PDB Chemical Component 0O7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0O7
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.518 |
1.530 |
C4 |
C5 |
1.392 |
1.381 |
C4 |
C3 |
1.386 |
1.384 |
C2 |
C3 |
1.524 |
1.507 |
C5 |
C6 |
1.403 |
1.393 |
C3 |
C8 |
1.404 |
1.383 |
C10 |
C11 |
1.391 |
1.376 |
C10 |
C9 |
1.403 |
1.395 |
C11 |
C12 |
1.403 |
1.395 |
C6 |
C9 |
1.506 |
1.484 |
C6 |
C7 |
1.414 |
1.394 |
C8 |
C7 |
1.402 |
1.380 |
C9 |
C25 |
1.414 |
1.390 |
C14 |
N13 |
1.467 |
1.465 |
C12 |
N13 |
1.401 |
1.398 |
C12 |
C24 |
1.425 |
1.401 |
N13 |
S15 |
1.673 |
1.668 |
C25 |
C24 |
1.402 |
1.392 |
C24 |
C23 |
1.482 |
1.484 |
O16 |
S15 |
1.429 |
1.421 |
S15 |
O17 |
1.410 |
1.421 |
S15 |
C18 |
1.750 |
1.767 |
C23 |
C18 |
1.412 |
1.425 |
C23 |
N22 |
1.307 |
1.302 |
C18 |
C19 |
1.340 |
1.329 |
N22 |
N20 |
1.402 |
1.406 |
C19 |
N20 |
1.346 |
1.357 |
C1 |
H1 |
1.100 |
1.089 |
C1 |
H2 |
1.100 |
1.091 |
C1 |
H3 |
1.100 |
1.090 |
C2 |
H4 |
1.100 |
1.090 |
C2 |
H5 |
1.100 |
1.091 |
C4 |
H6 |
1.080 |
1.080 |
C5 |
H7 |
1.080 |
1.080 |
C7 |
H8 |
1.081 |
1.080 |
C8 |
H9 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.080 |
C11 |
H11 |
1.080 |
1.080 |
C14 |
H12 |
1.100 |
1.090 |
C14 |
H13 |
1.100 |
1.090 |
C14 |
H14 |
1.100 |
1.091 |
C19 |
H15 |
1.080 |
1.080 |
N20 |
H16 |
1.000 |
0.970 |
C25 |
H17 |
1.080 |
1.079 |
Bond Angles for 0O7
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
108.7 |
109.5 |
C2 |
C1 |
H1 |
109.5 |
109.5 |
C2 |
C1 |
H2 |
109.5 |
109.4 |
C2 |
C1 |
H3 |
109.5 |
109.5 |
C1 |
C2 |
H4 |
109.7 |
109.5 |
C1 |
C2 |
H5 |
109.7 |
109.5 |
C4 |
C5 |
C6 |
119.1 |
119.9 |
C5 |
C4 |
H6 |
118.9 |
120.0 |
C4 |
C5 |
H7 |
120.5 |
120.0 |
C4 |
C3 |
C8 |
120.1 |
120.3 |
C2 |
C3 |
C8 |
121.4 |
119.9 |
C3 |
C2 |
H4 |
109.7 |
109.5 |
C3 |
C2 |
H5 |
109.6 |
109.5 |
C5 |
C6 |
C9 |
121.8 |
120.1 |
C5 |
C6 |
C7 |
118.6 |
119.7 |
C6 |
C5 |
H7 |
120.5 |
120.1 |
C3 |
C8 |
C7 |
117.9 |
120.2 |
C3 |
C8 |
H9 |
121.0 |
119.9 |
C10 |
C11 |
C12 |
119.3 |
120.8 |
C11 |
C10 |
H10 |
118.6 |
119.9 |
C10 |
C11 |
H11 |
120.3 |
119.6 |
C10 |
C9 |
C25 |
118.1 |
119.8 |
C11 |
C12 |
N13 |
116.8 |
117.5 |
C11 |
C12 |
C24 |
118.8 |
119.1 |
C12 |
C11 |
H11 |
120.3 |
119.6 |
C7 |
C6 |
C9 |
119.5 |
120.1 |
C6 |
C9 |
C25 |
121.6 |
120.1 |
C6 |
C7 |
H8 |
118.9 |
120.0 |
C8 |
C7 |
H8 |
118.9 |
120.1 |
C9 |
C25 |
C24 |
119.8 |
120.1 |
C9 |
C25 |
H17 |
120.1 |
120.0 |
C14 |
N13 |
S15 |
119.2 |
120.1 |
N13 |
C12 |
C24 |
124.3 |
123.4 |
C12 |
N13 |
S15 |
119.7 |
119.9 |
C12 |
C24 |
C23 |
120.5 |
121.0 |
N13 |
S15 |
O17 |
110.4 |
107.0 |
N13 |
S15 |
C18 |
105.5 |
103.3 |
O16 |
S15 |
O17 |
119.3 |
123.7 |
O16 |
S15 |
C18 |
108.8 |
107.1 |
O17 |
S15 |
C18 |
110.7 |
107.0 |
S15 |
C18 |
C19 |
130.9 |
131.5 |
C18 |
C19 |
N20 |
105.6 |
107.5 |
C18 |
C19 |
H15 |
127.2 |
126.2 |
N22 |
N20 |
H16 |
124.6 |
125.9 |
N20 |
C19 |
H15 |
127.2 |
126.3 |
C19 |
N20 |
H16 |
124.6 |
125.8 |
H1 |
C1 |
H2 |
109.5 |
109.4 |
H1 |
C1 |
H3 |
109.4 |
109.5 |
H2 |
C1 |
H3 |
109.5 |
109.5 |
H4 |
C2 |
H5 |
109.5 |
109.4 |
H12 |
C14 |
H13 |
109.5 |
109.5 |
H12 |
C14 |
H14 |
109.5 |
109.5 |
H13 |
C14 |
H14 |
109.5 |
109.5 |
Torsion Angles for 0O7
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
C8 |
103.9 |
90.0 |
C3 |
C2 |
C1 |
H4 |
240.1 |
240.0 |
C3 |
C2 |
C1 |
H5 |
119.9 |
120.0 |
H1 |
C1 |
C2 |
H2 |
240.0 |
240.1 |
H1 |
C1 |
C2 |
H3 |
120.0 |
120.1 |
H2 |
C1 |
C2 |
H3 |
240.0 |
240.0 |
H4 |
C2 |
C1 |
H5 |
239.7 |
240.0 |
C5 |
C4 |
C3 |
C8 |
359.8 |
0.2 |
C4 |
C5 |
C6 |
C9 |
181.2 |
180.0 |
C4 |
C5 |
C6 |
C7 |
357.7 |
0.1 |
C6 |
C5 |
C4 |
H7 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C8 |
181.1 |
179.8 |
C4 |
C3 |
C2 |
H4 |
162.9 |
150.2 |
C4 |
C3 |
C2 |
H5 |
42.6 |
30.3 |
C4 |
C3 |
C8 |
C7 |
0.1 |
359.5 |
C4 |
C3 |
C8 |
H9 |
180.1 |
179.8 |
C3 |
C2 |
C1 |
H1 |
180.0 |
300.1 |
C3 |
C2 |
C1 |
H2 |
300.0 |
60.0 |
C3 |
C2 |
C1 |
H3 |
60.0 |
180.0 |
C1 |
C2 |
C3 |
H4 |
119.9 |
120.0 |
C1 |
C2 |
C3 |
H5 |
240.1 |
240.0 |
C4 |
C3 |
C2 |
C8 |
178.9 |
180.2 |
C2 |
C3 |
C8 |
C7 |
179.0 |
179.7 |
C2 |
C3 |
C8 |
H9 |
359.0 |
0.0 |
H4 |
C2 |
C3 |
H5 |
120.3 |
119.9 |
C6 |
C5 |
C4 |
H6 |
181.3 |
180.0 |
C4 |
C5 |
C6 |
H7 |
180.0 |
180.0 |
C7 |
C6 |
C5 |
C9 |
176.5 |
180.1 |
C5 |
C6 |
C9 |
C25 |
216.0 |
180.0 |
C5 |
C6 |
C7 |
H8 |
182.2 |
180.0 |
C8 |
C3 |
C2 |
H4 |
344.0 |
330.0 |
C8 |
C3 |
C2 |
H5 |
223.7 |
210.0 |
C3 |
C8 |
C7 |
H8 |
178.9 |
180.3 |
C11 |
C10 |
C9 |
C25 |
358.4 |
0.6 |
C10 |
C11 |
C12 |
N13 |
181.3 |
179.0 |
C10 |
C11 |
C12 |
C24 |
359.1 |
359.8 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C6 |
C9 |
C10 |
C25 |
177.9 |
179.7 |
C10 |
C9 |
C25 |
C24 |
359.5 |
359.5 |
C10 |
C9 |
C25 |
H17 |
179.6 |
179.9 |
C12 |
C11 |
C10 |
H10 |
182.3 |
179.7 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
N13 |
C12 |
C11 |
C24 |
182.2 |
179.2 |
C11 |
C12 |
N13 |
S15 |
202.3 |
150.0 |
C11 |
C12 |
C24 |
C23 |
180.6 |
181.2 |
C5 |
C6 |
C9 |
C7 |
176.5 |
180.1 |
C9 |
C6 |
C5 |
H7 |
1.2 |
359.9 |
C10 |
C9 |
C6 |
C25 |
182.2 |
180.3 |
C9 |
C6 |
C7 |
H8 |
358.8 |
0.1 |
C6 |
C9 |
C25 |
C24 |
181.7 |
179.9 |
C6 |
C9 |
C25 |
H17 |
1.7 |
0.2 |
C5 |
C6 |
C7 |
C9 |
183.4 |
179.9 |
C7 |
C6 |
C5 |
H7 |
177.7 |
180.0 |
C3 |
C8 |
C7 |
C6 |
358.9 |
0.6 |
C7 |
C6 |
C9 |
C25 |
39.5 |
359.9 |
C8 |
C7 |
C6 |
H8 |
180.0 |
179.7 |
C3 |
C8 |
C7 |
H9 |
180.0 |
180.3 |
C8 |
C7 |
C6 |
C9 |
178.8 |
179.8 |
C6 |
C7 |
C8 |
H8 |
180.0 |
180.3 |
C14 |
N13 |
C12 |
C24 |
202.6 |
149.1 |
C12 |
N13 |
C14 |
S15 |
182.0 |
180.0 |
C14 |
N13 |
S15 |
O17 |
31.2 |
104.5 |
C14 |
N13 |
S15 |
C18 |
150.8 |
217.3 |
C11 |
C12 |
N13 |
C24 |
177.7 |
180.9 |
N13 |
C12 |
C11 |
H11 |
1.3 |
359.0 |
C14 |
N13 |
C12 |
S15 |
178.0 |
180.0 |
N13 |
C12 |
C24 |
C23 |
358.3 |
2.0 |
C12 |
N13 |
S15 |
O17 |
209.2 |
284.5 |
C12 |
N13 |
S15 |
C18 |
328.8 |
37.3 |
C11 |
C12 |
C24 |
N13 |
182.4 |
179.1 |
C24 |
C12 |
C11 |
H11 |
179.1 |
179.8 |
C9 |
C25 |
C24 |
C12 |
1.8 |
360.0 |
C24 |
C12 |
N13 |
S15 |
24.6 |
329.1 |
S15 |
N13 |
C12 |
C24 |
24.6 |
329.1 |
O16 |
S15 |
N13 |
O17 |
232.9 |
225.6 |
O16 |
S15 |
N13 |
C18 |
113.3 |
112.8 |
O17 |
S15 |
N13 |
C18 |
240.4 |
247.2 |
N13 |
S15 |
C18 |
C19 |
199.7 |
157.8 |
C9 |
C25 |
C24 |
H17 |
180.0 |
180.3 |
C9 |
C25 |
C24 |
C23 |
180.1 |
179.2 |
N13 |
S15 |
O16 |
O17 |
121.1 |
124.8 |
N13 |
S15 |
O16 |
C18 |
249.3 |
249.7 |
O17 |
S15 |
O16 |
C18 |
128.2 |
124.9 |
O16 |
S15 |
C18 |
C19 |
92.1 |
45.0 |
N13 |
S15 |
O17 |
C18 |
116.4 |
110.2 |
O16 |
S15 |
O17 |
C18 |
232.7 |
235.0 |
O17 |
S15 |
C18 |
C19 |
319.2 |
270.5 |
N13 |
S15 |
C18 |
O17 |
240.5 |
247.3 |
O16 |
S15 |
C18 |
O17 |
132.9 |
134.5 |
S15 |
C18 |
C19 |
N20 |
181.7 |
180.2 |
S15 |
C18 |
C19 |
H15 |
1.7 |
0.2 |
C12 |
C24 |
C23 |
C18 |
350.3 |
13.9 |
C23 |
C18 |
C19 |
H15 |
180.8 |
180.1 |
C12 |
C24 |
C23 |
N22 |
168.4 |
193.7 |
C23 |
N22 |
N20 |
H16 |
181.1 |
179.9 |
N20 |
C19 |
C18 |
H15 |
180.0 |
180.0 |
C18 |
C19 |
N20 |
H16 |
178.8 |
180.0 |
N22 |
N20 |
C19 |
H15 |
178.8 |
180.0 |
C19 |
N20 |
N22 |
H16 |
180.0 |
180.0 |
C18 |
C19 |
N20 |
H15 |
180.0 |
180.0 |
N22 |
N20 |
C19 |
H16 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
180.0 |
300.1 |
C2 |
C1 |
H1 |
H2 |
120.0 |
119.9 |
C2 |
C1 |
H1 |
H3 |
240.0 |
239.9 |
H1 |
C1 |
C2 |
H4 |
299.9 |
60.1 |
H1 |
C1 |
C2 |
H5 |
60.1 |
180.0 |
H2 |
C1 |
H1 |
H3 |
120.0 |
120.0 |
H2 |
C1 |
C2 |
C3 |
300.0 |
60.0 |
C2 |
C1 |
H2 |
H1 |
240.0 |
240.1 |
C2 |
C1 |
H2 |
H3 |
120.0 |
120.0 |
H2 |
C1 |
C2 |
H4 |
59.9 |
180.0 |
H2 |
C1 |
C2 |
H5 |
180.1 |
299.9 |
H1 |
C1 |
H2 |
H3 |
240.0 |
240.0 |
H3 |
C1 |
C2 |
C3 |
60.0 |
180.0 |
C2 |
C1 |
H3 |
H1 |
120.0 |
120.0 |
C2 |
C1 |
H3 |
H2 |
240.0 |
240.0 |
H3 |
C1 |
C2 |
H4 |
179.9 |
300.0 |
H3 |
C1 |
C2 |
H5 |
300.1 |
59.9 |
H1 |
C1 |
H3 |
H2 |
120.0 |
120.0 |
C1 |
C2 |
H4 |
C3 |
240.7 |
240.0 |
H4 |
C2 |
C1 |
H1 |
299.9 |
60.1 |
H4 |
C2 |
C1 |
H2 |
59.9 |
180.0 |
H4 |
C2 |
C1 |
H3 |
179.9 |
300.0 |
C1 |
C2 |
H4 |
H5 |
120.4 |
120.0 |
H4 |
C2 |
C3 |
C8 |
344.0 |
330.0 |
C3 |
C2 |
H4 |
H5 |
239.7 |
240.0 |
C1 |
C2 |
H5 |
C3 |
119.3 |
120.0 |
H5 |
C2 |
C1 |
H1 |
60.1 |
180.0 |
H5 |
C2 |
C1 |
H2 |
180.1 |
299.9 |
H5 |
C2 |
C1 |
H3 |
300.1 |
59.9 |
C1 |
C2 |
H5 |
H4 |
239.6 |
240.0 |
H5 |
C2 |
C3 |
C8 |
223.7 |
210.0 |
C3 |
C2 |
H5 |
H4 |
120.3 |
120.0 |
H6 |
C4 |
C5 |
C6 |
181.3 |
180.0 |
H6 |
C4 |
C5 |
H7 |
1.3 |
360.0 |
H6 |
C4 |
C3 |
C8 |
179.8 |
180.3 |
C4 |
C5 |
H7 |
C6 |
180.0 |
180.0 |
H7 |
C5 |
C4 |
H6 |
1.3 |
360.0 |
H7 |
C5 |
C6 |
C9 |
1.2 |
359.9 |
H7 |
C5 |
C6 |
C7 |
177.7 |
180.0 |
H8 |
C7 |
C6 |
C9 |
358.8 |
0.1 |
C3 |
C8 |
H9 |
C7 |
180.0 |
179.7 |
H9 |
C8 |
C7 |
H8 |
358.9 |
360.0 |
H10 |
C10 |
C11 |
C12 |
182.3 |
179.7 |
H10 |
C10 |
C11 |
H11 |
2.3 |
359.7 |
H10 |
C10 |
C9 |
C25 |
178.4 |
180.6 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C10 |
H10 |
2.3 |
359.7 |
H11 |
C11 |
C12 |
N13 |
1.3 |
359.0 |
H11 |
C11 |
C12 |
C24 |
179.1 |
179.8 |
H12 |
C14 |
N13 |
S15 |
360.0 |
270.0 |
H13 |
C14 |
H12 |
H14 |
120.0 |
120.0 |
H13 |
C14 |
N13 |
S15 |
120.0 |
30.0 |
H12 |
C14 |
H13 |
H14 |
240.0 |
240.0 |
H14 |
C14 |
N13 |
S15 |
240.0 |
150.0 |
H12 |
C14 |
H14 |
H13 |
120.0 |
120.0 |
C18 |
C19 |
H15 |
N20 |
180.0 |
180.0 |
H15 |
C19 |
N20 |
H16 |
358.8 |
360.0 |
H16 |
N20 |
C19 |
H15 |
358.8 |
360.0 |
C9 |
C25 |
H17 |
C24 |
180.0 |
179.7 |