
C10 C9 C8 N1 60.2 270.2
H11 C9 C10 H12 242.0 120.0
C16 C17 C18 H20 179.9 180.1
C17 C16 C15 C14 0.7 360.0
C15 C16 C17 H22 180.0 180.0
C17 C16 C15 H23 180.7 179.9
C17 C18 C13 C14 359.4 0.0
C15 C16 C17 H21 180.0 180.0
C17 C16 C15 H22 180.0 180.0
C13 C14 C15 C16 358.6 360.0
C14 C15 C16 H23 180.0 180.1
C16 C15 C14 H24 178.6 180.3
C18 C13 C14 C15 1.3 360.0
C18 C13 C14 H24 181.3 179.7
C18 C13 N1 N 69.1 134.8
C32 C31 C30 C29 1.9 359.7
C33 C32 C31 H5 178.7 179.9
C32 C33 C34 C29 0.8 0.0
C34 C33 C32 H7 180.0 180.1
C32 C33 C34 H8 180.8 179.9
C14 C15 C16 H22 180.7 180.0
C16 C15 C14 H23 180.0 179.9
C13 C14 C15 H24 180.0 179.7
C25 SI1 C26 C24 240.1 120.0
C26 SI1 C24 H42 180.0 299.9
C26 SI1 C24 H43 300.0 60.0
C26 SI1 C24 H44 60.0 180.0
C26 SI1 C22 H34 177.6 60.0
C26 SI1 C22 H35 296.1 299.9
C9 C8 N1 N 179.3 180.0
C9 C8 C6 C7 181.1 180.3
C31 C30 C35 H3 319.5 39.5
C31 C30 C35 H4 79.3 280.2
C31 C30 C29 C34 358.8 0.7
C31 C30 C29 C28 179.2 181.2
C16 C15 C14 C13 358.6 360.0
C13 C14 C15 H23 178.6 180.0
C15 C14 C13 H24 180.0 180.3
C14 C13 N1 N 245.5 314.5
C8 N1 C13 N 170.6 179.9
C13 N1 N C7 170.9 179.6
C34 C33 C32 H6 179.9 180.3
C32 C33 C34 H7 180.0 179.9
C30 C29 C34 C33 359.8 359.5
C33 C34 C29 C28 179.4 179.0
C29 C34 C33 H8 180.0 180.1
C13 N1 C8 N 188.8 180.1
N1 C8 C6 C7 358.2 0.3
C8 N1 N C7 358.5 359.7
C8 C6 C7 N 1.0 359.5
C8 C6 C7 C19 182.8 179.7
C6 C7 N N1 0.3 0.5
N1 N C7 C19 178.7 180.2
C30 C35 C36 H1 66.3 287.9
C30 C35 C36 H2 186.6 167.1
H3 C35 C30 H4 240.3 119.3
C33 C34 C29 C30 359.8 359.5
C29 C30 C35 H3 145.3 219.5
C29 C30 C35 H4 265.1 100.2
C34 C29 C30 C28 179.5 179.5
C30 C29 C34 H8 179.9 179.6
C30 C29 C28 H9 135.8 228.4
C30 C29 C28 H10 255.6 108.5
C26 SI1 C25 C24 120.1 240.0
C25 SI1 C24 H42 300.1 180.0
C25 SI1 C24 H43 60.2 300.0
C25 SI1 C24 H44 180.2 60.0
C25 SI1 C22 H34 56.6 180.0
C25 SI1 C22 H35 175.2 60.0
H1 C36 C35 H2 239.7 120.8
C24 SI1 C22 H34 297.3 300.0
C24 SI1 C22 H35 55.9 180.0
H42 C24 SI1 H43 240.0 239.9
H42 C24 SI1 H44 120.0 119.9
H43 C24 SI1 H44 240.0 240.0
SI1 C22 C21 H32 301.1 60.0
SI1 C22 C21 H33 61.0 300.0
C21 C22 SI1 H34 239.3 120.0
C21 C22 SI1 H35 120.7 240.1
H34 C22 SI1 H35 241.4 120.0
C29 C34 C33 H7 180.8 180.1
C33 C34 C29 H8 180.0 179.9
C30 C29 C34 C28 180.5 180.5
C34 C29 C28 H9 316.3 48.9
C34 C29 C28 H10 76.1 289.0
C4 C3 C2 C20 184.7 180.0
C4 C3 C2 C1 0.2 359.9
C2 C3 C4 H29 180.0 180.0
C4 C5 C C1 359.9 0.0
C6 C5 C C1 179.9 180.1
N1 N C7 C6 0.3 0.5
N C7 C6 C19 178.2 179.8
C6 C7 C19 H25 217.5 210.0
C6 C7 C19 H26 339.4 330.0
C6 C7 N C19 181.7 180.2
N C7 C19 H25 39.5 30.3
N C7 C19 H26 161.4 150.3
C30 C29 C28 C34 179.5 179.5
C28 C29 C34 H8 359.4 359.1
H9 C28 C29 H10 240.2 119.9
C2 C3 C4 H28 179.3 180.1
C4 C3 C2 H29 180.0 180.0
C1 C2 C3 C20 175.6 180.0
C3 C2 C20 O1 203.2 180.0
C C1 C2 C3 0.3 0.1
C3 C2 C1 H30 180.3 180.3
C5 C C1 C2 359.7 359.9
C5 C C1 H30 179.7 179.7
C6 C7 C19 N 178.0 179.7
O C19 C7 H25 241.0 240.0
O C19 C7 H26 119.0 119.9
H25 C19 C7 H26 238.1 240.0
SI1 C22 C21 H34 120.7 239.9
SI1 C22 C21 H35 239.3 119.9
H32 C21 C22 H33 240.2 120.0
H34 C22 C21 H35 118.6 240.0
C21 S N2 H31 251.8 244.9
C7 C19 O H25 119.0 120.0
C7 C19 O H26 240.9 240.0
H25 C19 O H26 121.9 120.0
C3 C2 C20 C1 175.6 180.0
C20 C2 C3 H29 4.6 360.0
C C1 C2 C20 176.0 180.1
C20 C2 C1 H30 356.0 0.3
C3 C2 C1 C20 184.3 180.0
C1 C2 C3 H29 180.2 179.9
C1 C2 C20 O1 27.6 0.0
C C1 C2 H30 180.0 179.8
C3 C2 C1 C 0.3 0.1
C2 C1 C H30 180.0 180.2
O2 S N2 O3 229.9 232.1
N2 S O2 O3 123.8 116.8
O2 S N2 H31 5.6 1.0
O3 S N2 H31 135.7 128.9
C35 C36 H1 H2 120.4 239.2
C35 C36 H2 H1 239.6 120.7
C30 C35 H3 H4 119.6 240.7
H3 C35 C36 H1 306.2 48.3
H3 C35 C36 H2 66.4 287.5
C30 C35 H4 H3 240.4 119.3
H4 C35 C36 H1 186.5 167.6
H4 C35 C36 H2 306.7 46.8
H5 C31 C30 C29 181.9 179.6
H6 C32 C31 H5 358.7 360.0
H6 C32 C33 C34 179.9 180.3
H6 C32 C33 H7 359.9 0.2
C32 C33 H7 C34 180.0 180.1
H7 C33 C32 H6 359.9 0.2
H7 C33 C34 C29 180.8 180.1
H7 C33 C34 H8 0.8 0.0
C33 C34 H8 C29 180.0 180.1
H8 C34 C33 H7 0.8 0.0
H8 C34 C29 C28 359.4 359.1
C29 C28 H9 H10 119.7 240.1
C29 C28 H10 H9 240.3 120.0
C10 C9 H11 H12 116.8 240.0
H11 C9 C8 N1 299.2 30.3
C10 C9 H12 H11 243.2 120.0
H12 C9 C8 N1 181.2 150.2
C11 C10 H13 H14 119.3 239.9
H13 C10 C9 H11 181.5 175.1
H13 C10 C9 H12 299.5 55.1
C11 C10 H14 H13 240.7 120.1
H14 C10 C9 H11 61.9 295.1
H14 C10 C9 H12 179.9 175.1
C12 C11 H15 H16 118.2 240.0
H15 C11 C10 H13 183.3 180.0
H15 C11 C10 H14 302.8 60.0
C12 C11 H16 H15 241.8 120.0
H16 C11 C10 H13 64.5 300.0
H16 C11 C10 H14 184.0 180.0
H17 C12 C11 H15 300.6 180.0
H17 C12 C11 H16 59.4 60.0
H18 C12 H17 H19 120.0 119.9
H18 C12 C11 H15 60.6 300.0
H18 C12 C11 H16 179.4 180.0
H17 C12 H18 H19 240.0 240.1
H19 C12 C11 H15 180.6 60.0
H19 C12 C11 H16 299.4 299.9
H17 C12 H19 H18 120.0 119.9
H20 C18 C13 C14 179.4 179.9
H21 C17 C16 C15 180.0 180.0
H21 C17 C16 H22 0.0 0.0
H21 C17 C18 H20 359.9 0.1
C17 C16 H22 C15 180.0 180.0
H22 C16 C17 H21 0.0 0.0
H22 C16 C15 C14 180.7 180.0
H22 C16 C15 H23 0.7 359.9
C16 C15 H23 C14 180.0 180.1
H23 C15 C16 H22 0.7 359.9
H23 C15 C14 H24 358.6 0.4
C13 C14 H24 C15 180.0 180.3
H24 C14 C15 H23 358.6 0.4
C7 C19 H25 H26 122.8 120.0
O C19 H25 H26 237.2 240.0
C7 C19 H26 H25 237.2 240.0
O C19 H26 H25 122.8 120.0
H27 O C19 H25 61.0 60.0
H27 O C19 H26 299.1 300.0
H28 C4 C3 C2 179.3 180.1
H28 C4 C3 H29 359.4 0.0
C4 C3 H29 C2 180.0 180.0
H29 C3 C4 H28 359.4 0.0
H29 C3 C2 C20 4.6 360.0
H29 C3 C2 C1 180.2 179.9
H30 C1 C2 C20 356.0 0.3
C C1 H30 C2 180.0 180.2
H31 N2 S O3 135.7 128.9
C22 C21 H32 H33 119.7 240.0
H32 C21 C22 H34 180.4 180.0
H32 C21 C22 H35 61.8 300.0
C22 C21 H33 H32 240.3 120.0
H33 C21 C22 H34 300.2 60.0
H33 C21 C22 H35 181.6 180.0
SI1 C22 H34 H35 117.8 240.0
H34 C22 C21 H32 180.4 180.0
H34 C22 C21 H33 300.2 60.0
C21 C22 H34 H35 242.2 120.0
SI1 C22 H35 H34 242.2 120.1
H35 C22 C21 H32 61.8 300.0
H35 C22 C21 H33 181.6 180.0
C21 C22 H35 H34 117.8 240.0
H36 C26 SI1 C24 299.9 60.1
H37 C26 H36 H38 120.0 119.9
H37 C26 SI1 C24 59.9 180.1
H36 C26 H37 H38 240.0 240.0
H38 C26 SI1 C24 179.9 300.0
H36 C26 H38 H37 120.0 119.9
H39 C25 SI1 C24 59.9 60.0
H40 C25 H39 H41 120.0 120.0
H40 C25 SI1 C24 179.9 180.0
H39 C25 H40 H41 240.0 240.0
H41 C25 SI1 C24 299.9 299.9
H39 C25 H41 H40 120.0 120.0
SI1 C24 H42 H43 120.0 120.0
SI1 C24 H42 H44 240.0 240.1
H43 C24 H42 H44 120.0 120.1
SI1 C24 H43 H42 240.0 240.0
SI1 C24 H43 H44 120.0 119.9
H42 C24 H43 H44 240.0 240.0
SI1 C24 H44 H42 120.0 119.9
SI1 C24 H44 H43 240.0 240.0
H42 C24 H44 H43 120.0 120.1