PDB Chemical Component 0ND
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 0ND
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N18 |
N19 |
1.362 |
1.283 |
| N18 |
N17 |
1.365 |
1.289 |
| N19 |
C15 |
1.347 |
1.316 |
| N17 |
N16 |
1.364 |
1.406 |
| C15 |
N16 |
1.352 |
1.356 |
| C15 |
C14 |
1.396 |
1.480 |
| C13 |
C14 |
1.405 |
1.395 |
| C13 |
C12 |
1.392 |
1.380 |
| C14 |
C20 |
1.383 |
1.395 |
| C12 |
C11 |
1.391 |
1.383 |
| C20 |
C21 |
1.377 |
1.380 |
| C11 |
C21 |
1.394 |
1.384 |
| C11 |
S08 |
1.767 |
1.762 |
| O09 |
S08 |
1.426 |
1.421 |
| C21 |
CL2 |
1.737 |
1.736 |
| S08 |
O10 |
1.449 |
1.421 |
| S08 |
N07 |
1.619 |
1.656 |
| C06 |
N07 |
1.444 |
1.465 |
| C06 |
B03 |
1.577 |
1.570 |
| B03 |
O04 |
1.470 |
1.421 |
| B03 |
O05 |
1.465 |
1.419 |
| O04 |
H1 |
0.950 |
0.966 |
| O05 |
H2 |
0.950 |
0.966 |
| C06 |
H3 |
1.100 |
1.090 |
| C06 |
H4 |
1.100 |
1.091 |
| N07 |
H5 |
1.000 |
0.970 |
| C12 |
H6 |
1.080 |
1.080 |
| C13 |
H7 |
1.080 |
1.080 |
| N16 |
H8 |
1.000 |
0.970 |
| C20 |
H9 |
1.080 |
1.080 |
Bond Angles for 0ND
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N17 |
N16 |
H8 |
125.7 |
127.4 |
| C15 |
N16 |
H8 |
125.7 |
127.4 |
| C15 |
C14 |
C20 |
117.8 |
120.1 |
| C13 |
C14 |
C20 |
119.2 |
119.7 |
| C14 |
C13 |
H7 |
120.3 |
120.0 |
| C13 |
C12 |
H6 |
119.6 |
119.9 |
| C14 |
C20 |
C21 |
121.3 |
119.8 |
| C14 |
C20 |
H9 |
119.3 |
120.1 |
| C12 |
C11 |
C21 |
119.3 |
120.3 |
| C11 |
C21 |
C20 |
120.0 |
120.2 |
| C20 |
C21 |
CL2 |
118.4 |
119.9 |
| C21 |
C20 |
H9 |
119.4 |
120.1 |
| C11 |
C21 |
CL2 |
121.6 |
119.9 |
| O09 |
S08 |
O10 |
107.8 |
123.1 |
| S08 |
N07 |
H5 |
106.5 |
120.0 |
| N07 |
C06 |
H3 |
108.5 |
109.4 |
| N07 |
C06 |
H4 |
108.5 |
109.4 |
| C06 |
N07 |
H5 |
106.5 |
120.0 |
| O04 |
B03 |
O05 |
109.9 |
120.0 |
| B03 |
O04 |
H1 |
109.5 |
114.0 |
| B03 |
O05 |
H2 |
109.5 |
114.0 |
| H3 |
C06 |
H4 |
109.5 |
109.5 |
Torsion Angles for 0ND
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N18 |
N17 |
N16 |
H8 |
178.4 |
180.0 |
| N19 |
C15 |
N16 |
H8 |
182.3 |
180.2 |
| N19 |
C15 |
C14 |
C20 |
168.7 |
179.8 |
| C15 |
N16 |
N17 |
H8 |
180.0 |
180.0 |
| N17 |
N16 |
C15 |
H8 |
180.0 |
180.0 |
| N16 |
C15 |
C14 |
C20 |
353.3 |
0.0 |
| C13 |
C14 |
C15 |
C20 |
179.5 |
179.9 |
| C15 |
C14 |
C13 |
H7 |
359.8 |
0.0 |
| C15 |
C14 |
C20 |
C21 |
179.6 |
180.0 |
| C15 |
C14 |
C20 |
H9 |
359.6 |
359.9 |
| C15 |
C14 |
C13 |
C20 |
180.5 |
180.1 |
| C14 |
C13 |
C12 |
H6 |
179.9 |
180.0 |
| C13 |
C14 |
C20 |
C21 |
0.0 |
0.1 |
| C13 |
C14 |
C20 |
H9 |
180.1 |
180.0 |
| C13 |
C12 |
C11 |
C21 |
1.5 |
0.0 |
| C20 |
C14 |
C13 |
H7 |
179.3 |
179.9 |
| C11 |
C21 |
C20 |
C14 |
1.4 |
359.9 |
| C14 |
C20 |
C21 |
CL2 |
180.4 |
180.2 |
| C21 |
C20 |
C14 |
H9 |
180.0 |
180.2 |
| C12 |
C11 |
C21 |
C20 |
357.9 |
0.0 |
| C12 |
C11 |
C21 |
CL2 |
178.9 |
179.7 |
| C14 |
C20 |
C21 |
H9 |
180.0 |
179.8 |
| C11 |
C21 |
C20 |
CL2 |
180.9 |
179.7 |
| C14 |
C20 |
C21 |
C11 |
1.4 |
359.9 |
| C20 |
C21 |
C11 |
CL2 |
179.1 |
180.3 |
| C11 |
C21 |
C20 |
H9 |
181.3 |
180.1 |
| C11 |
S08 |
N07 |
H5 |
198.8 |
243.6 |
| O09 |
S08 |
N07 |
H5 |
78.8 |
357.2 |
| C11 |
C21 |
CL2 |
C20 |
179.1 |
180.3 |
| CL2 |
C21 |
C20 |
H9 |
0.4 |
0.4 |
| O10 |
S08 |
N07 |
H5 |
319.6 |
130.1 |
| S08 |
N07 |
C06 |
H3 |
305.9 |
65.0 |
| S08 |
N07 |
C06 |
H4 |
64.7 |
305.0 |
| C06 |
N07 |
S08 |
H5 |
238.4 |
179.9 |
| S08 |
N07 |
C06 |
H5 |
121.6 |
180.1 |
| H3 |
C06 |
N07 |
H4 |
241.2 |
120.0 |
| C06 |
B03 |
O04 |
H1 |
180.0 |
354.6 |
| C06 |
B03 |
O05 |
H2 |
180.0 |
180.3 |
| O04 |
B03 |
O05 |
H2 |
57.8 |
359.9 |
| O05 |
B03 |
O04 |
H1 |
302.9 |
175.0 |
| H1 |
O04 |
B03 |
O05 |
302.9 |
175.0 |
| N07 |
C06 |
H3 |
H4 |
118.2 |
240.1 |
| H3 |
C06 |
N07 |
H5 |
184.2 |
244.9 |
| N07 |
C06 |
H4 |
H3 |
241.8 |
120.0 |
| H4 |
C06 |
N07 |
H5 |
303.1 |
124.9 |
| H5 |
N07 |
C06 |
H3 |
184.2 |
244.9 |
| H5 |
N07 |
C06 |
H4 |
303.1 |
124.9 |
| H6 |
C12 |
C11 |
C21 |
181.4 |
180.1 |
| H7 |
C13 |
C14 |
C20 |
179.3 |
179.9 |
| H7 |
C13 |
C12 |
H6 |
359.9 |
359.9 |
| C14 |
C20 |
H9 |
C21 |
180.0 |
180.2 |
| H9 |
C20 |
C21 |
CL2 |
0.4 |
0.4 |