PDB Chemical Component 0OJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0OJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| OAB |
PBC |
1.526 |
1.480 |
| OAF |
PBC |
1.496 |
1.610 |
| OAG |
PBC |
1.525 |
1.610 |
| PBC |
OAS |
1.596 |
1.611 |
| OAH |
PBD |
1.523 |
1.479 |
| OAC |
PBD |
1.513 |
1.610 |
| OAT |
PBD |
1.572 |
1.611 |
| OAT |
PBE |
1.570 |
1.610 |
| PBD |
OAR |
1.595 |
1.610 |
| C2 |
N1 |
1.344 |
1.320 |
| C2 |
N3 |
1.343 |
1.316 |
| N1 |
C6 |
1.349 |
1.329 |
| OAS |
PBE |
1.583 |
1.610 |
| PBE |
OAI |
1.502 |
1.479 |
| PBE |
OAD |
1.507 |
1.609 |
| N3 |
C4 |
1.350 |
1.329 |
| C6 |
N6 |
1.444 |
1.384 |
| C6 |
C5 |
1.402 |
1.405 |
| OAR |
CAL |
1.413 |
1.430 |
| C4 |
C5 |
1.395 |
1.405 |
| C4 |
N9 |
1.358 |
1.372 |
| CAL |
CAY |
1.445 |
1.530 |
| C5 |
N7 |
1.351 |
1.355 |
| N9 |
CBB |
1.461 |
1.465 |
| N9 |
C8 |
1.343 |
1.363 |
| CAM |
CAX |
1.489 |
1.549 |
| CAM |
CBB |
1.487 |
1.542 |
| CAY |
CAZ |
1.539 |
1.542 |
| CAY |
CAX |
1.499 |
1.549 |
| N7 |
C8 |
1.346 |
1.302 |
| CAZ |
CBB |
1.513 |
1.539 |
| CAZ |
CAN |
1.513 |
1.530 |
| CAX |
OAE |
1.343 |
1.429 |
| CBB |
CAN |
1.507 |
1.531 |
| OAF |
H1 |
0.950 |
0.968 |
| OAG |
H2 |
0.950 |
0.966 |
| OAD |
H3 |
0.950 |
0.967 |
| OAC |
H4 |
0.950 |
0.967 |
| CAL |
H5 |
1.100 |
1.089 |
| CAL |
H6 |
1.100 |
1.089 |
| CAY |
H7 |
1.100 |
1.090 |
| CAZ |
H8 |
1.100 |
1.090 |
| CAN |
H9 |
1.100 |
1.090 |
| CAN |
H10 |
1.100 |
1.090 |
| CAX |
H11 |
1.100 |
1.090 |
| OAE |
H12 |
0.950 |
0.967 |
| CAM |
H13 |
1.100 |
1.090 |
| CAM |
H14 |
1.100 |
1.091 |
| C8 |
H15 |
1.080 |
1.080 |
| C2 |
H16 |
1.081 |
1.080 |
| N6 |
H17 |
1.000 |
0.970 |
| N6 |
H18 |
1.000 |
0.970 |
Bond Angles for 0OJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OAB |
PBC |
OAS |
111.7 |
109.5 |
| OAF |
PBC |
OAS |
112.7 |
109.4 |
| PBC |
OAF |
H1 |
109.5 |
114.0 |
| OAG |
PBC |
OAS |
108.2 |
109.5 |
| PBC |
OAS |
PBE |
122.7 |
133.9 |
| OAH |
PBD |
OAR |
110.5 |
109.5 |
| OAC |
PBD |
OAR |
111.9 |
109.5 |
| OAT |
PBD |
OAR |
110.7 |
109.5 |
| PBD |
OAR |
CAL |
119.5 |
123.0 |
| C2 |
N1 |
C6 |
119.6 |
121.2 |
| N1 |
C2 |
H16 |
119.2 |
118.8 |
| N1 |
C6 |
N6 |
119.8 |
120.8 |
| OAS |
PBE |
OAI |
110.4 |
109.5 |
| OAS |
PBE |
OAD |
110.3 |
109.5 |
| OAI |
PBE |
OAD |
109.3 |
109.5 |
| PBE |
OAD |
H3 |
109.5 |
114.0 |
| C6 |
N6 |
H17 |
109.5 |
120.0 |
| C6 |
N6 |
H18 |
109.4 |
120.0 |
| OAR |
CAL |
CAY |
118.7 |
109.5 |
| OAR |
CAL |
H5 |
107.1 |
109.5 |
| OAR |
CAL |
H6 |
107.1 |
109.5 |
| CAL |
CAY |
CAZ |
110.0 |
110.5 |
| CAL |
CAY |
CAX |
111.0 |
110.5 |
| CAY |
CAL |
H5 |
107.1 |
109.5 |
| CAY |
CAL |
H6 |
107.1 |
109.5 |
| CAL |
CAY |
H7 |
110.6 |
110.4 |
| N9 |
C8 |
H15 |
125.9 |
125.0 |
| CAM |
CAX |
H11 |
109.7 |
110.9 |
| CAZ |
CBB |
CAM |
107.3 |
106.6 |
| CBB |
CAM |
H13 |
110.3 |
110.5 |
| CBB |
CAM |
H14 |
110.3 |
110.5 |
| CAZ |
CAY |
CAX |
106.0 |
104.2 |
| CAY |
CAZ |
CBB |
105.9 |
106.6 |
| CAY |
CAZ |
CAN |
125.3 |
118.2 |
| CAZ |
CAY |
H7 |
109.3 |
110.5 |
| CAY |
CAZ |
H8 |
116.3 |
117.4 |
| CAY |
CAX |
OAE |
109.4 |
110.8 |
| CAX |
CAY |
H7 |
109.8 |
110.6 |
| CAY |
CAX |
H11 |
109.5 |
110.7 |
| N7 |
C8 |
H15 |
125.9 |
125.0 |
| CAN |
CAZ |
CBB |
59.7 |
59.8 |
| CAZ |
CBB |
CAN |
60.1 |
59.8 |
| CBB |
CAZ |
H8 |
116.8 |
121.3 |
| CAN |
CAZ |
H8 |
116.8 |
119.7 |
| CAZ |
CAN |
H9 |
120.0 |
117.5 |
| CAZ |
CAN |
H10 |
120.0 |
117.5 |
| OAE |
CAX |
H11 |
111.9 |
110.7 |
| CAX |
OAE |
H12 |
109.5 |
114.0 |
| CBB |
CAN |
H9 |
120.0 |
117.4 |
| CBB |
CAN |
H10 |
120.0 |
117.5 |
| H5 |
CAL |
H6 |
109.4 |
109.5 |
| H9 |
CAN |
H10 |
109.4 |
115.5 |
| H13 |
CAM |
H14 |
109.5 |
110.5 |
| H17 |
N6 |
H18 |
109.5 |
119.9 |
Torsion Angles for 0OJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OAF |
PBC |
OAB |
OAS |
236.4 |
119.9 |
| OAB |
PBC |
OAF |
H1 |
360.0 |
60.0 |
| OAG |
PBC |
OAB |
OAS |
122.3 |
240.0 |
| OAB |
PBC |
OAS |
PBE |
290.0 |
319.9 |
| OAB |
PBC |
OAF |
OAS |
123.0 |
240.0 |
| OAG |
PBC |
OAF |
OAS |
242.9 |
120.0 |
| OAF |
PBC |
OAS |
PBE |
50.2 |
200.0 |
| OAB |
PBC |
OAG |
OAS |
235.8 |
120.1 |
| OAF |
PBC |
OAG |
OAS |
120.2 |
240.1 |
| OAG |
PBC |
OAF |
H1 |
119.9 |
299.9 |
| OAG |
PBC |
OAS |
PBE |
164.9 |
80.0 |
| OAS |
PBC |
OAF |
H1 |
237.0 |
180.0 |
| PBC |
OAS |
PBE |
OAI |
273.4 |
45.0 |
| PBC |
OAS |
PBE |
OAD |
152.6 |
285.0 |
| OAC |
PBD |
OAH |
OAR |
236.8 |
240.0 |
| OAT |
PBD |
OAH |
OAR |
120.9 |
120.0 |
| OAH |
PBD |
OAR |
CAL |
229.7 |
305.0 |
| OAH |
PBD |
OAC |
OAR |
122.3 |
120.0 |
| OAT |
PBD |
OAC |
OAR |
238.4 |
240.0 |
| OAC |
PBD |
OAR |
CAL |
351.0 |
65.0 |
| OAH |
PBD |
OAT |
OAR |
239.2 |
240.0 |
| OAC |
PBD |
OAT |
OAR |
122.3 |
120.0 |
| OAT |
PBD |
OAR |
CAL |
110.5 |
185.0 |
| OAT |
PBE |
OAD |
H3 |
235.4 |
60.0 |
| PBD |
OAR |
CAL |
CAY |
180.2 |
180.0 |
| PBD |
OAR |
CAL |
H5 |
301.5 |
300.0 |
| PBD |
OAR |
CAL |
H6 |
58.9 |
60.0 |
| C2 |
N1 |
C6 |
N6 |
180.3 |
180.0 |
| C6 |
N1 |
C2 |
H16 |
179.9 |
180.0 |
| N1 |
C6 |
N6 |
H17 |
360.0 |
0.1 |
| N1 |
C6 |
N6 |
H18 |
120.0 |
180.0 |
| OAI |
PBE |
OAS |
OAD |
120.8 |
120.0 |
| OAS |
PBE |
OAD |
H3 |
121.5 |
300.0 |
| OAS |
PBE |
OAI |
OAD |
238.6 |
240.0 |
| OAI |
PBE |
OAD |
H3 |
0.0 |
180.0 |
| OAS |
PBE |
OAD |
OAI |
121.5 |
120.0 |
| H17 |
N6 |
C6 |
H18 |
240.0 |
180.1 |
| OAR |
CAL |
CAY |
CAZ |
253.3 |
175.0 |
| OAR |
CAL |
CAY |
CAX |
10.3 |
289.8 |
| CAY |
CAL |
OAR |
H5 |
238.7 |
240.0 |
| CAY |
CAL |
OAR |
H6 |
121.3 |
120.0 |
| OAR |
CAL |
CAY |
H7 |
132.5 |
52.4 |
| H5 |
CAL |
OAR |
H6 |
242.6 |
240.0 |
| C4 |
N9 |
C8 |
H15 |
179.6 |
180.2 |
| OAR |
CAL |
CAY |
H5 |
121.3 |
120.0 |
| OAR |
CAL |
CAY |
H6 |
238.7 |
240.0 |
| CAZ |
CAY |
CAL |
CAX |
242.9 |
245.2 |
| CAL |
CAY |
CAZ |
CBB |
110.7 |
142.2 |
| CAL |
CAY |
CAZ |
CAN |
174.6 |
206.4 |
| CAZ |
CAY |
CAL |
H7 |
120.8 |
122.6 |
| CAL |
CAY |
CAZ |
H8 |
339.2 |
2.3 |
| CAL |
CAY |
CAX |
OAE |
146.1 |
85.1 |
| CAX |
CAY |
CAL |
H7 |
237.9 |
237.4 |
| CAL |
CAY |
CAX |
H11 |
23.2 |
321.8 |
| H5 |
CAL |
CAY |
H6 |
117.3 |
120.0 |
| C5 |
N7 |
C8 |
H15 |
180.4 |
180.0 |
| N9 |
CBB |
CAM |
H13 |
53.2 |
357.7 |
| N9 |
CBB |
CAM |
H14 |
292.1 |
235.0 |
| N9 |
CBB |
CAZ |
H8 |
346.8 |
359.9 |
| N9 |
CBB |
CAN |
H9 |
121.4 |
141.3 |
| N9 |
CBB |
CAN |
H10 |
340.4 |
356.5 |
| N7 |
C8 |
N9 |
H15 |
180.0 |
180.0 |
| CAZ |
CBB |
CAM |
CAX |
24.4 |
336.4 |
| CAM |
CAX |
CAY |
H7 |
142.4 |
80.8 |
| CAY |
CAX |
CAM |
H11 |
118.1 |
118.3 |
| OAE |
CAX |
CAM |
H11 |
236.4 |
236.7 |
| CAM |
CAX |
OAE |
H12 |
180.0 |
66.7 |
| CBB |
CAM |
CAX |
H11 |
211.5 |
279.6 |
| CAY |
CAZ |
CBB |
CAM |
350.9 |
0.0 |
| CAN |
CAZ |
CBB |
CAM |
229.0 |
246.6 |
| CAZ |
CBB |
CAM |
CAN |
64.9 |
64.1 |
| CAM |
CBB |
CAZ |
H8 |
122.1 |
138.0 |
| CAM |
CBB |
CAN |
H9 |
336.1 |
346.0 |
| CAM |
CBB |
CAN |
H10 |
195.1 |
201.3 |
| H13 |
CAM |
CBB |
H14 |
121.1 |
122.6 |
| CAL |
CAY |
CAZ |
CAX |
120.1 |
118.7 |
| CAZ |
CAY |
CAL |
H5 |
132.0 |
55.0 |
| CAZ |
CAY |
CAL |
H6 |
14.6 |
295.0 |
| CAL |
CAY |
CAZ |
H7 |
238.4 |
237.5 |
| CAZ |
CAY |
CAX |
OAE |
265.6 |
203.8 |
| CAX |
CAY |
CAZ |
H7 |
118.3 |
118.8 |
| CAZ |
CAY |
CAX |
H11 |
142.7 |
80.5 |
| CAN |
CAZ |
CAY |
CBB |
63.8 |
64.2 |
| CAY |
CAZ |
CBB |
CAN |
121.9 |
113.4 |
| CBB |
CAZ |
CAY |
H8 |
131.5 |
139.9 |
| CAN |
CAZ |
CAY |
H8 |
195.3 |
204.1 |
| CAY |
CAZ |
CAN |
H9 |
20.9 |
14.0 |
| CAY |
CAZ |
CAN |
H10 |
161.9 |
158.8 |
| CAL |
CAY |
CAX |
CAZ |
240.5 |
241.3 |
| CAX |
CAY |
CAL |
H5 |
249.0 |
169.8 |
| CAX |
CAY |
CAL |
H6 |
131.7 |
49.8 |
| CAL |
CAY |
CAX |
H7 |
122.6 |
122.5 |
| CAM |
CAX |
CAY |
H11 |
241.7 |
241.6 |
| CAX |
CAY |
CAZ |
CBB |
350.6 |
23.6 |
| CAX |
CAY |
CAZ |
CAN |
54.4 |
87.8 |
| CAZ |
CAY |
CAX |
H7 |
242.1 |
241.2 |
| CAX |
CAY |
CAZ |
H8 |
219.1 |
243.7 |
| OAE |
CAX |
CAY |
H11 |
122.9 |
123.2 |
| CAY |
CAX |
OAE |
H12 |
296.2 |
180.0 |
| N9 |
C8 |
N7 |
H15 |
180.0 |
180.0 |
| CAZ |
CBB |
CAM |
H13 |
264.9 |
217.7 |
| CAZ |
CBB |
CAM |
H14 |
143.9 |
95.0 |
| CBB |
CAZ |
CAY |
CAX |
350.6 |
23.6 |
| CBB |
CAZ |
CAY |
H7 |
232.3 |
264.8 |
| CAY |
CAZ |
CBB |
H8 |
228.8 |
222.0 |
| CAN |
CAZ |
CBB |
H8 |
106.9 |
108.6 |
| CBB |
CAZ |
CAN |
H9 |
109.5 |
107.6 |
| CBB |
CAZ |
CAN |
H10 |
250.5 |
252.4 |
| CAZ |
CBB |
CAN |
H9 |
250.4 |
252.4 |
| CAZ |
CBB |
CAN |
H10 |
109.5 |
107.7 |
| CAN |
CAZ |
CAY |
CAX |
54.4 |
87.8 |
| CAY |
CAZ |
CAN |
CBB |
271.4 |
266.4 |
| CAN |
CAZ |
CAY |
H7 |
296.2 |
329.0 |
| CAY |
CAZ |
CAN |
H8 |
164.6 |
155.3 |
| CAN |
CAZ |
CBB |
CAN |
360.0 |
-0.0 |
| CBB |
CAZ |
CAN |
H8 |
253.2 |
248.9 |
| CBB |
CAN |
CAZ |
H9 |
250.5 |
252.4 |
| CBB |
CAN |
CAZ |
H10 |
109.5 |
107.6 |
| H9 |
CAN |
CAZ |
H10 |
219.0 |
215.2 |
| CAM |
CAX |
OAE |
H11 |
122.3 |
123.4 |
| OAE |
CAX |
CAY |
H7 |
23.5 |
322.5 |
| CAY |
CAX |
OAE |
H11 |
238.5 |
236.7 |
| CAZ |
CBB |
CAN |
CAM |
274.4 |
266.4 |
| CAN |
CBB |
CAZ |
H8 |
253.1 |
251.4 |
| CBB |
CAN |
CAZ |
H8 |
106.8 |
111.1 |
| CAZ |
CAN |
CBB |
H9 |
109.6 |
107.6 |
| CAZ |
CAN |
CBB |
H10 |
250.5 |
252.3 |
| H9 |
CAN |
CBB |
H10 |
140.9 |
144.7 |
| H1 |
OAF |
PBC |
OAS |
237.0 |
180.0 |
| H2 |
OAG |
PBC |
OAS |
124.2 |
59.9 |
| H4 |
OAC |
PBD |
OAR |
237.7 |
60.0 |
| OAR |
CAL |
H5 |
CAY |
231.6 |
240.0 |
| OAR |
CAL |
H5 |
H6 |
115.8 |
120.0 |
| H5 |
CAL |
CAY |
CAZ |
132.0 |
55.0 |
| H5 |
CAL |
CAY |
CAX |
249.0 |
169.8 |
| CAY |
CAL |
H5 |
H6 |
244.2 |
240.0 |
| H5 |
CAL |
CAY |
H7 |
11.2 |
292.4 |
| OAR |
CAL |
H6 |
CAY |
128.4 |
120.0 |
| OAR |
CAL |
H6 |
H5 |
244.2 |
240.0 |
| H6 |
CAL |
CAY |
CAZ |
14.6 |
295.0 |
| H6 |
CAL |
CAY |
CAX |
131.7 |
49.8 |
| CAY |
CAL |
H6 |
H5 |
115.8 |
120.0 |
| H6 |
CAL |
CAY |
H7 |
253.8 |
172.4 |
| CAL |
CAY |
H7 |
CAZ |
121.2 |
122.6 |
| CAL |
CAY |
H7 |
CAX |
237.1 |
237.4 |
| H7 |
CAY |
CAL |
H5 |
11.2 |
292.4 |
| H7 |
CAY |
CAL |
H6 |
253.8 |
172.4 |
| CAZ |
CAY |
H7 |
CAX |
115.9 |
114.9 |
| H7 |
CAY |
CAZ |
CBB |
232.3 |
264.8 |
| H7 |
CAY |
CAZ |
CAN |
296.2 |
329.0 |
| H7 |
CAY |
CAZ |
H8 |
100.8 |
124.9 |
| H7 |
CAY |
CAX |
OAE |
23.5 |
322.5 |
| H7 |
CAY |
CAX |
H11 |
260.6 |
199.3 |
| H8 |
CAZ |
CBB |
CAM |
122.1 |
138.0 |
| H8 |
CAZ |
CAY |
CAX |
219.1 |
243.7 |
| CAY |
CAZ |
H8 |
CBB |
126.2 |
133.7 |
| CAY |
CAZ |
H8 |
CAN |
194.0 |
204.5 |
| H8 |
CAZ |
CAY |
H7 |
100.8 |
124.9 |
| CAN |
CAZ |
H8 |
CBB |
292.2 |
289.3 |
| H8 |
CAZ |
CBB |
CAN |
253.1 |
251.4 |
| H8 |
CAZ |
CAN |
H9 |
216.3 |
218.7 |
| H8 |
CAZ |
CAN |
H10 |
357.3 |
3.5 |
| H9 |
CAN |
CAZ |
CBB |
109.5 |
107.6 |
| H9 |
CAN |
CAZ |
H8 |
216.3 |
218.7 |
| CAZ |
CAN |
H9 |
H10 |
144.7 |
145.5 |
| CBB |
CAN |
H9 |
H10 |
215.4 |
214.6 |
| H10 |
CAN |
CAZ |
CBB |
250.5 |
252.4 |
| H10 |
CAN |
CAZ |
H8 |
357.3 |
3.5 |
| CAZ |
CAN |
H10 |
H9 |
215.3 |
214.5 |
| CBB |
CAN |
H10 |
H9 |
144.6 |
145.4 |
| CAY |
CAX |
H11 |
OAE |
121.4 |
123.3 |
| H11 |
CAX |
CAY |
H7 |
260.6 |
199.3 |
| H11 |
CAX |
OAE |
H12 |
57.7 |
303.3 |
| H12 |
OAE |
CAX |
H11 |
57.7 |
303.3 |
| H13 |
CAM |
CAX |
H11 |
330.9 |
38.3 |
| CBB |
CAM |
H13 |
H14 |
238.5 |
237.4 |
| H14 |
CAM |
CAX |
H11 |
92.0 |
160.9 |
| CBB |
CAM |
H14 |
H13 |
121.6 |
122.6 |
| H16 |
C2 |
N1 |
C6 |
179.9 |
180.0 |
| C6 |
N6 |
H17 |
H18 |
120.0 |
179.9 |
| C6 |
N6 |
H18 |
H17 |
240.0 |
180.1 |