PDB Chemical Component 0O5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0O5
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.506 |
1.506 |
C2 |
N6 |
1.348 |
1.323 |
C2 |
C3 |
1.390 |
1.364 |
N6 |
C4 |
1.360 |
1.322 |
C14 |
C17 |
1.393 |
1.377 |
C14 |
C9 |
1.391 |
1.395 |
C17 |
C13 |
1.399 |
1.397 |
C3 |
C5 |
1.380 |
1.407 |
O19 |
C18 |
1.218 |
1.216 |
C4 |
C9 |
1.487 |
1.481 |
C4 |
C7 |
1.401 |
1.414 |
C9 |
C15 |
1.396 |
1.395 |
C13 |
C18 |
1.502 |
1.478 |
C13 |
C16 |
1.390 |
1.397 |
C5 |
C7 |
1.485 |
1.419 |
C5 |
C8 |
1.390 |
1.403 |
C18 |
N20 |
1.337 |
1.347 |
C7 |
C12 |
1.396 |
1.400 |
C15 |
C16 |
1.391 |
1.377 |
C8 |
C10 |
1.390 |
1.363 |
N20 |
C21 |
1.455 |
1.466 |
C12 |
C11 |
1.390 |
1.363 |
C27 |
C25 |
1.525 |
1.531 |
C27 |
N23 |
1.470 |
1.470 |
C21 |
C22 |
1.525 |
1.530 |
C10 |
C11 |
1.396 |
1.394 |
C25 |
O26 |
1.431 |
1.429 |
O26 |
C24 |
1.436 |
1.430 |
C22 |
N23 |
1.476 |
1.469 |
N23 |
C28 |
1.473 |
1.470 |
C28 |
C24 |
1.529 |
1.532 |
N20 |
H1 |
1.000 |
0.970 |
C21 |
H2 |
1.100 |
1.089 |
C21 |
H3 |
1.100 |
1.090 |
C22 |
H4 |
1.100 |
1.091 |
C22 |
H5 |
1.100 |
1.090 |
C28 |
H7 |
1.100 |
1.090 |
C28 |
H8 |
1.100 |
1.089 |
C24 |
H9 |
1.100 |
1.089 |
C24 |
H10 |
1.100 |
1.090 |
C25 |
H11 |
1.100 |
1.090 |
C25 |
H12 |
1.100 |
1.090 |
C27 |
H13 |
1.100 |
1.090 |
C27 |
H14 |
1.100 |
1.089 |
C17 |
H15 |
1.080 |
1.080 |
C14 |
H16 |
1.080 |
1.080 |
C16 |
H17 |
1.080 |
1.080 |
C15 |
H18 |
1.080 |
1.080 |
C1 |
H19 |
1.100 |
1.090 |
C1 |
H20 |
1.100 |
1.090 |
C1 |
H21 |
1.100 |
1.090 |
C12 |
H22 |
1.080 |
1.080 |
C11 |
H23 |
1.080 |
1.079 |
C10 |
H24 |
1.080 |
1.080 |
C8 |
H25 |
1.080 |
1.080 |
C3 |
H26 |
1.080 |
1.080 |
Bond Angles for 0O5
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
119.6 |
119.0 |
C2 |
C3 |
C5 |
119.8 |
118.9 |
C2 |
C3 |
H26 |
120.1 |
120.6 |
N6 |
C4 |
C7 |
119.7 |
119.7 |
C14 |
C17 |
H15 |
119.7 |
120.0 |
C14 |
C9 |
C15 |
119.7 |
120.1 |
C9 |
C14 |
H16 |
120.2 |
120.0 |
C17 |
C13 |
C16 |
119.8 |
120.0 |
O19 |
C18 |
N20 |
122.1 |
120.0 |
C4 |
C7 |
C12 |
124.3 |
122.1 |
C9 |
C15 |
H18 |
119.6 |
120.1 |
C13 |
C16 |
H17 |
120.3 |
120.0 |
C5 |
C8 |
H25 |
120.3 |
120.3 |
C18 |
N20 |
C21 |
128.0 |
120.0 |
C18 |
N20 |
H1 |
116.0 |
120.0 |
C7 |
C12 |
C11 |
119.7 |
119.6 |
C7 |
C12 |
H22 |
120.1 |
120.2 |
C15 |
C16 |
H17 |
120.2 |
120.1 |
C8 |
C10 |
H24 |
119.6 |
119.5 |
N20 |
C21 |
C22 |
104.2 |
109.5 |
C21 |
N20 |
H1 |
116.0 |
120.0 |
N20 |
C21 |
H2 |
110.8 |
109.5 |
N20 |
C21 |
H3 |
110.8 |
109.4 |
C11 |
C12 |
H22 |
120.1 |
120.2 |
C12 |
C11 |
H23 |
119.1 |
119.5 |
C27 |
C25 |
H11 |
109.5 |
109.5 |
C27 |
C25 |
H12 |
109.5 |
109.5 |
C21 |
C22 |
N23 |
114.5 |
109.5 |
C22 |
C21 |
H2 |
110.8 |
109.5 |
C22 |
C21 |
H3 |
110.8 |
109.5 |
C21 |
C22 |
H4 |
108.2 |
109.5 |
C21 |
C22 |
H5 |
108.2 |
109.5 |
C10 |
C11 |
H23 |
119.1 |
119.5 |
O26 |
C24 |
H9 |
109.2 |
109.5 |
O26 |
C24 |
H10 |
109.2 |
109.5 |
C22 |
N23 |
C28 |
113.8 |
111.0 |
N23 |
C22 |
H4 |
108.2 |
109.5 |
N23 |
C22 |
H5 |
108.2 |
109.5 |
N23 |
C28 |
C24 |
107.6 |
109.2 |
N23 |
C28 |
H7 |
109.9 |
109.5 |
N23 |
C28 |
H8 |
109.9 |
109.5 |
C24 |
C28 |
H7 |
109.9 |
109.5 |
C24 |
C28 |
H8 |
109.9 |
109.5 |
C28 |
C24 |
H9 |
109.2 |
109.5 |
C28 |
C24 |
H10 |
109.2 |
109.5 |
H2 |
C21 |
H3 |
109.4 |
109.5 |
H4 |
C22 |
H5 |
109.4 |
109.4 |
H7 |
C28 |
H8 |
109.5 |
109.6 |
H9 |
C24 |
H10 |
109.5 |
109.6 |
H11 |
C25 |
H12 |
109.5 |
109.5 |
H13 |
C27 |
H14 |
109.5 |
109.5 |
H19 |
C1 |
H20 |
109.5 |
109.5 |
H19 |
C1 |
H21 |
109.5 |
109.5 |
H20 |
C1 |
H21 |
109.5 |
109.4 |
Torsion Angles for 0O5
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
C5 |
180.1 |
179.8 |
C1 |
C2 |
C3 |
H26 |
0.1 |
0.0 |
C2 |
N6 |
C4 |
C7 |
359.8 |
0.2 |
N6 |
C4 |
C7 |
C12 |
179.9 |
179.7 |
C14 |
C17 |
C13 |
C16 |
359.0 |
0.3 |
C9 |
C14 |
C17 |
H15 |
179.8 |
180.1 |
C14 |
C9 |
C15 |
H18 |
177.4 |
180.3 |
C17 |
C13 |
C16 |
H17 |
180.5 |
179.7 |
C2 |
C3 |
C5 |
H26 |
180.0 |
180.2 |
C3 |
C5 |
C8 |
H25 |
359.2 |
360.0 |
O19 |
C18 |
N20 |
C21 |
1.2 |
0.0 |
O19 |
C18 |
N20 |
H1 |
181.2 |
180.1 |
C4 |
C9 |
C14 |
H16 |
358.5 |
360.0 |
C4 |
C9 |
C15 |
H18 |
0.8 |
0.0 |
C4 |
C7 |
C12 |
C11 |
180.1 |
180.0 |
C4 |
C7 |
C12 |
H22 |
0.1 |
0.0 |
C15 |
C9 |
C14 |
H16 |
182.0 |
179.7 |
C9 |
C15 |
C16 |
H17 |
181.3 |
180.0 |
C13 |
C18 |
N20 |
H1 |
1.0 |
0.2 |
C15 |
C16 |
C13 |
H17 |
180.0 |
180.0 |
C2 |
C3 |
C5 |
C7 |
359.6 |
0.2 |
C5 |
C7 |
C12 |
H22 |
179.9 |
180.0 |
C2 |
C3 |
C5 |
C8 |
179.5 |
180.3 |
C5 |
C8 |
C10 |
H24 |
180.8 |
180.0 |
C18 |
N20 |
C21 |
C22 |
130.8 |
180.0 |
C21 |
N20 |
C18 |
H1 |
180.0 |
179.9 |
C18 |
N20 |
C21 |
H2 |
250.0 |
300.1 |
C18 |
N20 |
C21 |
H3 |
11.7 |
60.0 |
C11 |
C12 |
C7 |
H22 |
180.0 |
180.0 |
C7 |
C12 |
C11 |
H23 |
179.9 |
180.1 |
C14 |
C9 |
C15 |
C16 |
357.5 |
0.3 |
C13 |
C16 |
C15 |
H17 |
180.0 |
180.0 |
C8 |
C10 |
C11 |
H23 |
179.7 |
180.0 |
C18 |
N20 |
C21 |
H1 |
180.0 |
180.1 |
N20 |
C21 |
C22 |
N23 |
211.8 |
180.0 |
C22 |
C21 |
N20 |
H2 |
240.8 |
239.9 |
C22 |
C21 |
N20 |
H3 |
119.2 |
120.0 |
N20 |
C21 |
C22 |
H4 |
332.6 |
300.1 |
N20 |
C21 |
C22 |
H5 |
91.0 |
60.0 |
H2 |
C21 |
N20 |
H3 |
238.3 |
240.0 |
C7 |
C12 |
C11 |
H22 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H23 |
180.0 |
180.0 |
H11 |
C25 |
C27 |
H12 |
239.9 |
120.0 |
C27 |
N23 |
C22 |
H4 |
313.3 |
173.7 |
C27 |
N23 |
C22 |
H5 |
194.8 |
53.7 |
C27 |
N23 |
C28 |
H7 |
182.6 |
178.5 |
C27 |
N23 |
C28 |
H8 |
303.2 |
298.7 |
C22 |
C21 |
N20 |
H1 |
310.8 |
359.9 |
N20 |
C21 |
C22 |
H2 |
119.2 |
120.1 |
N20 |
C21 |
C22 |
H3 |
240.8 |
240.1 |
C21 |
C22 |
N23 |
C28 |
308.7 |
170.0 |
N23 |
C22 |
C21 |
H4 |
239.2 |
240.0 |
N23 |
C22 |
C21 |
H5 |
120.8 |
120.0 |
H2 |
C21 |
C22 |
H3 |
121.6 |
120.0 |
H4 |
C22 |
C21 |
H5 |
241.5 |
240.1 |
C10 |
C11 |
C12 |
H22 |
179.9 |
180.0 |
C12 |
C11 |
C10 |
H23 |
180.0 |
180.0 |
C25 |
O26 |
C24 |
H9 |
175.0 |
298.8 |
C25 |
O26 |
C24 |
H10 |
294.8 |
178.6 |
O26 |
C24 |
C28 |
H7 |
184.3 |
183.2 |
O26 |
C24 |
C28 |
H8 |
63.8 |
63.1 |
C28 |
C24 |
O26 |
H9 |
239.9 |
119.9 |
C28 |
C24 |
O26 |
H10 |
120.1 |
240.1 |
H9 |
C24 |
O26 |
H10 |
240.3 |
120.2 |
N23 |
C22 |
C21 |
H2 |
92.6 |
60.0 |
N23 |
C22 |
C21 |
H3 |
331.0 |
300.0 |
C21 |
C22 |
N23 |
H4 |
120.7 |
120.0 |
C21 |
C22 |
N23 |
H5 |
239.2 |
240.0 |
C22 |
N23 |
C28 |
C24 |
189.9 |
182.4 |
C22 |
N23 |
C28 |
H7 |
309.6 |
302.3 |
C22 |
N23 |
C28 |
H8 |
70.2 |
62.5 |
H4 |
C22 |
N23 |
H5 |
118.5 |
120.0 |
C28 |
N23 |
C22 |
H4 |
188.0 |
50.0 |
C28 |
N23 |
C22 |
H5 |
69.5 |
290.0 |
C24 |
C28 |
N23 |
H7 |
240.3 |
240.1 |
C24 |
C28 |
N23 |
H8 |
119.7 |
119.9 |
N23 |
C28 |
C24 |
H9 |
183.9 |
63.1 |
N23 |
C28 |
C24 |
H10 |
64.2 |
183.2 |
H7 |
C28 |
N23 |
H8 |
239.4 |
239.8 |
O26 |
C24 |
C28 |
H9 |
120.1 |
240.1 |
O26 |
C24 |
C28 |
H10 |
239.9 |
119.9 |
N23 |
C28 |
C24 |
H7 |
119.7 |
119.9 |
N23 |
C28 |
C24 |
H8 |
240.3 |
240.1 |
H7 |
C28 |
C24 |
H8 |
120.6 |
120.2 |
H9 |
C24 |
C28 |
H10 |
119.7 |
239.9 |
C18 |
N20 |
H1 |
C21 |
180.0 |
179.9 |
H1 |
N20 |
C21 |
C22 |
310.8 |
359.9 |
H1 |
N20 |
C21 |
H2 |
70.0 |
120.0 |
H1 |
N20 |
C21 |
H3 |
191.7 |
240.0 |
N20 |
C21 |
H2 |
C22 |
244.9 |
239.9 |
H2 |
C21 |
N20 |
H1 |
70.0 |
120.0 |
N20 |
C21 |
H2 |
H3 |
122.5 |
120.0 |
H2 |
C21 |
C22 |
N23 |
92.6 |
60.0 |
C22 |
C21 |
H2 |
H3 |
237.6 |
240.0 |
H2 |
C21 |
C22 |
H4 |
213.4 |
180.0 |
H2 |
C21 |
C22 |
H5 |
331.8 |
299.9 |
N20 |
C21 |
H3 |
C22 |
115.1 |
120.0 |
H3 |
C21 |
N20 |
H1 |
191.7 |
240.0 |
N20 |
C21 |
H3 |
H2 |
237.5 |
240.0 |
H3 |
C21 |
C22 |
N23 |
331.0 |
300.0 |
C22 |
C21 |
H3 |
H2 |
122.4 |
120.0 |
H3 |
C21 |
C22 |
H4 |
91.7 |
60.0 |
H3 |
C21 |
C22 |
H5 |
210.2 |
180.0 |
C21 |
C22 |
H4 |
N23 |
235.4 |
240.0 |
H4 |
C22 |
C21 |
H2 |
213.4 |
180.0 |
H4 |
C22 |
C21 |
H3 |
91.7 |
60.0 |
C21 |
C22 |
H4 |
H5 |
117.7 |
120.0 |
H4 |
C22 |
N23 |
C28 |
188.0 |
50.0 |
N23 |
C22 |
H4 |
H5 |
242.3 |
240.0 |
C21 |
C22 |
H5 |
N23 |
124.6 |
120.0 |
H5 |
C22 |
C21 |
H2 |
331.8 |
299.9 |
H5 |
C22 |
C21 |
H3 |
210.2 |
180.0 |
C21 |
C22 |
H5 |
H4 |
242.3 |
240.0 |
H5 |
C22 |
N23 |
C28 |
69.5 |
290.0 |
N23 |
C22 |
H5 |
H4 |
117.7 |
120.0 |
N23 |
C28 |
H7 |
C24 |
241.7 |
240.3 |
N23 |
C28 |
H7 |
H8 |
120.8 |
120.2 |
C24 |
C28 |
H7 |
H8 |
239.2 |
239.9 |
H7 |
C28 |
C24 |
H9 |
64.2 |
303.2 |
H7 |
C28 |
C24 |
H10 |
304.5 |
63.3 |
N23 |
C28 |
H8 |
C24 |
118.3 |
119.7 |
N23 |
C28 |
H8 |
H7 |
239.2 |
239.8 |
C24 |
C28 |
H8 |
H7 |
120.8 |
120.1 |
H8 |
C28 |
C24 |
H9 |
303.6 |
183.0 |
H8 |
C28 |
C24 |
H10 |
183.9 |
303.1 |
O26 |
C24 |
H9 |
H10 |
119.6 |
239.8 |
H9 |
C24 |
C28 |
H7 |
64.2 |
303.2 |
H9 |
C24 |
C28 |
H8 |
303.6 |
183.0 |
C28 |
C24 |
H9 |
H10 |
240.5 |
120.1 |
O26 |
C24 |
H10 |
H9 |
240.4 |
120.1 |
H10 |
C24 |
C28 |
H7 |
304.5 |
63.3 |
H10 |
C24 |
C28 |
H8 |
183.9 |
303.1 |
C28 |
C24 |
H10 |
H9 |
119.5 |
239.9 |
C27 |
C25 |
H11 |
H12 |
120.1 |
240.0 |
C27 |
C25 |
H12 |
H11 |
239.9 |
120.0 |
H13 |
C27 |
C25 |
H11 |
299.6 |
177.0 |
H13 |
C27 |
C25 |
H12 |
59.7 |
56.9 |
H14 |
C27 |
C25 |
H11 |
60.4 |
56.8 |
H14 |
C27 |
C25 |
H12 |
180.5 |
296.8 |
H15 |
C17 |
C13 |
C16 |
179.0 |
180.3 |
H16 |
C14 |
C17 |
H15 |
359.8 |
0.1 |
H16 |
C14 |
C9 |
C15 |
182.0 |
179.7 |
H18 |
C15 |
C16 |
H17 |
1.3 |
360.0 |
H19 |
C1 |
C2 |
C3 |
180.0 |
270.0 |
H20 |
C1 |
H19 |
H21 |
120.0 |
119.9 |
H20 |
C1 |
C2 |
C3 |
300.0 |
30.0 |
H19 |
C1 |
H20 |
H21 |
240.0 |
240.1 |
H21 |
C1 |
C2 |
C3 |
60.0 |
150.0 |
H19 |
C1 |
H21 |
H20 |
120.0 |
119.9 |
C7 |
C12 |
H22 |
C11 |
180.0 |
180.0 |
H22 |
C12 |
C11 |
H23 |
359.9 |
0.0 |
H23 |
C11 |
C12 |
H22 |
359.9 |
0.0 |
H24 |
C10 |
C11 |
H23 |
359.7 |
359.9 |
H25 |
C8 |
C10 |
H24 |
0.8 |
0.0 |
C2 |
C3 |
H26 |
C5 |
180.0 |
179.8 |