PDB Chemical Component 0O1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0O1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C19 |
C21 |
1.390 |
1.383 |
| C19 |
C17 |
1.391 |
1.382 |
| C21 |
C20 |
1.390 |
1.382 |
| C17 |
C18 |
1.390 |
1.382 |
| C20 |
C16 |
1.389 |
1.383 |
| C18 |
C16 |
1.390 |
1.382 |
| C16 |
C15 |
1.516 |
1.507 |
| C15 |
C13 |
1.529 |
1.531 |
| C13 |
N6 |
1.452 |
1.465 |
| C25 |
C23 |
1.518 |
1.549 |
| C25 |
C24 |
1.531 |
1.549 |
| N6 |
C12 |
1.358 |
1.379 |
| C23 |
C14 |
1.530 |
1.542 |
| C24 |
C22 |
1.514 |
1.543 |
| C14 |
C22 |
1.539 |
1.539 |
| C14 |
C1 |
1.545 |
1.530 |
| C12 |
N4 |
1.378 |
1.368 |
| C12 |
N5 |
1.309 |
1.308 |
| N1 |
C1 |
1.470 |
1.469 |
| N1 |
C2 |
1.473 |
1.469 |
| N4 |
C11 |
1.377 |
1.384 |
| N5 |
C10 |
1.369 |
1.362 |
| C2 |
C3 |
1.548 |
1.530 |
| C11 |
C10 |
1.384 |
1.411 |
| C11 |
C4 |
1.409 |
1.383 |
| C3 |
C4 |
1.515 |
1.507 |
| C10 |
C9 |
1.399 |
1.391 |
| C4 |
C5 |
1.421 |
1.393 |
| C9 |
C8 |
1.396 |
1.392 |
| C5 |
C8 |
1.405 |
1.417 |
| C5 |
N2 |
1.419 |
1.357 |
| C8 |
C7 |
1.467 |
1.469 |
| N2 |
C6 |
1.300 |
1.308 |
| C7 |
O1 |
1.228 |
1.218 |
| C7 |
N3 |
1.385 |
1.353 |
| C6 |
N3 |
1.368 |
1.365 |
| C6 |
N7 |
1.368 |
1.373 |
| C1 |
H1 |
1.100 |
1.091 |
| C1 |
H2 |
1.100 |
1.089 |
| N1 |
H3 |
1.000 |
1.009 |
| C2 |
H5 |
1.100 |
1.089 |
| C2 |
H6 |
1.100 |
1.089 |
| C3 |
H7 |
1.100 |
1.090 |
| C3 |
H8 |
1.100 |
1.089 |
| N3 |
H9 |
1.000 |
0.971 |
| C9 |
H10 |
1.079 |
1.080 |
| N4 |
H11 |
1.000 |
0.970 |
| N6 |
H13 |
1.000 |
0.970 |
| C13 |
H14 |
1.100 |
1.089 |
| C13 |
H15 |
1.100 |
1.089 |
| C14 |
H16 |
1.100 |
1.090 |
| N7 |
H17 |
1.000 |
0.971 |
| N7 |
H18 |
1.000 |
0.970 |
| C15 |
H19 |
1.100 |
1.090 |
| C15 |
H20 |
1.100 |
1.090 |
| C17 |
H21 |
1.080 |
1.080 |
| C18 |
H22 |
1.080 |
1.080 |
| C19 |
H23 |
1.080 |
1.080 |
| C20 |
H24 |
1.080 |
1.079 |
| C21 |
H25 |
1.080 |
1.080 |
| C22 |
H26 |
1.100 |
1.089 |
| C22 |
H27 |
1.100 |
1.089 |
| C23 |
H28 |
1.100 |
1.090 |
| C23 |
H29 |
1.100 |
1.089 |
| C24 |
H30 |
1.100 |
1.089 |
| C24 |
H31 |
1.100 |
1.090 |
| C25 |
H32 |
1.101 |
1.089 |
| C25 |
H33 |
1.100 |
1.091 |
Bond Angles for 0O1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C19 |
C21 |
C20 |
120.0 |
120.0 |
| C21 |
C19 |
H23 |
120.0 |
120.0 |
| C19 |
C21 |
H25 |
120.0 |
120.0 |
| C19 |
C17 |
H21 |
120.0 |
120.0 |
| C21 |
C20 |
H24 |
120.0 |
120.1 |
| C18 |
C17 |
H21 |
120.0 |
120.0 |
| C17 |
C18 |
H22 |
120.0 |
120.0 |
| C16 |
C15 |
H19 |
109.4 |
109.5 |
| C16 |
C15 |
H20 |
109.4 |
109.5 |
| C15 |
C13 |
H14 |
109.4 |
109.5 |
| C15 |
C13 |
H15 |
109.4 |
109.4 |
| C13 |
N6 |
H13 |
106.9 |
120.0 |
| C25 |
C23 |
H28 |
109.9 |
110.4 |
| C25 |
C23 |
H29 |
109.9 |
110.6 |
| C25 |
C24 |
H30 |
110.7 |
110.5 |
| C25 |
C24 |
H31 |
110.7 |
110.5 |
| C23 |
C14 |
H16 |
110.8 |
110.1 |
| C24 |
C22 |
H26 |
110.6 |
110.0 |
| C24 |
C22 |
H27 |
110.6 |
110.1 |
| C22 |
C14 |
H16 |
110.7 |
110.0 |
| C14 |
C22 |
H26 |
110.6 |
110.1 |
| C14 |
C22 |
H27 |
110.6 |
110.0 |
| C14 |
C1 |
H1 |
108.8 |
109.5 |
| C14 |
C1 |
H2 |
108.7 |
109.5 |
| C12 |
N4 |
H11 |
126.7 |
126.3 |
| N1 |
C1 |
H1 |
108.8 |
109.4 |
| N1 |
C1 |
H2 |
108.8 |
109.5 |
| N1 |
C2 |
C3 |
109.0 |
109.5 |
| C2 |
N1 |
H3 |
109.0 |
111.0 |
| N1 |
C2 |
H5 |
109.6 |
109.5 |
| N1 |
C2 |
H6 |
109.6 |
109.5 |
| C2 |
C3 |
C4 |
117.0 |
109.5 |
| C3 |
C2 |
H5 |
109.6 |
109.4 |
| C3 |
C2 |
H6 |
109.6 |
109.5 |
| C2 |
C3 |
H7 |
107.5 |
109.5 |
| C2 |
C3 |
H8 |
107.5 |
109.5 |
| C3 |
C4 |
C5 |
126.3 |
120.2 |
| C4 |
C3 |
H7 |
107.6 |
109.5 |
| C4 |
C3 |
H8 |
107.6 |
109.5 |
| C10 |
C9 |
H10 |
121.4 |
120.3 |
| C4 |
C5 |
C8 |
121.0 |
119.7 |
| C4 |
C5 |
N2 |
119.7 |
121.2 |
| N2 |
C5 |
C8 |
119.3 |
119.0 |
| C5 |
C8 |
C7 |
119.5 |
118.1 |
| C5 |
N2 |
C6 |
119.7 |
121.5 |
| C8 |
C7 |
O1 |
123.5 |
121.2 |
| N2 |
C6 |
N3 |
123.7 |
123.1 |
| N2 |
C6 |
N7 |
119.4 |
118.5 |
| C7 |
N3 |
H9 |
119.1 |
119.7 |
| N3 |
C6 |
N7 |
116.8 |
118.4 |
| C6 |
N3 |
H9 |
119.1 |
119.7 |
| C6 |
N7 |
H17 |
120.0 |
120.0 |
| C6 |
N7 |
H18 |
120.0 |
120.0 |
| H1 |
C1 |
H2 |
109.5 |
109.5 |
| H5 |
C2 |
H6 |
109.5 |
109.5 |
| H7 |
C3 |
H8 |
109.5 |
109.4 |
| H14 |
C13 |
H15 |
109.5 |
109.5 |
| H17 |
N7 |
H18 |
120.0 |
120.0 |
| H19 |
C15 |
H20 |
109.5 |
109.5 |
| H26 |
C22 |
H27 |
109.5 |
110.0 |
| H28 |
C23 |
H29 |
109.5 |
110.5 |
| H30 |
C24 |
H31 |
109.5 |
110.5 |
| H32 |
C25 |
H33 |
109.5 |
110.8 |
Torsion Angles for 0O1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C21 |
C19 |
C17 |
H21 |
180.0 |
179.7 |
| C19 |
C21 |
C20 |
H24 |
180.0 |
180.0 |
| C18 |
C17 |
C19 |
H21 |
180.0 |
180.1 |
| C19 |
C17 |
C18 |
H22 |
180.0 |
180.0 |
| C20 |
C21 |
C19 |
H23 |
180.0 |
180.0 |
| C19 |
C21 |
C20 |
H25 |
180.0 |
179.8 |
| C19 |
C17 |
C18 |
H21 |
180.0 |
179.9 |
| C20 |
C16 |
C15 |
H19 |
32.2 |
149.7 |
| C20 |
C16 |
C15 |
H20 |
152.1 |
29.7 |
| C18 |
C16 |
C15 |
H19 |
212.2 |
330.0 |
| C18 |
C16 |
C15 |
H20 |
332.0 |
210.0 |
| C16 |
C15 |
C13 |
H14 |
283.2 |
60.0 |
| C16 |
C15 |
C13 |
H15 |
43.1 |
299.9 |
| H19 |
C15 |
C16 |
H20 |
240.2 |
120.0 |
| C15 |
C13 |
N6 |
H13 |
278.3 |
0.0 |
| H14 |
C13 |
C15 |
H15 |
240.1 |
120.0 |
| C25 |
C23 |
C14 |
H16 |
98.7 |
95.7 |
| H28 |
C23 |
C25 |
H29 |
239.4 |
122.6 |
| C24 |
C25 |
C23 |
H28 |
118.7 |
279.2 |
| C24 |
C25 |
C23 |
H29 |
239.2 |
156.6 |
| C25 |
C24 |
C22 |
H26 |
84.5 |
264.3 |
| C25 |
C24 |
C22 |
H27 |
205.9 |
142.9 |
| H30 |
C24 |
C25 |
H31 |
238.4 |
122.6 |
| N6 |
C12 |
N4 |
H11 |
359.8 |
360.0 |
| C22 |
C14 |
C23 |
H16 |
241.3 |
240.8 |
| C23 |
C14 |
C22 |
H26 |
274.6 |
119.2 |
| C23 |
C14 |
C22 |
H27 |
153.2 |
240.6 |
| C23 |
C14 |
C1 |
H1 |
56.2 |
172.2 |
| C23 |
C14 |
C1 |
H2 |
175.4 |
52.2 |
| C24 |
C22 |
C14 |
H16 |
275.2 |
240.6 |
| C14 |
C22 |
C24 |
H26 |
240.7 |
119.3 |
| C14 |
C22 |
C24 |
H27 |
119.3 |
240.7 |
| H26 |
C22 |
C24 |
H27 |
238.6 |
121.4 |
| C23 |
C14 |
C22 |
H16 |
118.8 |
119.3 |
| C24 |
C22 |
C14 |
H26 |
119.3 |
240.7 |
| C24 |
C22 |
C14 |
H27 |
240.7 |
119.3 |
| C22 |
C14 |
C1 |
H1 |
302.1 |
55.0 |
| C22 |
C14 |
C1 |
H2 |
61.3 |
295.0 |
| H26 |
C22 |
C14 |
H27 |
121.4 |
238.6 |
| N1 |
C1 |
C14 |
H1 |
239.6 |
120.0 |
| N1 |
C1 |
C14 |
H2 |
120.4 |
240.0 |
| H1 |
C1 |
C14 |
H2 |
240.8 |
120.0 |
| N5 |
C12 |
N4 |
H11 |
180.0 |
180.2 |
| C14 |
C1 |
N1 |
H1 |
120.4 |
240.0 |
| C14 |
C1 |
N1 |
H2 |
239.6 |
120.0 |
| H1 |
C1 |
N1 |
H2 |
119.2 |
240.0 |
| C2 |
N1 |
C1 |
H1 |
54.1 |
300.0 |
| C2 |
N1 |
C1 |
H2 |
294.9 |
60.0 |
| N1 |
C2 |
C3 |
C4 |
204.0 |
180.0 |
| C3 |
C2 |
N1 |
H5 |
240.1 |
240.0 |
| C3 |
C2 |
N1 |
H6 |
119.9 |
120.0 |
| N1 |
C2 |
C3 |
H7 |
325.0 |
300.0 |
| N1 |
C2 |
C3 |
H8 |
82.9 |
60.0 |
| H5 |
C2 |
N1 |
H6 |
239.9 |
240.0 |
| N5 |
C10 |
C9 |
H10 |
359.6 |
360.0 |
| C3 |
C2 |
N1 |
H3 |
174.0 |
56.1 |
| N1 |
C2 |
C3 |
H5 |
120.0 |
120.0 |
| N1 |
C2 |
C3 |
H6 |
240.1 |
240.0 |
| C2 |
C3 |
C4 |
C5 |
261.1 |
90.0 |
| C4 |
C3 |
C2 |
H7 |
238.9 |
240.0 |
| C4 |
C3 |
C2 |
H8 |
121.1 |
120.0 |
| H5 |
C2 |
C3 |
H6 |
120.1 |
120.0 |
| H7 |
C3 |
C2 |
H8 |
242.1 |
240.0 |
| C11 |
C10 |
C9 |
H10 |
179.4 |
179.7 |
| C11 |
C4 |
C3 |
H7 |
309.7 |
149.7 |
| C11 |
C4 |
C3 |
H8 |
191.8 |
29.7 |
| C4 |
C3 |
C2 |
H5 |
84.0 |
60.0 |
| C4 |
C3 |
C2 |
H6 |
323.9 |
300.0 |
| C2 |
C3 |
C4 |
H7 |
121.1 |
120.0 |
| C2 |
C3 |
C4 |
H8 |
238.9 |
240.0 |
| C3 |
C4 |
C5 |
C8 |
169.6 |
180.0 |
| C3 |
C4 |
C5 |
N2 |
350.4 |
0.1 |
| H7 |
C3 |
C4 |
H8 |
117.9 |
120.0 |
| C5 |
C4 |
C3 |
H7 |
140.1 |
330.0 |
| C5 |
C4 |
C3 |
H8 |
22.2 |
210.0 |
| N2 |
C5 |
C4 |
C8 |
180.8 |
180.1 |
| C4 |
C5 |
C8 |
C7 |
179.7 |
180.0 |
| C4 |
C5 |
N2 |
C6 |
180.4 |
180.0 |
| C9 |
C8 |
C7 |
O1 |
359.5 |
0.0 |
| C4 |
C5 |
C8 |
N2 |
180.8 |
180.1 |
| C8 |
C5 |
N2 |
C6 |
1.2 |
0.1 |
| C5 |
C8 |
C7 |
O1 |
180.2 |
180.1 |
| C4 |
C5 |
N2 |
C8 |
179.2 |
179.9 |
| N2 |
C5 |
C8 |
C7 |
358.9 |
359.9 |
| C5 |
N2 |
C6 |
N3 |
359.7 |
360.0 |
| C5 |
N2 |
C6 |
N7 |
179.0 |
179.9 |
| C8 |
C7 |
N3 |
H9 |
180.8 |
180.0 |
| C6 |
N2 |
C5 |
C8 |
1.2 |
0.1 |
| N3 |
C6 |
N2 |
N7 |
180.7 |
180.0 |
| N2 |
C6 |
N3 |
H9 |
179.2 |
180.0 |
| N2 |
C6 |
N7 |
H17 |
0.0 |
360.0 |
| N2 |
C6 |
N7 |
H18 |
180.0 |
180.0 |
| O1 |
C7 |
N3 |
H9 |
0.7 |
360.0 |
| C5 |
C8 |
C7 |
N3 |
0.2 |
0.0 |
| C7 |
N3 |
C6 |
N7 |
180.0 |
180.0 |
| C6 |
N3 |
C7 |
H9 |
180.0 |
180.0 |
| N2 |
C6 |
N3 |
N7 |
179.3 |
180.0 |
| C7 |
N3 |
C6 |
H9 |
180.0 |
180.0 |
| N3 |
C6 |
N7 |
H17 |
179.3 |
179.9 |
| N3 |
C6 |
N7 |
H18 |
359.3 |
360.0 |
| N2 |
C6 |
N7 |
N3 |
180.7 |
180.0 |
| N7 |
C6 |
N3 |
H9 |
360.0 |
360.0 |
| H17 |
N7 |
C6 |
H18 |
180.0 |
179.9 |
| C14 |
C1 |
H1 |
H2 |
118.7 |
240.0 |
| N1 |
C1 |
H1 |
H2 |
241.2 |
120.0 |
| C14 |
C1 |
H2 |
H1 |
241.3 |
120.0 |
| N1 |
C1 |
H2 |
H1 |
118.7 |
240.0 |
| H3 |
N1 |
C1 |
H1 |
174.3 |
64.0 |
| H3 |
N1 |
C1 |
H2 |
55.1 |
184.0 |
| H3 |
N1 |
C2 |
C3 |
174.0 |
56.1 |
| H3 |
N1 |
C2 |
H5 |
293.9 |
176.0 |
| H3 |
N1 |
C2 |
H6 |
54.0 |
296.0 |
| N1 |
C2 |
H5 |
C3 |
240.4 |
240.0 |
| H5 |
C2 |
N1 |
H3 |
293.9 |
176.0 |
| N1 |
C2 |
H5 |
H6 |
120.2 |
120.0 |
| H5 |
C2 |
C3 |
C4 |
84.0 |
60.0 |
| C3 |
C2 |
H5 |
H6 |
239.8 |
240.0 |
| H5 |
C2 |
C3 |
H7 |
205.1 |
180.0 |
| H5 |
C2 |
C3 |
H8 |
322.9 |
300.0 |
| N1 |
C2 |
H6 |
C3 |
119.6 |
120.0 |
| H6 |
C2 |
N1 |
H3 |
54.0 |
296.0 |
| N1 |
C2 |
H6 |
H5 |
239.8 |
240.0 |
| H6 |
C2 |
C3 |
C4 |
323.9 |
300.0 |
| C3 |
C2 |
H6 |
H5 |
120.2 |
120.0 |
| H6 |
C2 |
C3 |
H7 |
84.9 |
60.0 |
| H6 |
C2 |
C3 |
H8 |
202.8 |
180.0 |
| C2 |
C3 |
H7 |
C4 |
233.2 |
240.0 |
| H7 |
C3 |
C2 |
H5 |
205.1 |
180.0 |
| H7 |
C3 |
C2 |
H6 |
84.9 |
60.0 |
| C2 |
C3 |
H7 |
H8 |
116.6 |
120.0 |
| H7 |
C3 |
C4 |
C5 |
140.1 |
330.0 |
| C4 |
C3 |
H7 |
H8 |
243.4 |
240.0 |
| C2 |
C3 |
H8 |
C4 |
126.8 |
120.0 |
| H8 |
C3 |
C2 |
H5 |
322.9 |
300.0 |
| H8 |
C3 |
C2 |
H6 |
202.8 |
180.0 |
| C2 |
C3 |
H8 |
H7 |
243.4 |
240.0 |
| H8 |
C3 |
C4 |
C5 |
22.2 |
210.0 |
| C4 |
C3 |
H8 |
H7 |
116.6 |
120.0 |
| H9 |
N3 |
C6 |
N7 |
360.0 |
360.0 |
| C15 |
C13 |
H14 |
H15 |
119.9 |
240.0 |
| H14 |
C13 |
N6 |
H13 |
158.3 |
120.0 |
| C15 |
C13 |
H15 |
H14 |
240.1 |
120.0 |
| H15 |
C13 |
N6 |
H13 |
38.4 |
240.1 |
| H16 |
C14 |
C22 |
H26 |
155.9 |
359.9 |
| H16 |
C14 |
C22 |
H27 |
34.5 |
121.3 |
| H16 |
C14 |
C1 |
H1 |
179.9 |
293.6 |
| H16 |
C14 |
C1 |
H2 |
299.1 |
173.7 |
| C6 |
N7 |
H17 |
H18 |
180.0 |
180.1 |
| C6 |
N7 |
H18 |
H17 |
180.0 |
179.9 |
| C16 |
C15 |
H19 |
H20 |
119.8 |
240.0 |
| H19 |
C15 |
C13 |
H14 |
163.1 |
180.0 |
| H19 |
C15 |
C13 |
H15 |
283.0 |
60.0 |
| C16 |
C15 |
H20 |
H19 |
240.2 |
120.0 |
| H20 |
C15 |
C13 |
H14 |
43.3 |
300.0 |
| H20 |
C15 |
C13 |
H15 |
163.2 |
180.0 |
| H21 |
C17 |
C18 |
H22 |
0.0 |
0.0 |
| H22 |
C18 |
C17 |
H21 |
0.0 |
0.0 |
| H23 |
C19 |
C21 |
C20 |
180.0 |
180.0 |
| H23 |
C19 |
C21 |
H25 |
360.0 |
359.8 |
| H23 |
C19 |
C17 |
H21 |
0.0 |
360.0 |
| C19 |
C21 |
H25 |
C20 |
180.0 |
180.2 |
| H25 |
C21 |
C19 |
H23 |
360.0 |
359.8 |
| H25 |
C21 |
C20 |
H24 |
0.0 |
0.2 |
| C24 |
C22 |
H26 |
H27 |
122.1 |
238.6 |
| H26 |
C22 |
C14 |
H16 |
155.9 |
359.9 |
| C14 |
C22 |
H26 |
H27 |
237.9 |
121.4 |
| C24 |
C22 |
H27 |
H26 |
237.9 |
121.4 |
| H27 |
C22 |
C14 |
H16 |
34.5 |
121.3 |
| C14 |
C22 |
H27 |
H26 |
122.1 |
238.5 |
| C25 |
C23 |
H28 |
H29 |
120.8 |
237.3 |
| H28 |
C23 |
C14 |
H16 |
339.0 |
214.3 |
| C25 |
C23 |
H29 |
H28 |
239.1 |
122.6 |
| H29 |
C23 |
C14 |
H16 |
218.4 |
336.9 |
| C25 |
C24 |
H30 |
H31 |
122.4 |
237.4 |
| H30 |
C24 |
C22 |
H26 |
325.3 |
23.0 |
| H30 |
C24 |
C22 |
H27 |
86.7 |
261.5 |
| C25 |
C24 |
H31 |
H30 |
237.6 |
122.6 |
| H31 |
C24 |
C22 |
H26 |
203.7 |
145.5 |
| H31 |
C24 |
C22 |
H27 |
325.1 |
24.1 |
| H32 |
C25 |
C23 |
H28 |
238.2 |
37.6 |
| H32 |
C25 |
C23 |
H29 |
358.8 |
275.0 |
| H32 |
C25 |
C24 |
H30 |
21.8 |
85.1 |
| H32 |
C25 |
C24 |
H31 |
143.4 |
322.5 |
| H33 |
C25 |
C23 |
H28 |
359.1 |
161.0 |
| H33 |
C25 |
C23 |
H29 |
119.7 |
38.4 |
| H33 |
C25 |
C24 |
H30 |
260.9 |
321.7 |
| H33 |
C25 |
C24 |
H31 |
22.6 |
199.1 |